BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918834|Adiantum capillus-veneris mRNA, clone:
YMU001_000118_A08.
         (513 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6D8C5|TILS_ERWCT tRNA(Ile)-lysidine synthase OS=Erwinia caro...    26   4.2  
sp|Q752A3|TOF1_ASHGO Topoisomerase 1-associated factor 1 OS=Ashb...    30   8.5  

>sp|Q6D8C5|TILS_ERWCT tRNA(Ile)-lysidine synthase OS=Erwinia
           carotovora subsp. atroseptica GN=tilS PE=3 SV=1
          Length = 440

 Score = 26.2 bits (56), Expect(2) = 4.2
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = -3

Query: 439 LNLYQMEIRRFRQH 398
           L L QM+IRRFRQH
Sbjct: 301 LQLNQMQIRRFRQH 314



 Score = 23.5 bits (49), Expect(2) = 4.2
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = -2

Query: 395 VQIRRFRQHVLLV 357
           +QIRRFRQH+ L+
Sbjct: 306 MQIRRFRQHLYLL 318


>sp|Q752A3|TOF1_ASHGO Topoisomerase 1-associated factor 1 OS=Ashbya
           gossypii GN=TOF1 PE=3 SV=1
          Length = 1265

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 13/35 (37%), Positives = 23/35 (65%)
 Frame = +3

Query: 336 LPKSANLHQ*DVLPKSANLH*CCLNRRISIWYKFR 440
           L KS N++  D+LP + ++   CLN  +S++ KF+
Sbjct: 248 LSKSRNINTSDMLPPNISVDDICLNSVVSVFKKFK 282

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918834|Adiantum capillus-veneris mRNA, clone:
YMU001_000118_A08.
         (513 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q22MN8|Q22MN8_TETTH Putative uncharacterized protein OS=Tetra...    34   3.7  

>tr|Q22MN8|Q22MN8_TETTH Putative uncharacterized protein
           OS=Tetrahymena thermophila SB210 GN=TTHERM_00031840 PE=4
           SV=2
          Length = 1591

 Score = 34.3 bits (77), Expect = 3.7
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +1

Query: 178 INIYPFRMQIQTSVNMYPFQIQIQISFNLCTR 273
           +N+YP+ MQ  + V   P Q+ I+I+F +C R
Sbjct: 797 LNLYPYVMQNNSQVPYSPLQVSIKINFTICQR 828