BP918838
Clone id YMU001_000118_A12
Library
Length 459
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000118_A12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CAAGGAGCTCAGCACAATCCTATGTCCTGATGCTGGTACTAATATTGTTCCAGCTACAAA
CTTCTCGTCTGTGTCGATCAATGAGGGCTGAACAGACGTCTCTACCTGATTCTTCAGTGT
TACCCAGGGGCCAAGGATGTGGGTGATAGGTCGTTAAATTTGGGCATCAGCAGCACGTAA
TGGAAAGCCTCGTCCAATCAGGAGGCTCTCTTCAACCATGTCTTGAAACCAGAAGTGAAG
TTGTGGATTCTCGCTGAATGAGAATCTCAAGGATGAAAACGTCTACTTAAAACTCCAGAT
TTCAATGACGCTGAATTGTGTAGCCATTTAGAACCAGCTAGTTGAGGCTCCAAACAGAAT
AGTAGGACCTGATCATTCTATGAAGGGTTGATTCCTCTAATTGTAAAGTTTGATATGTAG
CTTGATATACCACATCCAGCACAAGCCTGGCCTGTAAGG
■■Homology search results ■■ -
sp_hit_id Q5XUX1
Definition sp|Q5XUX1|FBXW9_HUMAN F-box/WD repeat-containing protein 9 OS=Homo sapiens
Align length 58
Score (bit) 32.0
E-value 1.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918838|Adiantum capillus-veneris mRNA, clone:
YMU001_000118_A12.
(459 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5XUX1|FBXW9_HUMAN F-box/WD repeat-containing protein 9 OS=Ho... 32 1.3
sp|Q9UT00|YKH3_SCHPO Uncharacterized protein PYUK71.03c OS=Schiz... 30 5.0

>sp|Q5XUX1|FBXW9_HUMAN F-box/WD repeat-containing protein 9 OS=Homo
sapiens GN=FBXW9 PE=2 SV=2
Length = 488

Score = 32.0 bits (71), Expect = 1.3
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = -1

Query: 219 MVEESLLIGRGFPLRAADAQI*RPITHILGPWVTLKNQVETSVQPSLIDTDEKFVAGT 46
M L+G G P R +D RPITH GP + Q+ + +L+ D ++G+
Sbjct: 297 METRDALMGWGGPSRGSDIPPHRPITHEAGPALLKHQQLHSRPVLTLLADDRHIISGS 354


>sp|Q9UT00|YKH3_SCHPO Uncharacterized protein PYUK71.03c
OS=Schizosaccharomyces pombe GN=SPAPYUK71.03c PE=1 SV=1
Length = 1225

Score = 30.0 bits (66), Expect = 5.0
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Frame = -1

Query: 291 FK*TFSSLRFSFSENPQLHFW-FQDMVEESLLIGRGFPLRAADAQI*RPITHILGPWVTL 115
F TF S+ SFSEN L + F D+ + LL PL +A P+T+ +TL
Sbjct: 483 FNETFYSVLNSFSENLNLEVYDFNDIRSDKLLGSAVLPLATLEAM---PVTNDAFVELTL 539

Query: 114 KNQVETSVQPSLIDTDEKFVAGTILVPASGHRI 16
K + ++ D KF A +VP SG I
Sbjct: 540 KGKT-----VGRLNYDMKFHA---VVPDSGEEI 564


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918838|Adiantum capillus-veneris mRNA, clone:
YMU001_000118_A12.
(459 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******