BP918839
Clone id YMU001_000118_B01
Library
Length 508
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000118_B01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTGGAAGAATCGCGGCCGCAAATTCTTCCAGTTTTTTTTTTTTTTGCTTGAAAGGTTGAC
ACGGGCACATTACATCATAATTCCCTCCAAATTTAAGCACATCTGCTTGTTTCACCAGTC
CTCTTATCATTCCTCAAAAATAAAACTTCACACAAAAAACCTAGTGACAGCTTTTTGAGT
ACTTAACAAACAAGCTTTTACAGATCAAATGTGGCATACAGCACATGGATCAATCCTTTT
TCTTCTCAACCACTGTCTGAGATGTCATCCGTTAGCCTCAACAAGGCGATAGACTCTCCC
AAACCTTATGCACATCCTAAGTCCGAAGCAAAAGCTTCTGTTAAACACATGTGCCTCTAG
CACTGACAATCCCATGGACACTCCAACAAGCAAACTTAAAATACCTGGAAAAAGCAAGGT
AGAAGGTTGTTTGCTTTCTTCTGCAAGCCTTTGCTTCTTTTCACAAGCATCCAAGCAATT
TTTCATTCTTTGAACAAGCGCCGGAATG
■■Homology search results ■■ -
sp_hit_id Q5E3J6
Definition sp|Q5E3J6|NAPA_VIBF1 Periplasmic nitrate reductase OS=Vibrio fischeri (strain ATCC 700601 / ES114)
Align length 56
Score (bit) 31.2
E-value 2.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918839|Adiantum capillus-veneris mRNA, clone:
YMU001_000118_B01.
(463 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5E3J6|NAPA_VIBF1 Periplasmic nitrate reductase OS=Vibrio fis... 31 2.3
sp|P97447|FHL1_MOUSE Four and a half LIM domains protein 1 OS=Mu... 30 6.7
sp|P04821|CDC25_YEAST Cell division control protein 25 OS=Saccha... 29 8.7

>sp|Q5E3J6|NAPA_VIBF1 Periplasmic nitrate reductase OS=Vibrio
fischeri (strain ATCC 700601 / ES114) GN=napA PE=3 SV=1
Length = 829

Score = 31.2 bits (69), Expect = 2.3
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +1

Query: 115 PSDSFLST*QTSFYRSNVAYSTWINPFSSQPLSEMSSVSLNKAIDSPKPYAHPKSE 282
P+ +S+ Y+ +VA P+++Q SEMS VS I K YA PK++
Sbjct: 318 PNSGAMSSISFEEYKKSVA------PYTAQKASEMSGVSEEDLITLAKQYADPKTK 367


>sp|P97447|FHL1_MOUSE Four and a half LIM domains protein 1 OS=Mus
musculus GN=Fhl1 PE=2 SV=3
Length = 280

Score = 29.6 bits (65), Expect = 6.7
Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 4/80 (5%)
Frame = +2

Query: 152 FTDQMWHTAHGSILFLLNHCLRC----HPLASTRR*TLPNLMHILSPKQKLLLNTCASST 319
+ ++ WH ++C RC HPLAS +S K+L N CA+
Sbjct: 56 YKNRYWH----------DNCFRCAKCLHPLASET---------FVSKDGKILCNKCATRE 96

Query: 320 DNPMDTPTSKLKIPGKSKVE 379
D+P K + G VE
Sbjct: 97 DSPRCKGCFKAIVAGDQNVE 116


>sp|P04821|CDC25_YEAST Cell division control protein 25
OS=Saccharomyces cerevisiae GN=CDC25 PE=1 SV=1
Length = 1589

Score = 29.3 bits (64), Expect = 8.7
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +1

Query: 151 FYRSNVAYSTWINPFSSQPLSEMSSVSLNKAIDSPKPYAHPKSEAKAS 294
F++ + + +W NPFS+ E + + NKA+ S + A + S
Sbjct: 701 FFKGSFSGGSWTNPFSTFITDEFGNATKNKAVTSNEVTASSSKNSSIS 748


tr_hit_id A2EB72
Definition tr|A2EB72|A2EB72_TRIVA Ubiquitin carboxyl-terminal hydrolase OS=Trichomonas vaginalis G3
Align length 60
Score (bit) 32.7
E-value 9.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918839|Adiantum capillus-veneris mRNA, clone:
YMU001_000118_B01.
(463 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A2EB72|A2EB72_TRIVA Ubiquitin carboxyl-terminal hydrolase OS=... 33 9.1

>tr|A2EB72|A2EB72_TRIVA Ubiquitin carboxyl-terminal hydrolase
OS=Trichomonas vaginalis G3 GN=TVAG_274820 PE=3 SV=1
Length = 2070

Score = 32.7 bits (73), Expect = 9.1
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = +1

Query: 76 LLSFLKNKTSHKKPSDSFLST*QTSFYRSNVAYSTWINPFSSQPLSEMSSVSLNKAIDSP 255
+LSFL H K SD QT+F SNV + I+ S + L E +S + K P
Sbjct: 1818 ILSFLSKNGIHVKASDFIRQPSQTNFCLSNVFINALISHLSVEGLDEENSYKVFKFFGEP 1877