BP918841 |
Clone id |
YMU001_000118_B04 |
Library |
YMU01 |
Length |
561 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000118_B04. |
Accession |
BP918841 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1295Contig1 |
Sequence |
ATCGATAGTCTAAAGATCCAGCTGGAGGAAAGTAAGATTGAGCGTCAACACAAGGAGGAA TGTGAAGCAATCAGGAGATTGATTGGTGCCCAACCAGCACGGGCAGAGACACAGAAAGTT CTTGATGAACTTACAAGGGAGCTTGCAGCGTTGGAGGCTGAGAATTTGGCCGCTGCCCGG ACTCTAGAACTCCGCAAAAAACAGTTCTCTCTTCTTCTACATGTGGCGGATGATCTTCAA AGTACCATAGAAGATGAAGCGAAGTTTCTGCCAGAGGATTTCAAGAGTGTAGCGGAAGAT ATCAAGGGTGCTGCAATAGAGAGAATCTCTACAGAGCAAGAGAGAGCTATCGTGGAACCG GAGGGTTCAATGGAGCCAATGCAAATAGAGAAAGTGTGATCTAGTCGGCTGAAATTTGTC AAAGAAACCCTTTAAGAGGCACAATGCTAGTGTTTTTGAAAGTGAGCGCAGCATTGATAC ATGAATGAGGGGAAACACTTGTTCTTCGTGTTTGACTTTCGTGGCTCCCTTCCAACCACT TGAAGATGAAATGGTCGAATG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6DGZ3 |
Definition |
sp|Q6DGZ3|THOC7_DANRE THO complex subunit 7 homolog OS=Danio rerio |
Align length |
93 |
Score (bit) |
42.7 |
E-value |
0.001 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PFX8 |
Definition |
tr|A7PFX8|A7PFX8_VITVI Chromosome chr6 scaffold_15, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
102 |
Score (bit) |
99.8 |
E-value |
9.0e-20 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918841|Adiantum capillus-veneris mRNA, clone: YMU001_000118_B04. (561 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PFX8|A7PFX8_VITVI Chromosome chr6 scaffold_15, whole genome... 100 9e-20 tr|Q9M8T6|Q9M8T6_ARATH F13E7.10 protein (At3g02950) (AT3g02950/F... 97 6e-19 tr|Q8LDS5|Q8LDS5_ARATH Putative uncharacterized protein OS=Arabi... 93 1e-17 tr|A0MFG2|A0MFG2_ARATH Putative uncharacterized protein (Fragmen... 93 1e-17 tr|B6TNG8|B6TNG8_MAIZE Ngg1 interacting factor 3 like 1 binding ... 91 4e-17 tr|B6SQF9|B6SQF9_MAIZE Ngg1 interacting factor 3 like 1 binding ... 91 4e-17 tr|B6TWV0|B6TWV0_MAIZE Ngg1 interacting factor 3 like 1 binding ... 90 1e-16 tr|A9PJ71|A9PJ71_POPJC Putative uncharacterized protein OS=Popul... 90 1e-16 tr|Q84UQ0|Q84UQ0_ORYSJ Putative uncharacterized protein P0672D01... 89 1e-16 tr|Q0J7V5|Q0J7V5_ORYSJ Os08g0160000 protein OS=Oryza sativa subs... 89 1e-16 tr|A2YRG2|A2YRG2_ORYSI Putative uncharacterized protein OS=Oryza... 89 1e-16 tr|A9TN93|A9TN93_PHYPA Predicted protein OS=Physcomitrella paten... 85 3e-15 tr|Q9LFD9|Q9LFD9_ARATH Putative uncharacterized protein F5E19_13... 80 8e-14 tr|Q6AUN0|Q6AUN0_ORYSJ Os05g0569800 protein OS=Oryza sativa subs... 80 8e-14 tr|A3B6Z3|A3B6Z3_ORYSJ Putative uncharacterized protein OS=Oryza... 80 8e-14 tr|Q6L4C3|Q6L4C3_SOLDE RIKEN cDNA 1500006O09, related OS=Solanum... 78 3e-13 tr|B8AWT7|B8AWT7_ORYSI Putative uncharacterized protein OS=Oryza... 77 5e-13 tr|A5ADG7|A5ADG7_VITVI Putative uncharacterized protein OS=Vitis... 77 8e-13 tr|B5XFL3|B5XFL3_SALSA THO complex subunit 7 homolog OS=Salmo sa... 41 0.039 tr|B5MDZ2|B5MDZ2_HUMAN Putative uncharacterized protein THOC7 OS... 39 0.19 tr|Q4STW1|Q4STW1_TETNG Chromosome 11 SCAF14097, whole genome sho... 38 0.33 tr|B7Q904|B7Q904_IXOSC THO complex subunit, putative OS=Ixodes s... 36 1.3 tr|B8C7N8|B8C7N8_THAPS Predicted protein OS=Thalassiosira pseudo... 35 2.1 tr|B3RUV9|B3RUV9_TRIAD Putative uncharacterized protein OS=Trich... 35 2.8 tr|A1L2N9|A1L2N9_XENLA LOC100036905 protein OS=Xenopus laevis GN... 35 3.7 tr|A8PI65|A8PI65_COPC7 Predicted protein OS=Coprinopsis cinerea ... 34 6.3 tr|A8PI62|A8PI62_COPC7 Predicted protein (Fragment) OS=Coprinops... 34 6.3 tr|A7SVL5|A7SVL5_NEMVE Predicted protein OS=Nematostella vectens... 33 8.2
>tr|A7PFX8|A7PFX8_VITVI Chromosome chr6 scaffold_15, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00017292001 PE=4 SV=1 Length = 240
Score = 99.8 bits (247), Expect = 9e-20 Identities = 53/102 (51%), Positives = 66/102 (64%) Frame = +1
Query: 1 IDSLKIQLEESKIERQHKEECEAIRRLIGAQPARAETQKVLDXXXXXXXXXXXXXXXXXX 180 I+ LK QLEESKIERQHKEECEAIRRLI QP R+ET+K++ Sbjct: 123 IEDLKKQLEESKIERQHKEECEAIRRLIAMQPPRSETEKIISELENEIAALEAENTAGSR 182
Query: 181 XXXXXKKQFSLLLHVADDLQSTIEDEAKFLPEDFKSVAEDIK 306 KKQF+LLLHV D+LQ+TIE+E K L E+ +S+ E+ K Sbjct: 183 TLELRKKQFALLLHVVDELQNTIEEEQKNLIEEIRSLTEEHK 224
>tr|Q9M8T6|Q9M8T6_ARATH F13E7.10 protein (At3g02950) (AT3g02950/F13E7_10) OS=Arabidopsis thaliana GN=At3g02950 PE=2 SV=1 Length = 236
Score = 97.1 bits (240), Expect = 6e-19 Identities = 50/100 (50%), Positives = 65/100 (65%) Frame = +1
Query: 1 IDSLKIQLEESKIERQHKEECEAIRRLIGAQPARAETQKVLDXXXXXXXXXXXXXXXXXX 180 I+ LK QLEESKI+RQHKEECE IR+LI AQP R+ET+KV+ Sbjct: 126 IEDLKKQLEESKIDRQHKEECETIRKLISAQPPRSETEKVIYELNKEIAELEAESTASWR 185
Query: 181 XXXXXKKQFSLLLHVADDLQSTIEDEAKFLPEDFKSVAED 300 KKQF+LL+HV D+LQ+T+EDE K L ++ +S +ED Sbjct: 186 LLELRKKQFALLMHVVDELQNTMEDEQKSLVDEIRSASED 225
>tr|Q8LDS5|Q8LDS5_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana GN=At5g16790 PE=2 SV=1 Length = 233
Score = 92.8 bits (229), Expect = 1e-17 Identities = 50/95 (52%), Positives = 60/95 (63%) Frame = +1
Query: 1 IDSLKIQLEESKIERQHKEECEAIRRLIGAQPARAETQKVLDXXXXXXXXXXXXXXXXXX 180 I+ LK QLEESKIERQ KEECEAIR+LI AQP R+ETQKV+ Sbjct: 125 IEDLKKQLEESKIERQQKEECEAIRKLISAQPPRSETQKVIHELKKEIAELEAENTASWR 184
Query: 181 XXXXXKKQFSLLLHVADDLQSTIEDEAKFLPEDFK 285 KKQF+LLLHV D+LQ T+EDE K + E+ + Sbjct: 185 LLELRKKQFALLLHVVDELQETMEDEQKSMVEEMQ 219
>tr|A0MFG2|A0MFG2_ARATH Putative uncharacterized protein (Fragment) OS=Arabidopsis thaliana PE=2 SV=1 Length = 234
Score = 92.8 bits (229), Expect = 1e-17 Identities = 50/95 (52%), Positives = 60/95 (63%) Frame = +1
Query: 1 IDSLKIQLEESKIERQHKEECEAIRRLIGAQPARAETQKVLDXXXXXXXXXXXXXXXXXX 180 I+ LK QLEESKIERQ KEECEAIR+LI AQP R+ETQKV+ Sbjct: 125 IEDLKKQLEESKIERQQKEECEAIRKLISAQPPRSETQKVIHELKKEIAELEAENTASWR 184
Query: 181 XXXXXKKQFSLLLHVADDLQSTIEDEAKFLPEDFK 285 KKQF+LLLHV D+LQ T+EDE K + E+ + Sbjct: 185 LLELRKKQFALLLHVVDELQETMEDEQKSMVEEMQ 219
>tr|B6TNG8|B6TNG8_MAIZE Ngg1 interacting factor 3 like 1 binding protein 1 isoform 1 OS=Zea mays PE=2 SV=1 Length = 242
Score = 90.9 bits (224), Expect = 4e-17 Identities = 47/102 (46%), Positives = 65/102 (63%) Frame = +1
Query: 1 IDSLKIQLEESKIERQHKEECEAIRRLIGAQPARAETQKVLDXXXXXXXXXXXXXXXXXX 180 I+ LK QLE+SKIERQHKEECEAIR+LI QP R+ET+K++ Sbjct: 124 IEDLKKQLEQSKIERQHKEECEAIRKLISLQPPRSETEKLIADLEKEITDLKAENVACIR 183
Query: 181 XXXXXKKQFSLLLHVADDLQSTIEDEAKFLPEDFKSVAEDIK 306 KKQF+LLLHV ++LQ +IEDE K + ++ +++A + K Sbjct: 184 TLELRKKQFALLLHVVEELQISIEDEQKSIADELRAIAGEQK 225
>tr|B6SQF9|B6SQF9_MAIZE Ngg1 interacting factor 3 like 1 binding protein 1 isoform 1 OS=Zea mays PE=2 SV=1 Length = 242
Score = 90.9 bits (224), Expect = 4e-17 Identities = 47/102 (46%), Positives = 65/102 (63%) Frame = +1
Query: 1 IDSLKIQLEESKIERQHKEECEAIRRLIGAQPARAETQKVLDXXXXXXXXXXXXXXXXXX 180 I+ LK QLE+SKIERQHKEECEAIR+LI QP R+ET+K++ Sbjct: 124 IEDLKKQLEQSKIERQHKEECEAIRKLISLQPPRSETEKLIADLEKEITDLKAENVACIR 183
Query: 181 XXXXXKKQFSLLLHVADDLQSTIEDEAKFLPEDFKSVAEDIK 306 KKQF+LLLHV ++LQ +IEDE K + ++ +++A + K Sbjct: 184 TLELRKKQFALLLHVVEELQISIEDEQKSIADELRAIAGEQK 225
>tr|B6TWV0|B6TWV0_MAIZE Ngg1 interacting factor 3 like 1 binding protein 1 isoform 1 OS=Zea mays PE=2 SV=1 Length = 242
Score = 89.7 bits (221), Expect = 1e-16 Identities = 47/102 (46%), Positives = 65/102 (63%) Frame = +1
Query: 1 IDSLKIQLEESKIERQHKEECEAIRRLIGAQPARAETQKVLDXXXXXXXXXXXXXXXXXX 180 I+ LK QLE+SKIERQHKEECEAIR+LI QP R+ET+K++ Sbjct: 124 IEDLKKQLEQSKIERQHKEECEAIRKLICLQPPRSETEKLIADLEKEITDLKAENVACIR 183
Query: 181 XXXXXKKQFSLLLHVADDLQSTIEDEAKFLPEDFKSVAEDIK 306 KKQF+LLLHV ++LQ +IEDE K + ++ +++A + K Sbjct: 184 TLELRKKQFALLLHVVEELQISIEDEQKSIADELRAIAGEQK 225
>tr|A9PJ71|A9PJ71_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 240
Score = 89.7 bits (221), Expect = 1e-16 Identities = 50/102 (49%), Positives = 61/102 (59%) Frame = +1
Query: 1 IDSLKIQLEESKIERQHKEECEAIRRLIGAQPARAETQKVLDXXXXXXXXXXXXXXXXXX 180 I+ LK QLEESKIERQHKEECEAIR+LI QP R+ QKV+ Sbjct: 123 IEDLKKQLEESKIERQHKEECEAIRKLIATQPPRSLMQKVITDLEKEIAALEAENTASSR 182
Query: 181 XXXXXKKQFSLLLHVADDLQSTIEDEAKFLPEDFKSVAEDIK 306 KKQF LLLHV D+LQ+TIE++ K L E+ + E+ K Sbjct: 183 LLELRKKQFVLLLHVVDELQNTIEEDEKNLIEEMRVATEEQK 224
>tr|Q84UQ0|Q84UQ0_ORYSJ Putative uncharacterized protein P0672D01.115 (Putative uncharacterized protein) (Putative uncharacterized protein P0498E12.132) OS=Oryza sativa subsp. japonica GN=P0672D01.115 PE=4 SV=1 Length = 228
Score = 89.4 bits (220), Expect = 1e-16 Identities = 47/110 (42%), Positives = 69/110 (62%) Frame = +1
Query: 1 IDSLKIQLEESKIERQHKEECEAIRRLIGAQPARAETQKVLDXXXXXXXXXXXXXXXXXX 180 I+ LK QLE+SKIERQHKEECEAIR++I QP R+ET+K++ Sbjct: 110 IEDLKKQLEQSKIERQHKEECEAIRKMISLQPPRSETEKLIADLEKEIANLEAENTACIR 169
Query: 181 XXXXXKKQFSLLLHVADDLQSTIEDEAKFLPEDFKSVAEDIKGAAIERIS 330 KKQF+LLLHV ++LQ +I+DE + + ++ ++ E+ K +IE +S Sbjct: 170 TLELRKKQFALLLHVVEELQISIDDEQRSIADELRAATEEQK-MSIEEVS 218
>tr|Q0J7V5|Q0J7V5_ORYSJ Os08g0160000 protein OS=Oryza sativa subsp. japonica GN=Os08g0160000 PE=2 SV=1 Length = 242
Score = 89.4 bits (220), Expect = 1e-16 Identities = 47/110 (42%), Positives = 69/110 (62%) Frame = +1
Query: 1 IDSLKIQLEESKIERQHKEECEAIRRLIGAQPARAETQKVLDXXXXXXXXXXXXXXXXXX 180 I+ LK QLE+SKIERQHKEECEAIR++I QP R+ET+K++ Sbjct: 124 IEDLKKQLEQSKIERQHKEECEAIRKMISLQPPRSETEKLIADLEKEIANLEAENTACIR 183
Query: 181 XXXXXKKQFSLLLHVADDLQSTIEDEAKFLPEDFKSVAEDIKGAAIERIS 330 KKQF+LLLHV ++LQ +I+DE + + ++ ++ E+ K +IE +S Sbjct: 184 TLELRKKQFALLLHVVEELQISIDDEQRSIADELRAATEEQK-MSIEEVS 232
|