BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918856|Adiantum capillus-veneris mRNA, clone:
YMU001_000118_C11.
         (377 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q04962|FA12_CAVPO Coagulation factor XII (Fragment) OS=Cavia ...    30   2.8  
sp|Q8CG65|SSPO_MOUSE SCO-spondin OS=Mus musculus GN=Sspo PE=2 SV=1     30   4.8  
sp|Q700K0|SSPO_RAT SCO-spondin OS=Rattus norvegicus GN=Sspo PE=2...    29   6.3  
sp|Q6A8J7|SYH_PROAC Histidyl-tRNA synthetase OS=Propionibacteriu...    29   8.3  
sp|Q08B84|RN19B_XENLA E3 ubiquitin-protein ligase RNF19B OS=Xeno...    29   8.3  
sp|Q92832|NELL1_HUMAN Protein kinase C-binding protein NELL1 OS=...    29   8.3  
sp|A2RM73|MEND_LACLM 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cycloh...    29   8.3  

>sp|Q04962|FA12_CAVPO Coagulation factor XII (Fragment) OS=Cavia
           porcellus GN=F12 PE=1 SV=1
          Length = 603

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 23/73 (31%), Positives = 26/73 (35%), Gaps = 16/73 (21%)
 Frame = +2

Query: 8   SSLRAHCEDFLHQHFCPHLKCQE----------------GPCTSFLLHCKGKTHPDDLLQ 139
           SS    C D L    C   KC E                GP      HCKG   PD   +
Sbjct: 114 SSPHCLCPDHLTGKHCQREKCFEPQLHRFFHENEIWFRTGPAGVAKCHCKG---PDAHCK 170

Query: 140 *LHLWPCQYDPCL 178
            +H   CQ +PCL
Sbjct: 171 QMHSQECQTNPCL 183


>sp|Q8CG65|SSPO_MOUSE SCO-spondin OS=Mus musculus GN=Sspo PE=2 SV=1
          Length = 4998

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +2

Query: 53   CPHLKCQEGPCTSFLLHCKGKTHPD 127
            CP   C +G C  FLL C G  +PD
Sbjct: 1534 CPEFSCPDGTCIDFLLVCDG--NPD 1556


>sp|Q700K0|SSPO_RAT SCO-spondin OS=Rattus norvegicus GN=Sspo PE=2 SV=1
          Length = 5141

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 21/63 (33%), Positives = 22/63 (34%), Gaps = 3/63 (4%)
 Frame = +2

Query: 53   CPHLKCQEGPCTSFLLHCKGKTHPDDLLQ*LHLWPCQYDPCLRPQLY*Q---TISSWEPS 223
            CP   C  G C  FLL C G   PD          C+      P L  Q   T  SW P 
Sbjct: 1661 CPEFSCPNGTCIDFLLVCDGS--PD----------CELADETEPSLDEQGCGTWGSWGPW 1708

Query: 224  PAC 232
              C
Sbjct: 1709 EPC 1711


>sp|Q6A8J7|SYH_PROAC Histidyl-tRNA synthetase OS=Propionibacterium
           acnes GN=hisS PE=3 SV=1
          Length = 454

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = -1

Query: 206 KSFVNTVVASSTGRIDMATSEAIAASHLDGFFPCSVEERTCKVPLDISNADR 51
           +S  + V+ +     D ATSE IA++      PC V  +  K    I +ADR
Sbjct: 350 RSVPSAVLVAVNTEEDRATSEVIASALRSRGIPCEVAPKADKFGKQIKHADR 401


>sp|Q08B84|RN19B_XENLA E3 ubiquitin-protein ligase RNF19B OS=Xenopus
           laevis GN=rnf19b PE=2 SV=2
          Length = 687

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
 Frame = +2

Query: 53  CPHLKCQEGPC-TSFLLHCKGKTHPD 127
           CP L C+   C T F  HCK   HP+
Sbjct: 199 CPKLTCEREGCRTEFCYHCKHVWHPN 224


>sp|Q92832|NELL1_HUMAN Protein kinase C-binding protein NELL1
           OS=Homo sapiens GN=NELL1 PE=2 SV=3
          Length = 810

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
 Frame = -3

Query: 198 C*YSCGLKHGSY*HGHK*SYCSKSSGWVFPLQCRRK--DVQGPS*HFKCGQKC*WRKSSQ 25
           C +  GLKH       K   CS  S     + CRR   D Q PS    C  +C  R +SQ
Sbjct: 634 CPHEGGLKHNGQVWTLKEDRCSVCSCKDGKIFCRRTACDCQNPSADLFCCPECDTRVTSQ 693

Query: 24  C 22
           C
Sbjct: 694 C 694


>sp|A2RM73|MEND_LACLM
           2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-
           carboxylate synthase OS=Lactococcus lactis subsp.
           cremoris (strain MG1363) GN=menD PE=3 SV=1
          Length = 554

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = -1

Query: 158 MATSEAIAASHLDGFFPCSVEERTCKVPLDISNADRNAD 42
           + TS + AA H    FP   E +T ++PL I  ADR A+
Sbjct: 71  VCTSGSAAAHH----FPAITEAKTSRIPLIILTADRPAE 105

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918856|Adiantum capillus-veneris mRNA, clone:
YMU001_000118_C11.
         (377 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A0EIZ7|A0EIZ7_APIME Nicotinic acetylcholine receptor alpha9 s...    34   3.1  

>tr|A0EIZ7|A0EIZ7_APIME Nicotinic acetylcholine receptor alpha9
           subunit OS=Apis mellifera PE=2 SV=1
          Length = 431

 Score = 34.3 bits (77), Expect = 3.1
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +2

Query: 89  SFLLHCKGKTHPDDLLQ*LHLWPCQYDPCLRP 184
           S+LL+CK   HP  LL+      C+YDP +RP
Sbjct: 30  SYLLNCKNYDHPTTLLKLKRYLFCEYDPNVRP 61