BP918857
Clone id YMU001_000118_C12
Library
Length 268
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000118_C12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GAGTAGAGTTACAGCTCTTGGTTACTTTTGACATTCACTTATAGTAGTCAATATGTGTGA
GACTTTCGAGTCTAGGACAATGACTCATGAGAGACAGCGTTCTCGTTCGTGTCGACACTT
GAGATGTTGGCATTGTGGTCACACAGGGCACATTAGACGGCGATGCTTTCGTCGTATGAG
ACAACACAGGAGACATGCTAGTCTCAAGGATGCAGTAGATTCTATAGGCTCCGTTGACTT
GACAATTGCAGGATCAGATACAGTGTCT
■■Homology search results ■■ -
sp_hit_id Q8WXI7
Definition sp|Q8WXI7|MUC16_HUMAN Mucin-16 OS=Homo sapiens
Align length 56
Score (bit) 34.7
E-value 0.15
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918857|Adiantum capillus-veneris mRNA, clone:
YMU001_000118_C12.
(254 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8WXI7|MUC16_HUMAN Mucin-16 OS=Homo sapiens GN=MUC16 PE=1 SV=2 35 0.15
sp|Q2KHR2|RFX7_HUMAN DNA-binding protein RFX7 OS=Homo sapiens GN... 34 0.26
sp|P36756|VL2_HPV30 Minor capsid protein L2 OS=Human papillomavi... 30 2.8
sp|O46598|TIMD1_CERAE Hepatitis A virus cellular receptor 1 OS=C... 30 4.8
sp|Q4UKT5|Y987_RICFE Putative ankyrin repeat protein RF_0987 OS=... 29 8.3

>sp|Q8WXI7|MUC16_HUMAN Mucin-16 OS=Homo sapiens GN=MUC16 PE=1 SV=2
Length = 22152

Score = 34.7 bits (78), Expect = 0.15
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Frame = -2

Query: 202 TSMSPVLSHTTKASPSNVPCVTTMPTSQVSTRTRTL------SLMSHCPRLESLTH 53
TS SPV S + ++ PS+ VT +PTS + T T L S+ S P L S+TH
Sbjct: 5347 TSPSPVSSTSPQSIPSSPLPVTALPTSVLVTTTDVLGTTSPESVTSSPPNLSSITH 5402


>sp|Q2KHR2|RFX7_HUMAN DNA-binding protein RFX7 OS=Homo sapiens GN=RFX7
PE=1 SV=1
Length = 1363

Score = 33.9 bits (76), Expect = 0.26
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = -2

Query: 217 YCILETSMSPVLSHTTKASPSNVPCVTTMPTSQVSTRTRTLSLMSHCPRLESLTHID 47
Y + ++ +P+ + T +P+ P T PTS++ +++LS S C RL T +D
Sbjct: 838 YHPIHSNGTPIHTPTPTPTPTPTPTPTPTPTSEMIAGSQSLSRESPCSRLAQTTPVD 894


>sp|P36756|VL2_HPV30 Minor capsid protein L2 OS=Human papillomavirus
type 30 GN=L2 PE=3 SV=1
Length = 463

Score = 30.4 bits (67), Expect = 2.8
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = -2

Query: 253 SCNCQVNGAYRIYCILETSMSPVLSHTTKASPSNVPCVTTMPTSQVSTRT 104
S N +G Y IY L+ +PV SH + A+PS +P T+P S S T
Sbjct: 339 SANNSFDGLYDIYANLDDE-APVSSHLSIATPSRLP-TNTVPLSFSSQTT 386


>sp|O46598|TIMD1_CERAE Hepatitis A virus cellular receptor 1
OS=Cercopithecus aethiops GN=HAVCR1 PE=1 SV=2
Length = 478

Score = 29.6 bits (65), Expect = 4.8
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -2

Query: 202 TSMSPVLSHTTKASPSNVPCVTTMPTSQVSTRTRTLSLMSHCPRLESL 59
T+ P TT P+ +P TT+PT+ T TL + P +L
Sbjct: 205 TTTLPTTLPTTTTLPTTLPTTTTLPTTMTLPMTTTLPTTTTLPTTTTL 252


>sp|Q4UKT5|Y987_RICFE Putative ankyrin repeat protein RF_0987
OS=Rickettsia felis GN=RF_0987 PE=4 SV=1
Length = 566

Score = 28.9 bits (63), Expect = 8.3
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = -2

Query: 211 ILETSMSPVLSHTT--KASPSNVPCVTTMPTSQVSTRTRT 98
+++ + +P TT A PSNVP MPT+Q ST+ T
Sbjct: 251 VIQDTTTPSTMPTTVPPAVPSNVPAPPVMPTNQPSTQPIT 290


tr_hit_id A3KN94
Definition tr|A3KN94|A3KN94_XENTR Rfx7 protein OS=Xenopus tropicalis
Align length 62
Score (bit) 39.7
E-value 0.076
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918857|Adiantum capillus-veneris mRNA, clone:
YMU001_000118_C12.
(254 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A3KN94|A3KN94_XENTR Rfx7 protein OS=Xenopus tropicalis GN=rfx... 40 0.076
tr|A7Q4Q2|A7Q4Q2_VITVI Chromosome chr10 scaffold_50, whole genom... 37 0.65
tr|Q54KN8|Q54KN8_DICDI Putative uncharacterized protein OS=Dicty... 36 1.1
tr|B8BZW8|B8BZW8_THAPS Predicted protein OS=Thalassiosira pseudo... 35 1.9
tr|B5ME49|B5ME49_HUMAN Putative uncharacterized protein MUC16 OS... 35 2.5
tr|A8MQ24|A8MQ24_HUMAN Putative uncharacterized protein MUC16 (F... 35 2.5
tr|A5CAX7|A5CAX7_VITVI Putative uncharacterized protein OS=Vitis... 34 4.2
tr|Q4R8U9|Q4R8U9_MACFA Testis cDNA clone: QtsA-11424, similar to... 34 4.2
tr|B7ZKX1|B7ZKX1_HUMAN Putative uncharacterized protein (Fragmen... 34 4.2
tr|A7PY35|A7PY35_VITVI Chromosome chr15 scaffold_37, whole genom... 33 5.5
tr|A5BJT3|A5BJT3_VITVI Putative uncharacterized protein OS=Vitis... 33 5.5
tr|A0ZYQ1|A0ZYQ1_9CAUD Putative uncharacterized protein OS=Archa... 33 7.2
tr|A7R7H0|A7R7H0_VITVI Chromosome undetermined scaffold_1774, wh... 33 7.2
tr|A7R7G1|A7R7G1_VITVI Chromosome undetermined scaffold_1754, wh... 33 7.2
tr|A7R721|A7R721_VITVI Chromosome undetermined scaffold_1531, wh... 33 7.2
tr|A7QMP4|A7QMP4_VITVI Chromosome undetermined scaffold_127, who... 33 7.2
tr|A7QAU0|A7QAU0_VITVI Chromosome chr5 scaffold_72, whole genome... 33 7.2
tr|A7QAT1|A7QAT1_VITVI Chromosome chr5 scaffold_72, whole genome... 33 7.2
tr|A7PQ76|A7PQ76_VITVI Chromosome chr18 scaffold_24, whole genom... 33 7.2
tr|A7PPN0|A7PPN0_VITVI Chromosome chr8 scaffold_23, whole genome... 33 7.2
tr|A7P6C8|A7P6C8_VITVI Chromosome chr9 scaffold_7, whole genome ... 33 7.2
tr|A7P0C8|A7P0C8_VITVI Chromosome chr6 scaffold_3, whole genome ... 33 7.2
tr|A7NW85|A7NW85_VITVI Chromosome chr5 scaffold_2, whole genome ... 33 7.2
tr|A7NVM5|A7NVM5_VITVI Chromosome chr18 scaffold_1, whole genome... 33 7.2
tr|A7NUU2|A7NUU2_VITVI Chromosome chr18 scaffold_1, whole genome... 33 7.2
tr|A5CBM1|A5CBM1_VITVI Putative uncharacterized protein OS=Vitis... 33 7.2
tr|A5CB53|A5CB53_VITVI Putative uncharacterized protein OS=Vitis... 33 7.2
tr|A5C9A6|A5C9A6_VITVI Putative uncharacterized protein OS=Vitis... 33 7.2
tr|A5C844|A5C844_VITVI Putative uncharacterized protein OS=Vitis... 33 7.2
tr|A5C6L3|A5C6L3_VITVI Putative uncharacterized protein OS=Vitis... 33 7.2

>tr|A3KN94|A3KN94_XENTR Rfx7 protein OS=Xenopus tropicalis GN=rfx7
PE=2 SV=1
Length = 1439

Score = 39.7 bits (91), Expect = 0.076
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = -2

Query: 232 GAYRIYCILETSMSPVLSHTTKASPSNVPCVTTMPTSQVSTRTRTLSLMSHCPRLESLTH 53
G+ Y + +S +PV HT +P+ P +T PTS++ + T +LS S C RL T
Sbjct: 914 GSAHFYHSVHSSGTPV--HTPTPTPTPTPTLTPTPTSEMISGTHSLSRESPCSRLAQTTP 971

Query: 52 ID 47
+D
Sbjct: 972 VD 973


>tr|A7Q4Q2|A7Q4Q2_VITVI Chromosome chr10 scaffold_50, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00029789001
PE=4 SV=1
Length = 354

Score = 36.6 bits (83), Expect = 0.65
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2

Query: 71 SRTMTHERQRSRSCRHLRCWHCGHTG 148
SR + +SRSC+ ++CW+CG TG
Sbjct: 161 SRNSNRNKSKSRSCQQVQCWNCGKTG 186


>tr|Q54KN8|Q54KN8_DICDI Putative uncharacterized protein
OS=Dictyostelium discoideum GN=DDB_0187373 PE=4 SV=1
Length = 701

Score = 35.8 bits (81), Expect = 1.1
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = -2

Query: 253 SCNCQVNGAYRIYCILETSMSPVLSHTTKASPSNVPCVTTMPTSQVSTRTRTLSLMSHCP 74
S + + G+Y T+ + S T+ S S+ ++T TS ST T TLS+ S P
Sbjct: 345 SVSSLLTGSYGNSSATNTTTASTSSSTSSPSSSSSTSISTSSTSSTSTSTSTLSISSSNP 404

Query: 73 RLES 62
+L+S
Sbjct: 405 QLQS 408


>tr|B8BZW8|B8BZW8_THAPS Predicted protein OS=Thalassiosira
pseudonana CCMP1335 GN=THAPSDRAFT_4653 PE=4 SV=1
Length = 760

Score = 35.0 bits (79), Expect = 1.9
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = -2

Query: 199 SMSPVLSHTTKASPSNVPCVTTMPTSQVS 113
SMSP +SH ASPS P ++T PTS S
Sbjct: 77 SMSPSVSHMPSASPSESPTISTQPTSSPS 105


>tr|B5ME49|B5ME49_HUMAN Putative uncharacterized protein MUC16 OS=Homo
sapiens GN=MUC16 PE=4 SV=1
Length = 8998

Score = 34.7 bits (78), Expect = 2.5
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Frame = -2

Query: 202 TSMSPVLSHTTKASPSNVPCVTTMPTSQVSTRTRTL------SLMSHCPRLESLTH 53
TS SPV S + ++ PS+ VT +PTS + T T L S+ S P L S+TH
Sbjct: 5345 TSPSPVSSTSPQSIPSSPLPVTALPTSVLVTTTDVLGTTSPESVTSSPPNLSSITH 5400


>tr|A8MQ24|A8MQ24_HUMAN Putative uncharacterized protein MUC16
(Fragment) OS=Homo sapiens GN=MUC16 PE=4 SV=1
Length = 7699

Score = 34.7 bits (78), Expect = 2.5
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Frame = -2

Query: 202 TSMSPVLSHTTKASPSNVPCVTTMPTSQVSTRTRTL------SLMSHCPRLESLTH 53
TS SPV S + ++ PS+ VT +PTS + T T L S+ S P L S+TH
Sbjct: 978 TSPSPVSSTSPQSIPSSPLPVTALPTSVLVTTTDVLGTTSPESVTSSPPNLSSITH 1033


>tr|A5CAX7|A5CAX7_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_035336 PE=4 SV=1
Length = 1244

Score = 33.9 bits (76), Expect = 4.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2

Query: 71 SRTMTHERQRSRSCRHLRCWHCGHTG 148
SR R +SRS + ++CW+CG TG
Sbjct: 221 SRNSNRNRSKSRSXQQVQCWNCGKTG 246


>tr|Q4R8U9|Q4R8U9_MACFA Testis cDNA clone: QtsA-11424, similar to
human hypothetical protein FLJ12994 (FLJ12994),
OS=Macaca fascicularis PE=2 SV=1
Length = 573

Score = 33.9 bits (76), Expect = 4.2
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = -2

Query: 217 YCILETSMSPVLSHTTKASPSNVPCVTTMPTSQVSTRTRTLSLMSHCPRLESLTHID 47
Y + ++ +P+ + T +P+ P T PTS++ +++LS S C RL T +D
Sbjct: 131 YHPIHSNGTPIHTPTPTPTPTPTPTPTPTPTSEMIAGSQSLSRESPCSRLAQTTPVD 187


>tr|B7ZKX1|B7ZKX1_HUMAN Putative uncharacterized protein (Fragment)
OS=Homo sapiens PE=2 SV=1
Length = 1292

Score = 33.9 bits (76), Expect = 4.2
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = -2

Query: 217 YCILETSMSPVLSHTTKASPSNVPCVTTMPTSQVSTRTRTLSLMSHCPRLESLTHID 47
Y + ++ +P+ + T +P+ P T PTS++ +++LS S C RL T +D
Sbjct: 854 YHPIHSNGTPIHTPTPTPTPTPTPTPTPTPTSEMIAGSQSLSRESPCSRLAQTTPVD 910


>tr|A7PY35|A7PY35_VITVI Chromosome chr15 scaffold_37, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00026283001
PE=4 SV=1
Length = 389

Score = 33.5 bits (75), Expect = 5.5
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2

Query: 50 NMCETFESRTMTHERQRSRSCRHLRCWHCGHT 145
N C + +SR R +SRS + ++CW+CG T
Sbjct: 213 NQCRS-KSRNSNRNRSKSRSSQQVQCWNCGKT 243