BP918867
Clone id YMU001_000118_D11
Library
Length 234
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000118_D11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GAATCAGCCAACCTTCGATGGGACAAGGTCCAAACTAATTCTGCAAAACAGAGATACACT
TTTGGAGCTGTGAATTCCTCATCCATCACACCCTTTCACAAAATGCTCCTTTCTTCCTTA
AAGTGTCTCCTCATTGCCAGAGCCATCGTAAACTCCCCAAGGCACATGCATACGAGAAAA
CTTCCACCATTTTTGCCTGTCCATGTATTCAAGCCAGAAACGTTACCCTTGGCA
■■Homology search results ■■ -
sp_hit_id A2ARA8
Definition sp|A2ARA8|ITA8_MOUSE Integrin alpha-8 OS=Mus musculus
Align length 66
Score (bit) 31.6
E-value 1.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918867|Adiantum capillus-veneris mRNA, clone:
YMU001_000118_D11.
(234 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A2ARA8|ITA8_MOUSE Integrin alpha-8 OS=Mus musculus GN=Itga8 P... 32 1.3

>sp|A2ARA8|ITA8_MOUSE Integrin alpha-8 OS=Mus musculus GN=Itga8 PE=1
SV=1
Length = 1062

Score = 31.6 bits (70), Expect = 1.3
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Frame = +3

Query: 18 MGQGPN*FCKTEIHFWSCEFLI----HHTLSQNAPFFLKVSPHCQSHRKLPKAHAYEKTS 185
+G G + K W+ FL H+ L+ F +K P+ + KLP KTS
Sbjct: 938 LGGGESAVLKVRSRLWAHTFLKRKNDHYALASLVSFEVKKMPYKEQPAKLPAGSTAVKTS 997

Query: 186 TIFACP 203
I+A P
Sbjct: 998 VIWATP 1003


tr_hit_id A0Z2H8
Definition tr|A0Z2H8|A0Z2H8_9GAMM Putative molybdenum ABC transporter, ATP-binding protein ModF OS=marine gamma proteobacterium HTCC2080
Align length 45
Score (bit) 33.1
E-value 7.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918867|Adiantum capillus-veneris mRNA, clone:
YMU001_000118_D11.
(234 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A0Z2H8|A0Z2H8_9GAMM Putative molybdenum ABC transporter, ATP-... 33 7.0

>tr|A0Z2H8|A0Z2H8_9GAMM Putative molybdenum ABC transporter,
ATP-binding protein ModF OS=marine gamma proteobacterium
HTCC2080 GN=MGP2080_02715 PE=3 SV=1
Length = 470

Score = 33.1 bits (74), Expect = 7.0
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +1

Query: 25 KVQTNSAKQRYTFGAVNSSSITPFHKMLLSSLKCLLIARAIVNSP 159
+VQ AKQ + + PFH M + +LIARA+V SP
Sbjct: 360 EVQVKIAKQWLQAAGLREHATEPFHTMSYGEQRLVLIARALVKSP 404