BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918883|Adiantum capillus-veneris mRNA, clone:
YMU001_000118_F04.
         (381 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8EDD7|Y2823_SHEON Uncharacterized response regulatory protei...    29   8.2  
sp|Q9FQ03|XRN3_ARATH 5'-3' exoribonuclease 3 OS=Arabidopsis thal...    29   8.2  

>sp|Q8EDD7|Y2823_SHEON Uncharacterized response regulatory protein
           SO_2823 OS=Shewanella oneidensis GN=SO_2823 PE=3 SV=1
          Length = 236

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 303 YIYSNLRHVHPICLSGGYRENLCIVCILQSVRIVHCKGQ 187
           Y++S+L  +H  C  G     L +  + +   +VHC  Q
Sbjct: 153 YVFSDLSGIHVACTKGKVHTQLTLKVLEEKTPLVHCHRQ 191


>sp|Q9FQ03|XRN3_ARATH 5'-3' exoribonuclease 3 OS=Arabidopsis
           thaliana GN=XRN3 PE=2 SV=1
          Length = 1020

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +2

Query: 47  CKXXXXXEAHVHATKKYSGLYFSSKITQIGDLETSP 154
           C      +AH H T+   G+ F  K   IGDL+  P
Sbjct: 782 CCIYRLPDAHEHITRPPPGVIFPKKTVDIGDLKPPP 817

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918883|Adiantum capillus-veneris mRNA, clone:
YMU001_000118_F04.
         (381 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q55CG1|Q55CG1_DICDI Putative uncharacterized protein OS=Dicty...    33   7.0  

>tr|Q55CG1|Q55CG1_DICDI Putative uncharacterized protein
           OS=Dictyostelium discoideum GN=DDB_0201942 PE=4 SV=1
          Length = 217

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -2

Query: 359 RALILNGRECHDCDYVNSITSTPTSAMYTQSVSRVAIG 246
           R L +NG++C  CD++ S+    TS M++ S   +  G
Sbjct: 49  RKLSVNGKDCTRCDWIQSLNKCTTSGMFSLSSVDIPFG 86