BP918894 |
Clone id |
YMU001_000118_G03 |
Library |
YMU01 |
Length |
508 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000118_G03. |
Accession |
BP918894 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CGTGCGCACGCAAGTTCAGAAGCGGTTCTTGCTCGACCCGAGTATCACACCTGCTCTTCT GCGAATGCTCTTCCATGACTCCTTTGTCAGAGTATGCATCCTCTTCCTTTTCCTCTTGTT TAATGTTTCTGTTATAAATCAAAGGCTTCATGATTACTTTCATTACATTTTCTGGAGAGA TAATTGTCTTCCTTTTGCGCTAAGGCTTCTTGAACCTGCATTTAGGTTCTTATTTGTATC TTGTCTGAGCCATCTACTCTTTTTTATGGTGATTTGCTTTGTCTAAAGCTCCCCTGCTCA AGATGTGTTCTTAAGCATGGAGTACCCAAGTGTCTGATGCTCATATCATTGAATACGGTA CACACGGCGGCATCGAGGTAGTAACAGCTGGTTGAGTTCTGCTGCCCCCTGCGTGCCTAT TGTTGAGTGGACTCAAAAGGAATTGTACTTGGCCAGGTCCTTGAGCTTTTGAGTGCCAAT GGCTGGCCAGATGCAAGTAGACTTTCCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q43729 |
Definition |
sp|Q43729|PER57_ARATH Peroxidase 57 OS=Arabidopsis thaliana |
Align length |
32 |
Score (bit) |
39.7 |
E-value |
0.008 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S3T7 |
Definition |
tr|A9S3T7|A9S3T7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
53 |
Score (bit) |
45.1 |
E-value |
0.002 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918894|Adiantum capillus-veneris mRNA, clone: YMU001_000118_G03. (508 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S3T7|A9S3T7_PHYPA Predicted protein OS=Physcomitrella paten... 45 0.002 tr|A2Q4B7|A2Q4B7_MEDTR Haem peroxidase, plant/fungal/bacterial O... 43 0.010 tr|A9NLP5|A9NLP5_PICSI Putative uncharacterized protein OS=Picea... 42 0.013 tr|A9SS95|A9SS95_PHYPA Predicted protein OS=Physcomitrella paten... 42 0.017 tr|A9S4N6|A9S4N6_PHYPA Predicted protein OS=Physcomitrella paten... 42 0.017 tr|Q8RVP4|Q8RVP4_GOSHI Bacterial-induced class III peroxidase OS... 40 0.050 tr|Q5U1P1|Q5U1P1_ORYSJ Class III peroxidase 52 OS=Oryza sativa s... 40 0.050 tr|P93551|P93551_SPIOL Peroxidase (Fragment) OS=Spinacia olerace... 40 0.065 tr|Q8RVW0|Q8RVW0_GOSHI Bacterial-induced peroxidase OS=Gossypium... 40 0.085 tr|Q53YQ5|Q53YQ5_ARATH Peroxidase ATP13A OS=Arabidopsis thaliana... 40 0.085 tr|A9T3U8|A9T3U8_PHYPA Predicted protein OS=Physcomitrella paten... 40 0.085 tr|A3AQ51|A3AQ51_ORYSJ Putative uncharacterized protein OS=Oryza... 40 0.085 tr|Q4ADU9|Q4ADU9_POPAL Peroxidase OS=Populus alba PE=2 SV=1 39 0.11 tr|A9RXZ4|A9RXZ4_PHYPA Predicted protein OS=Physcomitrella paten... 39 0.11 tr|A2WN24|A2WN24_ORYSI Putative uncharacterized protein OS=Oryza... 39 0.11 tr|Q9M4Z5|Q9M4Z5_SPIOL Peroxidase prx12 OS=Spinacia oleracea PE=... 39 0.15 tr|A7Q6Y9|A7Q6Y9_VITVI Chromosome chr12 scaffold_57, whole genom... 39 0.15 tr|A7Q6Y7|A7Q6Y7_VITVI Chromosome chr12 scaffold_57, whole genom... 39 0.15 tr|A5BNZ1|A5BNZ1_VITVI Putative uncharacterized protein OS=Vitis... 39 0.15 tr|A5B8V0|A5B8V0_VITVI Putative uncharacterized protein OS=Vitis... 39 0.15 tr|A2Q4B6|A2Q4B6_MEDTR Haem peroxidase, plant/fungal/bacterial O... 39 0.15 tr|A9U150|A9U150_PHYPA Predicted protein OS=Physcomitrella paten... 39 0.19 tr|A7P7B4|A7P7B4_VITVI Chromosome chr9 scaffold_7, whole genome ... 39 0.19 tr|Q680D7|Q680D7_ARATH Putative peroxidase OS=Arabidopsis thalia... 38 0.25 tr|Q4A3Y6|Q4A3Y6_SOLLC Peroxidase cevi16 (Fragment) OS=Solanum l... 38 0.25 tr|Q4A3Y5|Q4A3Y5_CAPAN Peroxidase POA1 (Fragment) OS=Capsicum an... 38 0.25 tr|Q43499|Q43499_SOLLC Peroxidase OS=Solanum lycopersicum GN=cev... 38 0.25 tr|Q2WEC9|Q2WEC9_SOLLC Cationic peroxidase OS=Solanum lycopersic... 38 0.25 tr|Q7XLT4|Q7XLT4_ORYSJ Os04g0134800 protein OS=Oryza sativa subs... 38 0.32 tr|B8AUN4|B8AUN4_ORYSI Putative uncharacterized protein OS=Oryza... 38 0.32
>tr|A9S3T7|A9S3T7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_180928 PE=4 SV=1 Length = 317
Score = 45.1 bits (105), Expect = 0.002 Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 4/53 (7%) Frame = +2
Query: 11 QVQKRFLLDPSITPALLRMLFHDSFVRVCILFLFL----LFNVSVINQRLHDY 157 +VQ+ F DP++ P LLR++FHD FVR C + L S IN RLH + Sbjct: 48 EVQRYFKKDPTVAPGLLRLIFHDCFVRGCDASVLLSGRRSERASAINARLHGF 100
>tr|A2Q4B7|A2Q4B7_MEDTR Haem peroxidase, plant/fungal/bacterial OS=Medicago truncatula GN=MtrDRAFT_AC157472g9v2 PE=4 SV=1 Length = 315
Score = 42.7 bits (99), Expect = 0.010 Identities = 22/32 (68%), Positives = 23/32 (71%) Frame = +2
Query: 2 VRTQVQKRFLLDPSITPALLRMLFHDSFVRVC 97 V+ VQKRF D SIT ALLRM FHD FVR C Sbjct: 36 VKQVVQKRFNRDKSITAALLRMHFHDCFVRGC 67
>tr|A9NLP5|A9NLP5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 169
Score = 42.4 bits (98), Expect = 0.013 Identities = 19/32 (59%), Positives = 24/32 (75%) Frame = +2
Query: 2 VRTQVQKRFLLDPSITPALLRMLFHDSFVRVC 97 V+ +VQ++F D +I PALLRM FHD FVR C Sbjct: 48 VQVRVQRKFRTDKTIVPALLRMHFHDCFVRGC 79
>tr|A9SS95|A9SS95_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_134516 PE=4 SV=1 Length = 307
Score = 42.0 bits (97), Expect = 0.017 Identities = 20/32 (62%), Positives = 22/32 (68%) Frame = +2
Query: 2 VRTQVQKRFLLDPSITPALLRMLFHDSFVRVC 97 VR V+ RF D SITPALLR+ FHD FV C Sbjct: 26 VRQVVENRFSRDQSITPALLRLFFHDCFVTGC 57
>tr|A9S4N6|A9S4N6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_74504 PE=4 SV=1 Length = 317
Score = 42.0 bits (97), Expect = 0.017 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%) Frame = +2
Query: 2 VRTQVQKRFLLDPSITPALLRMLFHDSFVRVCILFLFL----LFNVSVINQRLHDY 157 + +V K+F DP+I P +LR++FHD FVR C + L S+ N LH + Sbjct: 45 IHKEVLKQFKKDPTIAPGILRLIFHDCFVRGCDASVLLAGKDTERTSLTNANLHGF 100
>tr|Q8RVP4|Q8RVP4_GOSHI Bacterial-induced class III peroxidase OS=Gossypium hirsutum GN=pod6 PE=2 SV=1 Length = 328
Score = 40.4 bits (93), Expect = 0.050 Identities = 19/32 (59%), Positives = 21/32 (65%) Frame = +2
Query: 2 VRTQVQKRFLLDPSITPALLRMLFHDSFVRVC 97 VR+ VQ F DP+I P LLRM FHD FV C Sbjct: 45 VRSTVQSHFGSDPTIAPGLLRMHFHDCFVHGC 76
>tr|Q5U1P1|Q5U1P1_ORYSJ Class III peroxidase 52 OS=Oryza sativa subsp. japonica GN=prx52 PE=3 SV=1 Length = 331
Score = 40.4 bits (93), Expect = 0.050 Identities = 18/39 (46%), Positives = 27/39 (69%) Frame = +2
Query: 2 VRTQVQKRFLLDPSITPALLRMLFHDSFVRVCILFLFLL 118 VR +++RF D +I PA++RMLFHD FV+ C L ++ Sbjct: 49 VRQVMERRFYNDNTIAPAIIRMLFHDCFVQGCDASLLIV 87
>tr|P93551|P93551_SPIOL Peroxidase (Fragment) OS=Spinacia oleracea GN=prxr7 PE=2 SV=1 Length = 308
Score = 40.0 bits (92), Expect = 0.065 Identities = 18/32 (56%), Positives = 22/32 (68%) Frame = +2
Query: 2 VRTQVQKRFLLDPSITPALLRMLFHDSFVRVC 97 VR+ VQ F DP+I P LLR+ FHD FV+ C Sbjct: 25 VRSTVQSHFNSDPTIAPGLLRLHFHDCFVQGC 56
>tr|Q8RVW0|Q8RVW0_GOSHI Bacterial-induced peroxidase OS=Gossypium hirsutum GN=pod2 PE=2 SV=1 Length = 327
Score = 39.7 bits (91), Expect = 0.085 Identities = 18/32 (56%), Positives = 22/32 (68%) Frame = +2
Query: 2 VRTQVQKRFLLDPSITPALLRMLFHDSFVRVC 97 VR+ VQ F +P+I P LLRM FHD FV+ C Sbjct: 46 VRSTVQSHFRSNPNIAPGLLRMHFHDCFVQGC 77
>tr|Q53YQ5|Q53YQ5_ARATH Peroxidase ATP13A OS=Arabidopsis thaliana PE=4 SV=1 Length = 313
Score = 39.7 bits (91), Expect = 0.085 Identities = 18/32 (56%), Positives = 24/32 (75%) Frame = +2
Query: 2 VRTQVQKRFLLDPSITPALLRMLFHDSFVRVC 97 VR V++RF + P++T ALLRM FHD FV+ C Sbjct: 40 VRNLVRQRFGVTPTVTAALLRMHFHDCFVKGC 71
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