BP918913
Clone id YMU001_000118_H11
Library
Length 461
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000118_H11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TATTTTTTCTCTTCATGGTGACAACATTTTCTTGTTTACATATTGCTTCTTAGATTATGG
CTCTTGCAAATGTGAATTTTGAGCATCCACCATTTCTTGGACTTCAGAAGTTCTATCCAC
TTTATCTGCATCCACTTGTTCACTTGGAGGGCTCTATGTGCATCCCAACTATTCATGGGT
CCTTTCTCTTCCAATGTTGTGTCCTTATCCATAATTATAGCTCCAATATCTTGGGCTACC
TTTGCCGCTTCTTCTTCTCTTGGTTCTATAGATGGCTCCTTTATCATTGAAACATGGGCT
TGTTCCACTTTGTCTTGAAAGAACGTTGCTGCTTTTTTGTTTGGCTTGTTGGAGCTACCC
TTGGAGAGTATGTTGAGTTGCTAAAGAGCTCATTAGCAAATTATTTTGGCCTTTTTATCT
TAGCAGTCTCCTCTCTTTCCTCATCTTTTCTCTTCAATCCA
■■Homology search results ■■ -
sp_hit_id P32568
Definition sp|P32568|SNQ2_YEAST Protein SNQ2 OS=Saccharomyces cerevisiae
Align length 87
Score (bit) 34.3
E-value 0.27
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918913|Adiantum capillus-veneris mRNA, clone:
YMU001_000118_H11.
(461 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P32568|SNQ2_YEAST Protein SNQ2 OS=Saccharomyces cerevisiae GN... 34 0.27
sp|P53756|YN99_YEAST Uncharacterized ABC transporter ATP-binding... 34 0.35
sp|P19199|POL_COYMV Putative polyprotein OS=Commelina yellow mot... 32 1.0
sp|Q83IQ8|MDTO_SHIFL Multidrug resistance protein mdtO OS=Shigel... 32 1.7
sp|P32715|MDTO_ECOLI Multidrug resistance protein mdtO OS=Escher... 32 1.7
sp|Q8FAX2|MDTO_ECOL6 Multidrug resistance protein mdtO OS=Escher... 32 1.7
sp|Q8X5R8|MDTO_ECO57 Multidrug resistance protein mdtO OS=Escher... 32 1.7
sp|Q9TKS6|MATK_SOYBN Maturase K OS=Glycine max GN=matK PE=3 SV=2 31 2.2
sp|P45931|YQBO_BACSU Uncharacterized protein yqbO OS=Bacillus su... 31 2.9
sp|Q4FLS9|RNC_PELUB Ribonuclease 3 OS=Pelagibacter ubique GN=rnc... 31 2.9
sp|Q00416|SEN1_YEAST Helicase SEN1 OS=Saccharomyces cerevisiae G... 30 5.0
sp|Q6PP78|MATK_VIGUN Maturase K OS=Vigna unguiculata GN=matK PE=... 30 5.0
sp|P42846|KRI1_YEAST Protein KRI1 OS=Saccharomyces cerevisiae GN... 30 5.0
sp|Q9C0F0|ASXL3_HUMAN Putative Polycomb group protein ASXL3 OS=H... 30 5.0
sp|Q5ASA5|SET2_EMENI Histone-lysine N-methyltransferase, H3 lysi... 30 6.5
sp|P34230|PXA2_YEAST Peroxisomal long-chain fatty acid import pr... 30 6.5
sp|Q5REG6|ZC11A_PONAB Zinc finger CCCH domain-containing protein... 29 8.5
sp|P0C383|MATK_ORYSJ Maturase K OS=Oryza sativa subsp. japonica ... 29 8.5
sp|P0C382|MATK_ORYSI Maturase K OS=Oryza sativa subsp. indica GN... 29 8.5
sp|P0C381|MATK_ORYSA Maturase K OS=Oryza sativa GN=matK PE=2 SV=2 29 8.5
sp|Q6ENJ6|MATK_ORYNI Maturase K OS=Oryza nivara GN=matK PE=2 SV=3 29 8.5
sp|Q9BY15|EMR3_HUMAN EGF-like module-containing mucin-like hormo... 29 8.5
sp|Q8C4A5|ASXL3_MOUSE Putative Polycomb group protein ASXL3 OS=M... 29 8.5

>sp|P32568|SNQ2_YEAST Protein SNQ2 OS=Saccharomyces cerevisiae
GN=SNQ2 PE=1 SV=2
Length = 1501

Score = 34.3 bits (77), Expect = 0.27
Identities = 26/87 (29%), Positives = 35/87 (40%)
Frame = +3

Query: 54 IMALANVNFEHPPFLGLQKFYPLYLHPLVHLEGSMCIPTIHGSFLFQCCVLIHNYSSNIL 233
+M LAN++FEH P L K Y LY HP GS C +I + S +
Sbjct: 566 LMGLANISFEHRPILQKHKGYSLY-HPSAEAIGSTLASFPFRMIGLTCFFIILFFLSGLH 624

Query: 234 GYLCRFFFSWFYRWLLYH*NMGLFHFV 314
FF + + + GLF V
Sbjct: 625 RTAGSFFTIYLFLTMCSEAINGLFEMV 651


>sp|P53756|YN99_YEAST Uncharacterized ABC transporter ATP-binding
protein/permease YNR070W OS=Saccharomyces cerevisiae
GN=YNR070W PE=2 SV=1
Length = 1333

Score = 33.9 bits (76), Expect = 0.35
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +3

Query: 18 VTTFSCLHIAS*IMALANVNFEHPPFLGLQKFYPLYLHP 134
V FS L+ + +M LAN++FEH P L K Y LY HP
Sbjct: 427 VLFFSLLYYS--LMGLANISFEHRPILQKHKVYSLY-HP 462


>sp|P19199|POL_COYMV Putative polyprotein OS=Commelina yellow mottle
virus PE=4 SV=2
Length = 1886

Score = 32.3 bits (72), Expect = 1.0
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = -1

Query: 362 KGSSNKPNKKAATFFQ--DKVEQAHVSMIKEPSIEPREEEAAKVAQDIGAIIMDKDTTLE 189
K + K ++KA+ F + ++A +++IKE + +EE +AQ AII+ ++ T+E
Sbjct: 1112 KDEALKHSEKASRVFSTIQESDEAELNLIKEELRQFKEETRMAIAQLKEAIIVQEEDTIE 1171

Query: 188 EKGPMNSWDAH 156
E+ M + H
Sbjct: 1172 ERCAMILEEKH 1182


>sp|Q83IQ8|MDTO_SHIFL Multidrug resistance protein mdtO OS=Shigella
flexneri GN=mdtO PE=3 SV=5
Length = 680

Score = 31.6 bits (70), Expect = 1.7
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +1

Query: 169 LFMGPFSSNVVSLSIIIAPI--SWATFAASSSLGSIDGSFIIETWACSTLS*KNVAAFLF 342
L + P+ N+V L ++API A A SS S G+ ++ T+A +TL +NV ++
Sbjct: 414 LLVMPWLDNIVELLFVLAPIFLLGAWIATSSERSSYIGTQMVVTFALATL--ENVFGPVY 471

Query: 343 GLLEL 357
L+E+
Sbjct: 472 DLVEI 476


>sp|P32715|MDTO_ECOLI Multidrug resistance protein mdtO
OS=Escherichia coli (strain K12) GN=mdtO PE=3 SV=2
Length = 683

Score = 31.6 bits (70), Expect = 1.7
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +1

Query: 169 LFMGPFSSNVVSLSIIIAPI--SWATFAASSSLGSIDGSFIIETWACSTLS*KNVAAFLF 342
L + P+ N+V L ++API A A SS S G+ ++ T+A +TL +NV ++
Sbjct: 417 LLVMPWLDNIVELLFVLAPIFLLGAWIATSSERSSYIGTQMVVTFALATL--ENVFGPVY 474

Query: 343 GLLEL 357
L+E+
Sbjct: 475 DLVEI 479


>sp|Q8FAX2|MDTO_ECOL6 Multidrug resistance protein mdtO
OS=Escherichia coli O6 GN=mdtO PE=3 SV=1
Length = 683

Score = 31.6 bits (70), Expect = 1.7
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +1

Query: 169 LFMGPFSSNVVSLSIIIAPI--SWATFAASSSLGSIDGSFIIETWACSTLS*KNVAAFLF 342
L + P+ N+V L ++API A A SS S G+ ++ T+A +TL +NV ++
Sbjct: 417 LLVMPWLDNIVELLFVLAPIFLLGAWIATSSERSSYIGTQMVVTFALATL--ENVFGPVY 474

Query: 343 GLLEL 357
L+E+
Sbjct: 475 DLVEI 479


>sp|Q8X5R8|MDTO_ECO57 Multidrug resistance protein mdtO
OS=Escherichia coli O157:H7 GN=mdtO PE=3 SV=2
Length = 683

Score = 31.6 bits (70), Expect = 1.7
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +1

Query: 169 LFMGPFSSNVVSLSIIIAPI--SWATFAASSSLGSIDGSFIIETWACSTLS*KNVAAFLF 342
L + P+ N+V L ++API A A SS S G+ ++ T+A +TL +NV ++
Sbjct: 417 LLVMPWLDNIVELLFVLAPIFLLGAWIATSSERSSYIGTQMVVTFALATL--ENVFGPVY 474

Query: 343 GLLEL 357
L+E+
Sbjct: 475 DLVEI 479


>sp|Q9TKS6|MATK_SOYBN Maturase K OS=Glycine max GN=matK PE=3 SV=2
Length = 505

Score = 31.2 bits (69), Expect = 2.2
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Frame = +3

Query: 102 LQKFYPLYLHPLVHL--EGSMCIP-TIHGSFLFQCCVLIHNYSSNILGYLCRFFFSWFYR 272
+ +P + L++L E + IP IH L Q +L + +L RFFFS++Y
Sbjct: 127 IHSIFPFFEDKLIYLNHESDIRIPYPIHLEILVQ--ILRYWIKDVSFFHLLRFFFSYYYN 184

Query: 273 W-LLYH*NMGLFHFVLKERCCFFVWLVGATLGEY 371
W ++ + F K FF++L + EY
Sbjct: 185 WNSIFTPKKWISTFFSKSNPRFFLFLYNLYVWEY 218


>sp|P45931|YQBO_BACSU Uncharacterized protein yqbO OS=Bacillus
subtilis GN=yqbO PE=1 SV=1
Length = 1585

Score = 30.8 bits (68), Expect = 2.9
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 9/52 (17%)
Frame = -1

Query: 206 KDTTLEEKGPMNSWDAHRALQVNKWMQIKWI---------ELLKSKKWWMLK 78
K T EK W++ ++ NKW K I E L SKKWW K
Sbjct: 933 KSTLFSEKWWSGKWESVKSWSKNKWDNAKSIWKSVKSSISETLFSKKWWSEK 984


>sp|Q4FLS9|RNC_PELUB Ribonuclease 3 OS=Pelagibacter ubique GN=rnc
PE=3 SV=1
Length = 222

Score = 30.8 bits (68), Expect = 2.9
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Frame = -1

Query: 371 ILSKGSSNKPNKKAATFFQDKVEQAHVSMIKEPSIEPREEEAAKVAQD----IGAIIMDK 204
+L K ++ NKK K+E ++ P + E E VA IGAI +DK
Sbjct: 67 VLDKKFASLVNKKKCLEIAKKIELEKYILVLNPKNKKIEIEDKIVADCLEALIGAIYLDK 126

Query: 203 DTTLEEKGPMNSWDAH 156
E+ +N W H
Sbjct: 127 GLNFTERFILNLWSEH 142


tr_hit_id B7LMN2
Definition tr|B7LMN2|B7LMN2_ESCFE Multidrug resistance protein MdtO OS=Escherichia fergusonii
Align length 65
Score (bit) 37.4
E-value 0.37
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918913|Adiantum capillus-veneris mRNA, clone:
YMU001_000118_H11.
(461 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B7LMN2|B7LMN2_ESCFE Multidrug resistance protein MdtO OS=Esch... 37 0.37
tr|Q4S7X0|Q4S7X0_TETNG Chromosome 9 SCAF14710, whole genome shot... 35 1.9
tr|Q9P8I2|Q9P8I2_CANGA ABC-transporter SNQ2 homolog (Fragment) O... 35 1.9
tr|Q6FQN3|Q6FQN3_CANGA Strain CBS138 chromosome I complete seque... 35 1.9
tr|A7WPC8|A7WPC8_CANGA ABC-transporter OS=Candida glabrata GN=sn... 35 1.9
tr|A8GHS1|A8GHS1_SERP5 Major facilitator superfamily MFS_1 OS=Se... 35 2.4
tr|A7QF18|A7QF18_VITVI Chromosome chr16 scaffold_86, whole genom... 35 2.4
tr|Q22DB9|Q22DB9_TETTH Putative uncharacterized protein OS=Tetra... 35 2.4
tr|A8WVH3|A8WVH3_CAEBR Putative uncharacterized protein OS=Caeno... 35 2.4
tr|B6JNM4|B6JNM4_HELP2 Relaxase OS=Helicobacter pylori (strain P... 29 2.6
tr|O25644|O25644_HELPY Putative uncharacterized protein OS=Helic... 29 2.6
tr|Q5XQQ0|Q5XQQ0_SACKU SNQ2 OS=Saccharomyces kudriavzevii IFO 18... 34 3.2
tr|B5VFR8|B5VFR8_YEAS6 YDR011Wp-like protein (Fragment) OS=Sacch... 34 3.2
tr|B7K9G4|B7K9G4_9CHRO Putative uncharacterized protein OS=Cyano... 34 4.1
tr|B5VR95|B5VR95_YEAS6 YNR070Wp-like protein OS=Saccharomyces ce... 34 4.1
tr|B3LPH4|B3LPH4_YEAS1 Protein SNQ2 OS=Saccharomyces cerevisiae ... 34 4.1
tr|A6ZSE4|A6ZSE4_YEAS7 Conserved protein OS=Saccharomyces cerevi... 34 4.1
tr|Q86JE2|Q86JE2_DICDI Similar to Dictyostelium discoideum (Slim... 33 5.4
tr|Q1ZXN6|Q1ZXN6_DICDI Pleckstrin homology (PH) domain-containin... 33 5.4
tr|A6ZXX5|A6ZXX5_YEAS7 Putative uncharacterized protein OS=Sacch... 33 5.4
tr|B5XSS9|B5XSS9_KLEP3 Transporter, major facilitator family OS=... 33 7.0
tr|A6TEN1|A6TEN1_KLEP7 Putative transport protein OS=Klebsiella ... 33 7.0
tr|A0Q097|A0Q097_CLONN Stage III sporulation protein AH OS=Clost... 33 7.0
tr|B1B9B0|B1B9B0_CLOBO Stage III sporulation protein AH OS=Clost... 33 7.0
tr|B0ZB38|B0ZB38_SOYBN Maturase K (Fragment) OS=Glycine max GN=m... 33 7.0
tr|Q4PF36|Q4PF36_USTMA Putative uncharacterized protein OS=Ustil... 33 7.0
tr|B2WNB8|B2WNB8_PYRTR Predicted protein OS=Pyrenophora tritici-... 33 7.0
tr|Q0P187|Q0P187_ORYSI Mutator-like transposase OS=Oryza sativa ... 33 9.2
tr|B0X2R9|B0X2R9_CULQU Putative uncharacterized protein OS=Culex... 33 9.2

>tr|B7LMN2|B7LMN2_ESCFE Multidrug resistance protein MdtO
OS=Escherichia fergusonii GN=EFER_4290 PE=4 SV=1
Length = 668

Score = 37.4 bits (85), Expect = 0.37
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +1

Query: 169 LFMGPFSSNVVSLSIIIAPISW--ATFAASSSLGSIDGSFIIETWACSTLS*KNVAAFLF 342
+F+ P+ N+V L ++API W A A SS S G+ ++ T+A +TL +NV +
Sbjct: 417 IFVMPWLDNIVELLCVLAPIFWIGARLATSSERSSYIGTQMVVTFALATL--ENVFGPAY 474

Query: 343 GLLEL 357
L+E+
Sbjct: 475 DLVEI 479


>tr|Q4S7X0|Q4S7X0_TETNG Chromosome 9 SCAF14710, whole genome shotgun
sequence OS=Tetraodon nigroviridis GN=GSTENG00022600001
PE=4 SV=1
Length = 4006

Score = 35.0 bits (79), Expect = 1.9
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = -3

Query: 411 GQNNLLMSSLATQHTLQG*LQQAKQKSSNVLSRQSGTSPCFNDKGAIYRTKRRRSGKGSP 232
G LL+SSLA Q G L ++ L R++ T C+ D G +Y ++R P
Sbjct: 7 GFTPLLLSSLALQLLFLGPLFALTSGTTGGLPRRATTGHCYRDAGQVYEQRQREDAGEPP 66

Query: 231 R 229
R
Sbjct: 67 R 67


>tr|Q9P8I2|Q9P8I2_CANGA ABC-transporter SNQ2 homolog (Fragment)
OS=Candida glabrata PE=4 SV=1
Length = 192

Score = 35.0 bits (79), Expect = 1.9
Identities = 25/68 (36%), Positives = 30/68 (44%)
Frame = +3

Query: 54 IMALANVNFEHPPFLGLQKFYPLYLHPLVHLEGSMCIPTIHGSFLFQCCVLIHNYSSNIL 233
+M LAN++FEH P L K Y LY HP GS I + C LI Y + L
Sbjct: 48 LMGLANLSFEHRPILQKHKIYSLY-HPAAEALGS-TIANFPFRMIGMTCFLIIIYFLSGL 105

Query: 234 GYLCRFFF 257
FF
Sbjct: 106 NRTASSFF 113


>tr|Q6FQN3|Q6FQN3_CANGA Strain CBS138 chromosome I complete sequence
OS=Candida glabrata GN=CAGL0I04862g PE=3 SV=1
Length = 1507

Score = 35.0 bits (79), Expect = 1.9
Identities = 25/68 (36%), Positives = 30/68 (44%)
Frame = +3

Query: 54 IMALANVNFEHPPFLGLQKFYPLYLHPLVHLEGSMCIPTIHGSFLFQCCVLIHNYSSNIL 233
+M LAN++FEH P L K Y LY HP GS I + C LI Y + L
Sbjct: 568 LMGLANLSFEHRPILQKHKIYSLY-HPAAEALGS-TIANFPFRMIGMTCFLIIIYFLSGL 625

Query: 234 GYLCRFFF 257
FF
Sbjct: 626 NRTASSFF 633


>tr|A7WPC8|A7WPC8_CANGA ABC-transporter OS=Candida glabrata GN=snq2
PE=3 SV=1
Length = 1507

Score = 35.0 bits (79), Expect = 1.9
Identities = 25/68 (36%), Positives = 30/68 (44%)
Frame = +3

Query: 54 IMALANVNFEHPPFLGLQKFYPLYLHPLVHLEGSMCIPTIHGSFLFQCCVLIHNYSSNIL 233
+M LAN++FEH P L K Y LY HP GS I + C LI Y + L
Sbjct: 568 LMGLANLSFEHRPILQKHKIYSLY-HPAAEALGS-TIANFPFRMIGMTCFLIIIYFLSGL 625

Query: 234 GYLCRFFF 257
FF
Sbjct: 626 NRTASSFF 633


>tr|A8GHS1|A8GHS1_SERP5 Major facilitator superfamily MFS_1
OS=Serratia proteamaculans (strain 568) GN=Spro_3565
PE=4 SV=1
Length = 429

Score = 34.7 bits (78), Expect = 2.4
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +3

Query: 177 GSFLFQCCVLIHNYSSNILGYLCRFFFSWFYRWLLYH*NMGLFHFVLKERCCFFVWLVGA 356
G +L Q +L+ ++ Y+ FF SWF +L+ N+ + L + V VG
Sbjct: 223 GYYLKQPIILVTAFAFFCYNYILFFFLSWFPSYLVQAHNLNIKEMSLTTMIPWIVGFVGL 282

Query: 357 TLGEYV 374
LG Y+
Sbjct: 283 ALGGYI 288


>tr|A7QF18|A7QF18_VITVI Chromosome chr16 scaffold_86, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00037241001
PE=4 SV=1
Length = 494

Score = 34.7 bits (78), Expect = 2.4
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Frame = -1

Query: 338 KKAATFFQDKVEQAHVSMIKEPSIEPREEEAAKVAQDIGAIIMDKDT-----TLEEKGPM 174
KK A FF D+ +A + +KE + + + I DKD T E+ P+
Sbjct: 127 KKNADFFLDRSRKASAASMKEDQFARMSKPKIGLHSNPQDIGKDKDIEELWYTDEDLDPV 186

Query: 173 NSWDAHRALQVNKWMQIKWIELLKSKKWW 87
NS + ++ +++ ++ W+ K++ WW
Sbjct: 187 NSLVSEQSKKLSSDLESHWMGAEKTEPWW 215


>tr|Q22DB9|Q22DB9_TETTH Putative uncharacterized protein
OS=Tetrahymena thermophila SB210 GN=TTHERM_00992830 PE=4
SV=1
Length = 662

Score = 34.7 bits (78), Expect = 2.4
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = -1

Query: 368 LSKGSSNKPNKKAATFFQDKVEQAHVSMIKEPSIEPREEEAAKVAQDIGAIIMDKD 201
L+K S NKP +K ++ QD E H +EP+++ EE+ A +++ +D++
Sbjct: 80 LTKTSENKPTEKQSS--QDAAESEHNKKKEEPNVDMEEEQPADEQEEVDEANIDEE 133


>tr|A8WVH3|A8WVH3_CAEBR Putative uncharacterized protein
OS=Caenorhabditis briggsae GN=CBG03627 PE=4 SV=1
Length = 1303

Score = 34.7 bits (78), Expect = 2.4
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = -2

Query: 460 GLKRKDEEREETAKIKRPK*FANELFSNSTYSPRVAPTSQTKKQQRSFKTKWNK 299
G KR E EE IKR + S+S +PR + S+ K + S KW+K
Sbjct: 1240 GAKRYREPSEERPAIKRKSLETDSTISSSFSTPRASADSEVKNMETSTAEKWSK 1293


>tr|B6JNM4|B6JNM4_HELP2 Relaxase OS=Helicobacter pylori (strain P12)
GN=virD2-2 PE=4 SV=1
Length = 677

Score = 29.3 bits (64), Expect(2) = 2.6
Identities = 12/50 (24%), Positives = 26/50 (52%)
Frame = -1

Query: 266 EPREEEAAKVAQDIGAIIMDKDTTLEEKGPMNSWDAHRALQVNKWMQIKW 117
EP+ +E + Q + + ++ + K P + WD ++ALQ ++K+
Sbjct: 228 EPKLKELDNIKQQLQDLEKEEKALEQIKSPQDEWDLNKALQSEYLQELKY 277



Score = 24.3 bits (51), Expect(2) = 2.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3

Query: 141 EQVDADKVDRTSEVQEMVDAQNSH 70
EQ+D D++D+ V E + N H
Sbjct: 317 EQLDIDRIDKRKPVSEHLKNTNKH 340