BP918913 |
Clone id |
YMU001_000118_H11 |
Library |
YMU01 |
Length |
461 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000118_H11. |
Accession |
BP918913 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TATTTTTTCTCTTCATGGTGACAACATTTTCTTGTTTACATATTGCTTCTTAGATTATGG CTCTTGCAAATGTGAATTTTGAGCATCCACCATTTCTTGGACTTCAGAAGTTCTATCCAC TTTATCTGCATCCACTTGTTCACTTGGAGGGCTCTATGTGCATCCCAACTATTCATGGGT CCTTTCTCTTCCAATGTTGTGTCCTTATCCATAATTATAGCTCCAATATCTTGGGCTACC TTTGCCGCTTCTTCTTCTCTTGGTTCTATAGATGGCTCCTTTATCATTGAAACATGGGCT TGTTCCACTTTGTCTTGAAAGAACGTTGCTGCTTTTTTGTTTGGCTTGTTGGAGCTACCC TTGGAGAGTATGTTGAGTTGCTAAAGAGCTCATTAGCAAATTATTTTGGCCTTTTTATCT TAGCAGTCTCCTCTCTTTCCTCATCTTTTCTCTTCAATCCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P32568 |
Definition |
sp|P32568|SNQ2_YEAST Protein SNQ2 OS=Saccharomyces cerevisiae |
Align length |
87 |
Score (bit) |
34.3 |
E-value |
0.27 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918913|Adiantum capillus-veneris mRNA, clone: YMU001_000118_H11. (461 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P32568|SNQ2_YEAST Protein SNQ2 OS=Saccharomyces cerevisiae GN... 34 0.27 sp|P53756|YN99_YEAST Uncharacterized ABC transporter ATP-binding... 34 0.35 sp|P19199|POL_COYMV Putative polyprotein OS=Commelina yellow mot... 32 1.0 sp|Q83IQ8|MDTO_SHIFL Multidrug resistance protein mdtO OS=Shigel... 32 1.7 sp|P32715|MDTO_ECOLI Multidrug resistance protein mdtO OS=Escher... 32 1.7 sp|Q8FAX2|MDTO_ECOL6 Multidrug resistance protein mdtO OS=Escher... 32 1.7 sp|Q8X5R8|MDTO_ECO57 Multidrug resistance protein mdtO OS=Escher... 32 1.7 sp|Q9TKS6|MATK_SOYBN Maturase K OS=Glycine max GN=matK PE=3 SV=2 31 2.2 sp|P45931|YQBO_BACSU Uncharacterized protein yqbO OS=Bacillus su... 31 2.9 sp|Q4FLS9|RNC_PELUB Ribonuclease 3 OS=Pelagibacter ubique GN=rnc... 31 2.9 sp|Q00416|SEN1_YEAST Helicase SEN1 OS=Saccharomyces cerevisiae G... 30 5.0 sp|Q6PP78|MATK_VIGUN Maturase K OS=Vigna unguiculata GN=matK PE=... 30 5.0 sp|P42846|KRI1_YEAST Protein KRI1 OS=Saccharomyces cerevisiae GN... 30 5.0 sp|Q9C0F0|ASXL3_HUMAN Putative Polycomb group protein ASXL3 OS=H... 30 5.0 sp|Q5ASA5|SET2_EMENI Histone-lysine N-methyltransferase, H3 lysi... 30 6.5 sp|P34230|PXA2_YEAST Peroxisomal long-chain fatty acid import pr... 30 6.5 sp|Q5REG6|ZC11A_PONAB Zinc finger CCCH domain-containing protein... 29 8.5 sp|P0C383|MATK_ORYSJ Maturase K OS=Oryza sativa subsp. japonica ... 29 8.5 sp|P0C382|MATK_ORYSI Maturase K OS=Oryza sativa subsp. indica GN... 29 8.5 sp|P0C381|MATK_ORYSA Maturase K OS=Oryza sativa GN=matK PE=2 SV=2 29 8.5 sp|Q6ENJ6|MATK_ORYNI Maturase K OS=Oryza nivara GN=matK PE=2 SV=3 29 8.5 sp|Q9BY15|EMR3_HUMAN EGF-like module-containing mucin-like hormo... 29 8.5 sp|Q8C4A5|ASXL3_MOUSE Putative Polycomb group protein ASXL3 OS=M... 29 8.5
>sp|P32568|SNQ2_YEAST Protein SNQ2 OS=Saccharomyces cerevisiae GN=SNQ2 PE=1 SV=2 Length = 1501
Score = 34.3 bits (77), Expect = 0.27 Identities = 26/87 (29%), Positives = 35/87 (40%) Frame = +3
Query: 54 IMALANVNFEHPPFLGLQKFYPLYLHPLVHLEGSMCIPTIHGSFLFQCCVLIHNYSSNIL 233 +M LAN++FEH P L K Y LY HP GS C +I + S + Sbjct: 566 LMGLANISFEHRPILQKHKGYSLY-HPSAEAIGSTLASFPFRMIGLTCFFIILFFLSGLH 624
Query: 234 GYLCRFFFSWFYRWLLYH*NMGLFHFV 314 FF + + + GLF V Sbjct: 625 RTAGSFFTIYLFLTMCSEAINGLFEMV 651
>sp|P53756|YN99_YEAST Uncharacterized ABC transporter ATP-binding protein/permease YNR070W OS=Saccharomyces cerevisiae GN=YNR070W PE=2 SV=1 Length = 1333
Score = 33.9 bits (76), Expect = 0.35 Identities = 19/39 (48%), Positives = 24/39 (61%) Frame = +3
Query: 18 VTTFSCLHIAS*IMALANVNFEHPPFLGLQKFYPLYLHP 134 V FS L+ + +M LAN++FEH P L K Y LY HP Sbjct: 427 VLFFSLLYYS--LMGLANISFEHRPILQKHKVYSLY-HP 462
>sp|P19199|POL_COYMV Putative polyprotein OS=Commelina yellow mottle virus PE=4 SV=2 Length = 1886
Score = 32.3 bits (72), Expect = 1.0 Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 2/71 (2%) Frame = -1
Query: 362 KGSSNKPNKKAATFFQ--DKVEQAHVSMIKEPSIEPREEEAAKVAQDIGAIIMDKDTTLE 189 K + K ++KA+ F + ++A +++IKE + +EE +AQ AII+ ++ T+E Sbjct: 1112 KDEALKHSEKASRVFSTIQESDEAELNLIKEELRQFKEETRMAIAQLKEAIIVQEEDTIE 1171
Query: 188 EKGPMNSWDAH 156 E+ M + H Sbjct: 1172 ERCAMILEEKH 1182
>sp|Q83IQ8|MDTO_SHIFL Multidrug resistance protein mdtO OS=Shigella flexneri GN=mdtO PE=3 SV=5 Length = 680
Score = 31.6 bits (70), Expect = 1.7 Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 2/65 (3%) Frame = +1
Query: 169 LFMGPFSSNVVSLSIIIAPI--SWATFAASSSLGSIDGSFIIETWACSTLS*KNVAAFLF 342 L + P+ N+V L ++API A A SS S G+ ++ T+A +TL +NV ++ Sbjct: 414 LLVMPWLDNIVELLFVLAPIFLLGAWIATSSERSSYIGTQMVVTFALATL--ENVFGPVY 471
Query: 343 GLLEL 357 L+E+ Sbjct: 472 DLVEI 476
>sp|P32715|MDTO_ECOLI Multidrug resistance protein mdtO OS=Escherichia coli (strain K12) GN=mdtO PE=3 SV=2 Length = 683
Score = 31.6 bits (70), Expect = 1.7 Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 2/65 (3%) Frame = +1
Query: 169 LFMGPFSSNVVSLSIIIAPI--SWATFAASSSLGSIDGSFIIETWACSTLS*KNVAAFLF 342 L + P+ N+V L ++API A A SS S G+ ++ T+A +TL +NV ++ Sbjct: 417 LLVMPWLDNIVELLFVLAPIFLLGAWIATSSERSSYIGTQMVVTFALATL--ENVFGPVY 474
Query: 343 GLLEL 357 L+E+ Sbjct: 475 DLVEI 479
>sp|Q8FAX2|MDTO_ECOL6 Multidrug resistance protein mdtO OS=Escherichia coli O6 GN=mdtO PE=3 SV=1 Length = 683
Score = 31.6 bits (70), Expect = 1.7 Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 2/65 (3%) Frame = +1
Query: 169 LFMGPFSSNVVSLSIIIAPI--SWATFAASSSLGSIDGSFIIETWACSTLS*KNVAAFLF 342 L + P+ N+V L ++API A A SS S G+ ++ T+A +TL +NV ++ Sbjct: 417 LLVMPWLDNIVELLFVLAPIFLLGAWIATSSERSSYIGTQMVVTFALATL--ENVFGPVY 474
Query: 343 GLLEL 357 L+E+ Sbjct: 475 DLVEI 479
>sp|Q8X5R8|MDTO_ECO57 Multidrug resistance protein mdtO OS=Escherichia coli O157:H7 GN=mdtO PE=3 SV=2 Length = 683
Score = 31.6 bits (70), Expect = 1.7 Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 2/65 (3%) Frame = +1
Query: 169 LFMGPFSSNVVSLSIIIAPI--SWATFAASSSLGSIDGSFIIETWACSTLS*KNVAAFLF 342 L + P+ N+V L ++API A A SS S G+ ++ T+A +TL +NV ++ Sbjct: 417 LLVMPWLDNIVELLFVLAPIFLLGAWIATSSERSSYIGTQMVVTFALATL--ENVFGPVY 474
Query: 343 GLLEL 357 L+E+ Sbjct: 475 DLVEI 479
>sp|Q9TKS6|MATK_SOYBN Maturase K OS=Glycine max GN=matK PE=3 SV=2 Length = 505
Score = 31.2 bits (69), Expect = 2.2 Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 4/94 (4%) Frame = +3
Query: 102 LQKFYPLYLHPLVHL--EGSMCIP-TIHGSFLFQCCVLIHNYSSNILGYLCRFFFSWFYR 272 + +P + L++L E + IP IH L Q +L + +L RFFFS++Y Sbjct: 127 IHSIFPFFEDKLIYLNHESDIRIPYPIHLEILVQ--ILRYWIKDVSFFHLLRFFFSYYYN 184
Query: 273 W-LLYH*NMGLFHFVLKERCCFFVWLVGATLGEY 371 W ++ + F K FF++L + EY Sbjct: 185 WNSIFTPKKWISTFFSKSNPRFFLFLYNLYVWEY 218
>sp|P45931|YQBO_BACSU Uncharacterized protein yqbO OS=Bacillus subtilis GN=yqbO PE=1 SV=1 Length = 1585
Score = 30.8 bits (68), Expect = 2.9 Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 9/52 (17%) Frame = -1
Query: 206 KDTTLEEKGPMNSWDAHRALQVNKWMQIKWI---------ELLKSKKWWMLK 78 K T EK W++ ++ NKW K I E L SKKWW K Sbjct: 933 KSTLFSEKWWSGKWESVKSWSKNKWDNAKSIWKSVKSSISETLFSKKWWSEK 984
>sp|Q4FLS9|RNC_PELUB Ribonuclease 3 OS=Pelagibacter ubique GN=rnc PE=3 SV=1 Length = 222
Score = 30.8 bits (68), Expect = 2.9 Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 4/76 (5%) Frame = -1
Query: 371 ILSKGSSNKPNKKAATFFQDKVEQAHVSMIKEPSIEPREEEAAKVAQD----IGAIIMDK 204 +L K ++ NKK K+E ++ P + E E VA IGAI +DK Sbjct: 67 VLDKKFASLVNKKKCLEIAKKIELEKYILVLNPKNKKIEIEDKIVADCLEALIGAIYLDK 126
Query: 203 DTTLEEKGPMNSWDAH 156 E+ +N W H Sbjct: 127 GLNFTERFILNLWSEH 142
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B7LMN2 |
Definition |
tr|B7LMN2|B7LMN2_ESCFE Multidrug resistance protein MdtO OS=Escherichia fergusonii |
Align length |
65 |
Score (bit) |
37.4 |
E-value |
0.37 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918913|Adiantum capillus-veneris mRNA, clone: YMU001_000118_H11. (461 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B7LMN2|B7LMN2_ESCFE Multidrug resistance protein MdtO OS=Esch... 37 0.37 tr|Q4S7X0|Q4S7X0_TETNG Chromosome 9 SCAF14710, whole genome shot... 35 1.9 tr|Q9P8I2|Q9P8I2_CANGA ABC-transporter SNQ2 homolog (Fragment) O... 35 1.9 tr|Q6FQN3|Q6FQN3_CANGA Strain CBS138 chromosome I complete seque... 35 1.9 tr|A7WPC8|A7WPC8_CANGA ABC-transporter OS=Candida glabrata GN=sn... 35 1.9 tr|A8GHS1|A8GHS1_SERP5 Major facilitator superfamily MFS_1 OS=Se... 35 2.4 tr|A7QF18|A7QF18_VITVI Chromosome chr16 scaffold_86, whole genom... 35 2.4 tr|Q22DB9|Q22DB9_TETTH Putative uncharacterized protein OS=Tetra... 35 2.4 tr|A8WVH3|A8WVH3_CAEBR Putative uncharacterized protein OS=Caeno... 35 2.4 tr|B6JNM4|B6JNM4_HELP2 Relaxase OS=Helicobacter pylori (strain P... 29 2.6 tr|O25644|O25644_HELPY Putative uncharacterized protein OS=Helic... 29 2.6 tr|Q5XQQ0|Q5XQQ0_SACKU SNQ2 OS=Saccharomyces kudriavzevii IFO 18... 34 3.2 tr|B5VFR8|B5VFR8_YEAS6 YDR011Wp-like protein (Fragment) OS=Sacch... 34 3.2 tr|B7K9G4|B7K9G4_9CHRO Putative uncharacterized protein OS=Cyano... 34 4.1 tr|B5VR95|B5VR95_YEAS6 YNR070Wp-like protein OS=Saccharomyces ce... 34 4.1 tr|B3LPH4|B3LPH4_YEAS1 Protein SNQ2 OS=Saccharomyces cerevisiae ... 34 4.1 tr|A6ZSE4|A6ZSE4_YEAS7 Conserved protein OS=Saccharomyces cerevi... 34 4.1 tr|Q86JE2|Q86JE2_DICDI Similar to Dictyostelium discoideum (Slim... 33 5.4 tr|Q1ZXN6|Q1ZXN6_DICDI Pleckstrin homology (PH) domain-containin... 33 5.4 tr|A6ZXX5|A6ZXX5_YEAS7 Putative uncharacterized protein OS=Sacch... 33 5.4 tr|B5XSS9|B5XSS9_KLEP3 Transporter, major facilitator family OS=... 33 7.0 tr|A6TEN1|A6TEN1_KLEP7 Putative transport protein OS=Klebsiella ... 33 7.0 tr|A0Q097|A0Q097_CLONN Stage III sporulation protein AH OS=Clost... 33 7.0 tr|B1B9B0|B1B9B0_CLOBO Stage III sporulation protein AH OS=Clost... 33 7.0 tr|B0ZB38|B0ZB38_SOYBN Maturase K (Fragment) OS=Glycine max GN=m... 33 7.0 tr|Q4PF36|Q4PF36_USTMA Putative uncharacterized protein OS=Ustil... 33 7.0 tr|B2WNB8|B2WNB8_PYRTR Predicted protein OS=Pyrenophora tritici-... 33 7.0 tr|Q0P187|Q0P187_ORYSI Mutator-like transposase OS=Oryza sativa ... 33 9.2 tr|B0X2R9|B0X2R9_CULQU Putative uncharacterized protein OS=Culex... 33 9.2
>tr|B7LMN2|B7LMN2_ESCFE Multidrug resistance protein MdtO OS=Escherichia fergusonii GN=EFER_4290 PE=4 SV=1 Length = 668
Score = 37.4 bits (85), Expect = 0.37 Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 2/65 (3%) Frame = +1
Query: 169 LFMGPFSSNVVSLSIIIAPISW--ATFAASSSLGSIDGSFIIETWACSTLS*KNVAAFLF 342 +F+ P+ N+V L ++API W A A SS S G+ ++ T+A +TL +NV + Sbjct: 417 IFVMPWLDNIVELLCVLAPIFWIGARLATSSERSSYIGTQMVVTFALATL--ENVFGPAY 474
Query: 343 GLLEL 357 L+E+ Sbjct: 475 DLVEI 479
>tr|Q4S7X0|Q4S7X0_TETNG Chromosome 9 SCAF14710, whole genome shotgun sequence OS=Tetraodon nigroviridis GN=GSTENG00022600001 PE=4 SV=1 Length = 4006
Score = 35.0 bits (79), Expect = 1.9 Identities = 20/61 (32%), Positives = 29/61 (47%) Frame = -3
Query: 411 GQNNLLMSSLATQHTLQG*LQQAKQKSSNVLSRQSGTSPCFNDKGAIYRTKRRRSGKGSP 232 G LL+SSLA Q G L ++ L R++ T C+ D G +Y ++R P Sbjct: 7 GFTPLLLSSLALQLLFLGPLFALTSGTTGGLPRRATTGHCYRDAGQVYEQRQREDAGEPP 66
Query: 231 R 229 R Sbjct: 67 R 67
>tr|Q9P8I2|Q9P8I2_CANGA ABC-transporter SNQ2 homolog (Fragment) OS=Candida glabrata PE=4 SV=1 Length = 192
Score = 35.0 bits (79), Expect = 1.9 Identities = 25/68 (36%), Positives = 30/68 (44%) Frame = +3
Query: 54 IMALANVNFEHPPFLGLQKFYPLYLHPLVHLEGSMCIPTIHGSFLFQCCVLIHNYSSNIL 233 +M LAN++FEH P L K Y LY HP GS I + C LI Y + L Sbjct: 48 LMGLANLSFEHRPILQKHKIYSLY-HPAAEALGS-TIANFPFRMIGMTCFLIIIYFLSGL 105
Query: 234 GYLCRFFF 257 FF Sbjct: 106 NRTASSFF 113
>tr|Q6FQN3|Q6FQN3_CANGA Strain CBS138 chromosome I complete sequence OS=Candida glabrata GN=CAGL0I04862g PE=3 SV=1 Length = 1507
Score = 35.0 bits (79), Expect = 1.9 Identities = 25/68 (36%), Positives = 30/68 (44%) Frame = +3
Query: 54 IMALANVNFEHPPFLGLQKFYPLYLHPLVHLEGSMCIPTIHGSFLFQCCVLIHNYSSNIL 233 +M LAN++FEH P L K Y LY HP GS I + C LI Y + L Sbjct: 568 LMGLANLSFEHRPILQKHKIYSLY-HPAAEALGS-TIANFPFRMIGMTCFLIIIYFLSGL 625
Query: 234 GYLCRFFF 257 FF Sbjct: 626 NRTASSFF 633
>tr|A7WPC8|A7WPC8_CANGA ABC-transporter OS=Candida glabrata GN=snq2 PE=3 SV=1 Length = 1507
Score = 35.0 bits (79), Expect = 1.9 Identities = 25/68 (36%), Positives = 30/68 (44%) Frame = +3
Query: 54 IMALANVNFEHPPFLGLQKFYPLYLHPLVHLEGSMCIPTIHGSFLFQCCVLIHNYSSNIL 233 +M LAN++FEH P L K Y LY HP GS I + C LI Y + L Sbjct: 568 LMGLANLSFEHRPILQKHKIYSLY-HPAAEALGS-TIANFPFRMIGMTCFLIIIYFLSGL 625
Query: 234 GYLCRFFF 257 FF Sbjct: 626 NRTASSFF 633
>tr|A8GHS1|A8GHS1_SERP5 Major facilitator superfamily MFS_1 OS=Serratia proteamaculans (strain 568) GN=Spro_3565 PE=4 SV=1 Length = 429
Score = 34.7 bits (78), Expect = 2.4 Identities = 19/66 (28%), Positives = 31/66 (46%) Frame = +3
Query: 177 GSFLFQCCVLIHNYSSNILGYLCRFFFSWFYRWLLYH*NMGLFHFVLKERCCFFVWLVGA 356 G +L Q +L+ ++ Y+ FF SWF +L+ N+ + L + V VG Sbjct: 223 GYYLKQPIILVTAFAFFCYNYILFFFLSWFPSYLVQAHNLNIKEMSLTTMIPWIVGFVGL 282
Query: 357 TLGEYV 374 LG Y+ Sbjct: 283 ALGGYI 288
>tr|A7QF18|A7QF18_VITVI Chromosome chr16 scaffold_86, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037241001 PE=4 SV=1 Length = 494
Score = 34.7 bits (78), Expect = 2.4 Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 5/89 (5%) Frame = -1
Query: 338 KKAATFFQDKVEQAHVSMIKEPSIEPREEEAAKVAQDIGAIIMDKDT-----TLEEKGPM 174 KK A FF D+ +A + +KE + + + I DKD T E+ P+ Sbjct: 127 KKNADFFLDRSRKASAASMKEDQFARMSKPKIGLHSNPQDIGKDKDIEELWYTDEDLDPV 186
Query: 173 NSWDAHRALQVNKWMQIKWIELLKSKKWW 87 NS + ++ +++ ++ W+ K++ WW Sbjct: 187 NSLVSEQSKKLSSDLESHWMGAEKTEPWW 215
>tr|Q22DB9|Q22DB9_TETTH Putative uncharacterized protein OS=Tetrahymena thermophila SB210 GN=TTHERM_00992830 PE=4 SV=1 Length = 662
Score = 34.7 bits (78), Expect = 2.4 Identities = 17/56 (30%), Positives = 32/56 (57%) Frame = -1
Query: 368 LSKGSSNKPNKKAATFFQDKVEQAHVSMIKEPSIEPREEEAAKVAQDIGAIIMDKD 201 L+K S NKP +K ++ QD E H +EP+++ EE+ A +++ +D++ Sbjct: 80 LTKTSENKPTEKQSS--QDAAESEHNKKKEEPNVDMEEEQPADEQEEVDEANIDEE 133
>tr|A8WVH3|A8WVH3_CAEBR Putative uncharacterized protein OS=Caenorhabditis briggsae GN=CBG03627 PE=4 SV=1 Length = 1303
Score = 34.7 bits (78), Expect = 2.4 Identities = 19/54 (35%), Positives = 26/54 (48%) Frame = -2
Query: 460 GLKRKDEEREETAKIKRPK*FANELFSNSTYSPRVAPTSQTKKQQRSFKTKWNK 299 G KR E EE IKR + S+S +PR + S+ K + S KW+K Sbjct: 1240 GAKRYREPSEERPAIKRKSLETDSTISSSFSTPRASADSEVKNMETSTAEKWSK 1293
>tr|B6JNM4|B6JNM4_HELP2 Relaxase OS=Helicobacter pylori (strain P12) GN=virD2-2 PE=4 SV=1 Length = 677
Score = 29.3 bits (64), Expect(2) = 2.6 Identities = 12/50 (24%), Positives = 26/50 (52%) Frame = -1
Query: 266 EPREEEAAKVAQDIGAIIMDKDTTLEEKGPMNSWDAHRALQVNKWMQIKW 117 EP+ +E + Q + + ++ + K P + WD ++ALQ ++K+ Sbjct: 228 EPKLKELDNIKQQLQDLEKEEKALEQIKSPQDEWDLNKALQSEYLQELKY 277
Score = 24.3 bits (51), Expect(2) = 2.6 Identities = 9/24 (37%), Positives = 14/24 (58%) Frame = -3
Query: 141 EQVDADKVDRTSEVQEMVDAQNSH 70 EQ+D D++D+ V E + N H Sbjct: 317 EQLDIDRIDKRKPVSEHLKNTNKH 340
|