BP918915 |
Clone id |
YMU001_000119_A02 |
Library |
YMU01 |
Length |
509 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000119_A02. |
Accession |
BP918915 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GATTAGGACAGTTGAGAGGCATTGCTCGGCTTGTCATAGTTGTGGGTCCTGCCTCGCACT TGGAAGAAGCTTGCAGAGCTAGTGAGCCTTACTTCCTCCAGCTGGTGGAAAGAGGAGTTG CGGTAATTTCATTTGCAACAGATGGCCAAGTGCCAAACCTGGAATATTCTGCTGACAACG AGTCCAAGGATGAGTCTGAAGGGGCTTCTGTTAAAGCAGAAAAGCTTTGGAGAGGCGTTC CCATTTACACAACAGAATGGACAAGATGGCTGATGGAGCAGAAGAAGCTTGCAAACGTAC CAGCGGACTCCCCAGTGTATCTATCCCTTCGCTTGGATGGCCGAGTTAGAGGTTCCGGCA CAGGACTTCCTCCTTGGGGTGCATTTGTAGCTCAACTCCCACCAATGAAGGGTATGTGGA GCGGTGTTTTGGATGGCATGGATGGCAGAATATAGGAATGTCTAGAGCATCATCTCAACC GCAATGTGCTTGCCACCATCGCAGCATTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5IS89 |
Definition |
sp|Q5IS89|LHX1_SAIBB LIM/homeobox protein Lhx1 OS=Saimiri boliviensis boliviensis |
Align length |
44 |
Score (bit) |
34.7 |
E-value |
0.27 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q7X6M7 |
Definition |
tr|Q7X6M7|Q7X6M7_ORYSJ cDNA clone:001-041-H09, full insert sequence OS=Oryza sativa subsp. japonica |
Align length |
151 |
Score (bit) |
200.0 |
E-value |
3.0e-50 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918915|Adiantum capillus-veneris mRNA, clone: YMU001_000119_A02. (509 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q7X6M7|Q7X6M7_ORYSJ cDNA clone:001-041-H09, full insert seque... 200 3e-50 tr|Q7F951|Q7F951_ORYSA OSJNBb0002J11.14 protein (OSIGBa0157A06.4... 200 3e-50 tr|B8ARR1|B8ARR1_ORYSI Putative uncharacterized protein OS=Oryza... 200 3e-50 tr|Q9SVU2|Q9SVU2_ARATH Putative uncharacterized protein F16A16.1... 190 4e-47 tr|Q94AF3|Q94AF3_ARATH AT4g28740/F16A16_150 OS=Arabidopsis thali... 190 4e-47 tr|B4FCK8|B4FCK8_MAIZE Putative uncharacterized protein OS=Zea m... 189 9e-47 tr|A7Q1G1|A7Q1G1_VITVI Chromosome chr7 scaffold_44, whole genome... 188 1e-46 tr|A9S8E7|A9S8E7_PHYPA Predicted protein (Fragment) OS=Physcomit... 182 1e-44 tr|Q0JBW1|Q0JBW1_ORYSJ Os04g0507100 protein (Fragment) OS=Oryza ... 117 3e-25 tr|B7EC55|B7EC55_ORYSJ cDNA clone:J013060A10, full insert sequen... 117 3e-25 tr|Q00TX4|Q00TX4_OSTTA Homology to unknown gene OS=Ostreococcus ... 106 7e-22 tr|B8B4F1|B8B4F1_ORYSI Putative uncharacterized protein OS=Oryza... 103 4e-21 tr|A4S8N6|A4S8N6_OSTLU Predicted protein OS=Ostreococcus lucimar... 96 1e-18 tr|Q0DDB7|Q0DDB7_ORYSJ Os06g0235500 protein (Fragment) OS=Oryza ... 95 2e-18 tr|A8HWL8|A8HWL8_CHLRE Predicted protein OS=Chlamydomonas reinha... 92 1e-17 tr|A8IBH6|A8IBH6_CHLRE Predicted protein OS=Chlamydomonas reinha... 81 3e-14 tr|A7Q095|A7Q095_VITVI Chromosome chr7 scaffold_42, whole genome... 81 3e-14 tr|A5BYD7|A5BYD7_VITVI Putative uncharacterized protein OS=Vitis... 81 3e-14 tr|A1YSB4|A1YSB4_CHLRE Photosystem-II repair protein OS=Chlamydo... 81 3e-14 tr|B4FMU7|B4FMU7_MAIZE Putative uncharacterized protein OS=Zea m... 79 1e-13 tr|A3BA13|A3BA13_ORYSJ Putative uncharacterized protein OS=Oryza... 78 3e-13 tr|A9SDQ5|A9SDQ5_PHYPA Predicted protein OS=Physcomitrella paten... 77 6e-13 tr|A2ZT15|A2ZT15_ORYSJ Putative uncharacterized protein OS=Oryza... 75 2e-12 tr|Q5ZBW3|Q5ZBW3_ORYSJ cDNA clone:001-009-G10, full insert seque... 73 9e-12 tr|B8A7X3|B8A7X3_ORYSI Putative uncharacterized protein OS=Oryza... 73 9e-12 tr|A6N009|A6N009_ORYSI Tpr domain containing protein (Fragment) ... 73 9e-12 tr|B4G0A6|B4G0A6_MAIZE Putative uncharacterized protein OS=Zea m... 69 1e-10 tr|Q9SRY4|Q9SRY4_ARATH F22D16.9 protein OS=Arabidopsis thaliana ... 69 2e-10 tr|A4RV71|A4RV71_OSTLU Predicted protein OS=Ostreococcus lucimar... 54 3e-06 tr|Q01BW5|Q01BW5_OSTTA Chromosome 03 contig 1, DNA sequence. (Fr... 54 6e-06
>tr|Q7X6M7|Q7X6M7_ORYSJ cDNA clone:001-041-H09, full insert sequence OS=Oryza sativa subsp. japonica GN=OSJNBa0043L24.5 PE=2 SV=1 Length = 330
Score = 200 bits (509), Expect = 3e-50 Identities = 94/151 (62%), Positives = 120/151 (79%), Gaps = 1/151 (0%) Frame = +3
Query: 3 LGQLRGIARLVIVVGPASHLEEACRASEPYFLQLVERGVAVISFATDGQVPNLEYSADNE 182 LG+LRG ARLVIV GPA+ + E+ R S+P+ L+ERGV V+ F+TDG P+L++ +E Sbjct: 179 LGELRGTARLVIVAGPAAFVTESFRRSKPFLKDLMERGVLVVPFSTDGNAPDLQFDEADE 238
Query: 183 SKDESEGASVKAEK-LWRGVPIYTTEWTRWLMEQKKLANVPADSPVYLSLRLDGRVRGSG 359 ++E+ A+ K ++ LW+ P+YT+EW +WL EQKKLANV DSPVYLSLRLDGRVRGSG Sbjct: 239 EEEEAAAAAGKMKRRLWQLTPVYTSEWAKWLDEQKKLANVSPDSPVYLSLRLDGRVRGSG 298
Query: 360 TGLPPWGAFVAQLPPMKGMWSGVLDGMDGRI 452 G PPW AFVAQLPP+KGMWSG+LDGMDGR+ Sbjct: 299 VGYPPWQAFVAQLPPVKGMWSGLLDGMDGRV 329
>tr|Q7F951|Q7F951_ORYSA OSJNBb0002J11.14 protein (OSIGBa0157A06.4 protein) OS=Oryza sativa GN=OSJNBb0002J11.14 PE=4 SV=1 Length = 330
Score = 200 bits (509), Expect = 3e-50 Identities = 94/151 (62%), Positives = 120/151 (79%), Gaps = 1/151 (0%) Frame = +3
Query: 3 LGQLRGIARLVIVVGPASHLEEACRASEPYFLQLVERGVAVISFATDGQVPNLEYSADNE 182 LG+LRG ARLVIV GPA+ + E+ R S+P+ L+ERGV V+ F+TDG P+L++ +E Sbjct: 179 LGELRGTARLVIVAGPAAFVTESFRRSKPFLKDLMERGVLVVPFSTDGNAPDLQFDEADE 238
Query: 183 SKDESEGASVKAEK-LWRGVPIYTTEWTRWLMEQKKLANVPADSPVYLSLRLDGRVRGSG 359 ++E+ A+ K ++ LW+ P+YT+EW +WL EQKKLANV DSPVYLSLRLDGRVRGSG Sbjct: 239 EEEEAAAAAGKMKRRLWQLTPVYTSEWAKWLDEQKKLANVSPDSPVYLSLRLDGRVRGSG 298
Query: 360 TGLPPWGAFVAQLPPMKGMWSGVLDGMDGRI 452 G PPW AFVAQLPP+KGMWSG+LDGMDGR+ Sbjct: 299 VGYPPWQAFVAQLPPVKGMWSGLLDGMDGRV 329
>tr|B8ARR1|B8ARR1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_16566 PE=4 SV=1 Length = 805
Score = 200 bits (509), Expect = 3e-50 Identities = 94/151 (62%), Positives = 120/151 (79%), Gaps = 1/151 (0%) Frame = +3
Query: 3 LGQLRGIARLVIVVGPASHLEEACRASEPYFLQLVERGVAVISFATDGQVPNLEYSADNE 182 LG+LRG ARLVIV GPA+ + E+ R S+P+ L+ERGV V+ F+TDG P+L++ +E Sbjct: 654 LGELRGTARLVIVAGPAAFVTESFRRSKPFLKDLMERGVLVVPFSTDGNAPDLQFDEADE 713
Query: 183 SKDESEGASVKAEK-LWRGVPIYTTEWTRWLMEQKKLANVPADSPVYLSLRLDGRVRGSG 359 ++E+ A+ K ++ LW+ P+YT+EW +WL EQKKLANV DSPVYLSLRLDGRVRGSG Sbjct: 714 EEEEAAAAAGKMKRRLWQLTPVYTSEWAKWLDEQKKLANVSPDSPVYLSLRLDGRVRGSG 773
Query: 360 TGLPPWGAFVAQLPPMKGMWSGVLDGMDGRI 452 G PPW AFVAQLPP+KGMWSG+LDGMDGR+ Sbjct: 774 VGYPPWQAFVAQLPPVKGMWSGLLDGMDGRV 804
Score = 197 bits (500), Expect = 3e-49 Identities = 93/150 (62%), Positives = 118/150 (78%), Gaps = 1/150 (0%) Frame = +3
Query: 3 LGQLRGIARLVIVVGPASHLEEACRASEPYFLQLVERGVAVISFATDGQVPNLEYSADNE 182 LG+LRG ARLVIV GPA+ + E+ R S+P+ L+ERGV V+ F+TDG P+L++ +E Sbjct: 347 LGELRGTARLVIVAGPAAFVTESFRRSKPFLKDLMERGVLVVPFSTDGNAPDLQFDEADE 406
Query: 183 SKDESEGASVKAEK-LWRGVPIYTTEWTRWLMEQKKLANVPADSPVYLSLRLDGRVRGSG 359 ++E+ A+ K ++ LW+ P+YT+EW +WL EQKKLANV DSPVYLSLRLD RVRGSG Sbjct: 407 EEEEAAAAAGKMKRRLWQLTPVYTSEWAKWLDEQKKLANVSPDSPVYLSLRLDARVRGSG 466
Query: 360 TGLPPWGAFVAQLPPMKGMWSGVLDGMDGR 449 G PPW AFVAQLPP+KGMWSG+LDGMDGR Sbjct: 467 VGYPPWQAFVAQLPPVKGMWSGLLDGMDGR 496
>tr|Q9SVU2|Q9SVU2_ARATH Putative uncharacterized protein F16A16.150 (Putative uncharacterized protein) (Putative uncharacterized protein AT4g28740) OS=Arabidopsis thaliana GN=F16A16.150 PE=2 SV=1 Length = 331
Score = 190 bits (482), Expect = 4e-47 Identities = 92/150 (61%), Positives = 113/150 (75%) Frame = +3
Query: 3 LGQLRGIARLVIVVGPASHLEEACRASEPYFLQLVERGVAVISFATDGQVPNLEYSADNE 182 +G LRG+ARLVI GPA +EEA + S+ Y LVERGV V+++ATDG P LE+ +E Sbjct: 185 VGDLRGVARLVICAGPAEFIEEAFKRSKEYTQGLVERGVVVVAYATDGNSPVLEF---DE 241
Query: 183 SKDESEGASVKAEKLWRGVPIYTTEWTRWLMEQKKLANVPADSPVYLSLRLDGRVRGSGT 362 + E S + +KLWR P++ EW +WL EQKKLANV +DSPVYLSLRLDGRVR SG Sbjct: 242 TDIADEEMSQRRKKLWRVTPVFVPEWEKWLNEQKKLANVSSDSPVYLSLRLDGRVRASGV 301
Query: 363 GLPPWGAFVAQLPPMKGMWSGVLDGMDGRI 452 G PPW AFVAQLPP+KGMW+G+LDGMDGR+ Sbjct: 302 GYPPWQAFVAQLPPVKGMWTGLLDGMDGRV 331
>tr|Q94AF3|Q94AF3_ARATH AT4g28740/F16A16_150 OS=Arabidopsis thaliana PE=2 SV=1 Length = 347
Score = 190 bits (482), Expect = 4e-47 Identities = 92/150 (61%), Positives = 113/150 (75%) Frame = +3
Query: 3 LGQLRGIARLVIVVGPASHLEEACRASEPYFLQLVERGVAVISFATDGQVPNLEYSADNE 182 +G LRG+ARLVI GPA +EEA + S+ Y LVERGV V+++ATDG P LE+ +E Sbjct: 201 VGDLRGVARLVICAGPAEFIEEAFKRSKEYTQGLVERGVVVVAYATDGNSPVLEF---DE 257
Query: 183 SKDESEGASVKAEKLWRGVPIYTTEWTRWLMEQKKLANVPADSPVYLSLRLDGRVRGSGT 362 + E S + +KLWR P++ EW +WL EQKKLANV +DSPVYLSLRLDGRVR SG Sbjct: 258 TDIADEEMSQRRKKLWRVTPVFVPEWEKWLNEQKKLANVSSDSPVYLSLRLDGRVRASGV 317
Query: 363 GLPPWGAFVAQLPPMKGMWSGVLDGMDGRI 452 G PPW AFVAQLPP+KGMW+G+LDGMDGR+ Sbjct: 318 GYPPWQAFVAQLPPVKGMWTGLLDGMDGRV 347
>tr|B4FCK8|B4FCK8_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 249
Score = 189 bits (479), Expect = 9e-47 Identities = 87/151 (57%), Positives = 112/151 (74%), Gaps = 1/151 (0%) Frame = +3
Query: 3 LGQLRGIARLVIVVGPASHLEEACRASEPYFLQLVERGVAVISFATDGQVPNLEYSADNE 182 LG+LRG RLVIV GPA + E+ R S+P+ +L ER V + FATDG P L + Sbjct: 98 LGELRGTTRLVIVAGPAEFVAESFRRSQPFLRELAERAVLAVPFATDGSTPELRLDDGGD 157
Query: 183 SKDE-SEGASVKAEKLWRGVPIYTTEWTRWLMEQKKLANVPADSPVYLSLRLDGRVRGSG 359 +D + + ++++LW+ P++TTEW +WL +QKKLA VP+DSPVYLSLR+DGRVRGSG Sbjct: 158 DEDGVDDDVARRSKRLWQLTPVFTTEWAQWLDDQKKLAGVPSDSPVYLSLRMDGRVRGSG 217
Query: 360 TGLPPWGAFVAQLPPMKGMWSGVLDGMDGRI 452 G PPW AFVAQLPP+KGMWSG+LDGMDGR+ Sbjct: 218 VGYPPWQAFVAQLPPVKGMWSGLLDGMDGRV 248
>tr|A7Q1G1|A7Q1G1_VITVI Chromosome chr7 scaffold_44, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028450001 PE=4 SV=1 Length = 237
Score = 188 bits (477), Expect = 1e-46 Identities = 87/150 (58%), Positives = 113/150 (75%) Frame = +3
Query: 3 LGQLRGIARLVIVVGPASHLEEACRASEPYFLQLVERGVAVISFATDGQVPNLEYSADNE 182 + LRGIARLVI GPA + E+ + S+P+ L++RGV V+ F TDG++P+ EY E Sbjct: 91 VNDLRGIARLVICAGPAPFIAESFKLSQPFTQGLLDRGVLVVPFVTDGKLPSFEYEESEE 150
Query: 183 SKDESEGASVKAEKLWRGVPIYTTEWTRWLMEQKKLANVPADSPVYLSLRLDGRVRGSGT 362 KD + K ++LW+ VP+Y +EW++WL EQKKLA V +SPVYLSLR+DGRVRGSG Sbjct: 151 MKD----ITTKRKRLWQLVPVYVSEWSKWLDEQKKLAGVSPESPVYLSLRMDGRVRGSGV 206
Query: 363 GLPPWGAFVAQLPPMKGMWSGVLDGMDGRI 452 G PPW AFVAQLPP+KGMW+G+LDGMDGR+ Sbjct: 207 GYPPWNAFVAQLPPIKGMWTGLLDGMDGRV 236
>tr|A9S8E7|A9S8E7_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_125825 PE=4 SV=1 Length = 261
Score = 182 bits (461), Expect = 1e-44 Identities = 87/151 (57%), Positives = 113/151 (74%), Gaps = 1/151 (0%) Frame = +3
Query: 3 LGQLRGIARLVIVVGPASHLEEACRASEPYFLQLVERGVAVISFATDGQVPNLEYSADNE 182 +G+LRG ARLVI+ GP S++EEA + SEPY +L++RGV V ++ATDG +YS+ + Sbjct: 112 IGELRGTARLVILAGPGSYIEEAFKQSEPYKQELLDRGVLVAAYATDG-ASFADYSSVSS 170
Query: 183 SKDESEGASVK-AEKLWRGVPIYTTEWTRWLMEQKKLANVPADSPVYLSLRLDGRVRGSG 359 S + ++ +V EK WR PIYT+EW RW+ +QKKLANVP D PVY+SLRLDGRVRGSG Sbjct: 171 SIESNQSVAVADLEKKWRATPIYTSEWGRWIDDQKKLANVPPDQPVYVSLRLDGRVRGSG 230
Query: 360 TGLPPWGAFVAQLPPMKGMWSGVLDGMDGRI 452 G+P W A QLPP+KG+W GV DGMDGR+ Sbjct: 231 IGIPSWKAMSVQLPPIKGIWGGVFDGMDGRV 261
>tr|Q0JBW1|Q0JBW1_ORYSJ Os04g0507100 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os04g0507100 PE=4 SV=1 Length = 298
Score = 117 bits (293), Expect = 3e-25 Identities = 56/109 (51%), Positives = 80/109 (73%), Gaps = 1/109 (0%) Frame = +3
Query: 3 LGQLRGIARLVIVVGPASHLEEACRASEPYFLQLVERGVAVISFATDGQVPNLEYSADNE 182 LG+LRG ARLVIV GPA+ + E+ R S+P+ L+ERGV V+ F+TDG P+L++ +E Sbjct: 156 LGELRGTARLVIVAGPAAFVTESFRRSKPFLKDLMERGVLVVPFSTDGNAPDLQFDEADE 215
Query: 183 SKDESEGASVKAE-KLWRGVPIYTTEWTRWLMEQKKLANVPADSPVYLS 326 ++E+ A+ K + +LW+ P+YT+EW +WL EQKKLANV DSPV L+ Sbjct: 216 EEEEAAAAAGKMKRRLWQLTPVYTSEWAKWLDEQKKLANVSPDSPVSLA 264
>tr|B7EC55|B7EC55_ORYSJ cDNA clone:J013060A10, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 250
Score = 117 bits (293), Expect = 3e-25 Identities = 56/109 (51%), Positives = 80/109 (73%), Gaps = 1/109 (0%) Frame = +3
Query: 3 LGQLRGIARLVIVVGPASHLEEACRASEPYFLQLVERGVAVISFATDGQVPNLEYSADNE 182 LG+LRG ARLVIV GPA+ + E+ R S+P+ L+ERGV V+ F+TDG P+L++ +E Sbjct: 108 LGELRGTARLVIVAGPAAFVTESFRRSKPFLKDLMERGVLVVPFSTDGNAPDLQFDEADE 167
Query: 183 SKDESEGASVKAE-KLWRGVPIYTTEWTRWLMEQKKLANVPADSPVYLS 326 ++E+ A+ K + +LW+ P+YT+EW +WL EQKKLANV DSPV L+ Sbjct: 168 EEEEAAAAAGKMKRRLWQLTPVYTSEWAKWLDEQKKLANVSPDSPVSLA 216
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