BP918919 |
Clone id |
YMU001_000119_A06 |
Library |
YMU01 |
Length |
291 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000119_A06. |
Accession |
BP918919 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1729Contig1 |
Sequence |
CATGACAAACTCTGCCAGAAAATGCCTTTCTCATGGATTCCGTAATCAGCATACATGCTG TGCTCTTGCCTGCTCCTCCAATACCAAACATACCAAGCACTTTTGTATTTGCAATTCGCT GGGATGGCAGAGCAGCATTGAACTTTGCCTGTAACTCCTTGCAAATACGTTCTCTGCCTT GCACATGCAAGACACTGGACCTTACATCCGATGGCATTGTCTCCATGACTGACTTCAGTA CCCGGTCTCTTAGACCAACGTCTCCTTCTCCTTGCTGTCTGGAGATGCTAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P47804 |
Definition |
sp|P47804|RGR_HUMAN RPE-retinal G protein-coupled receptor OS=Homo sapiens |
Align length |
46 |
Score (bit) |
32.0 |
E-value |
0.97 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TDN3 |
Definition |
tr|A9TDN3|A9TDN3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
83 |
Score (bit) |
63.2 |
E-value |
6.0e-09 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918919|Adiantum capillus-veneris mRNA, clone: YMU001_000119_A06. (291 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TDN3|A9TDN3_PHYPA Predicted protein OS=Physcomitrella paten... 63 6e-09 tr|A9RG57|A9RG57_PHYPA Predicted protein OS=Physcomitrella paten... 45 0.002 tr|A9TC59|A9TC59_PHYPA Predicted protein OS=Physcomitrella paten... 43 0.007 tr|A9T1I0|A9T1I0_PHYPA Predicted protein OS=Physcomitrella paten... 40 0.076 tr|A9SQC0|A9SQC0_PHYPA Predicted protein OS=Physcomitrella paten... 39 0.099 tr|B5XW96|B5XW96_KLEP3 SIS domain protein OS=Klebsiella pneumoni... 39 0.17 tr|A6TAA7|A6TAA7_KLEP7 Putative transcriptional regulator OS=Kle... 39 0.17 tr|B4UB13|B4UB13_ANASK Curli production assembly/transport compo... 37 0.38 tr|B8JAW6|B8JAW6_9DELT Curli production assembly/transport compo... 37 0.38 tr|Q2IMY7|Q2IMY7_ANADE Curli production assembly/transport compo... 37 0.49 tr|A7QN76|A7QN76_VITVI Chromosome undetermined scaffold_131, who... 36 0.84 tr|A7PQA2|A7PQA2_VITVI Chromosome chr18 scaffold_24, whole genom... 36 1.1 tr|A7PQA5|A7PQA5_VITVI Chromosome chr18 scaffold_24, whole genom... 35 1.4 tr|A1W696|A1W696_ACISJ Helicase domain protein OS=Acidovorax sp.... 35 1.9 tr|Q018Q6|Q018Q6_OSTTA Putative male sterility 1 protein (ISS) O... 35 1.9 tr|A7PQ41|A7PQ41_VITVI Chromosome chr18 scaffold_24, whole genom... 35 1.9 tr|A5B905|A5B905_VITVI Putative uncharacterized protein OS=Vitis... 35 1.9 tr|B0DEI1|B0DEI1_LACBS Predicted protein OS=Laccaria bicolor (st... 35 1.9 tr|A5N7P8|A5N7P8_CLOK5 Predicted ABC transporter, ATPase compone... 35 2.4 tr|A7QX72|A7QX72_VITVI Chromosome chr6 scaffold_214, whole genom... 35 2.4 tr|A5BMZ0|A5BMZ0_VITVI Putative uncharacterized protein OS=Vitis... 35 2.4 tr|A6F8B3|A6F8B3_9GAMM Hypothetical NosF protein OS=Moritella sp... 34 4.2 tr|A7QDC4|A7QDC4_VITVI Chromosome undetermined scaffold_80, whol... 34 4.2 tr|Q2M0K1|Q2M0K1_DROPS GA19446 OS=Drosophila pseudoobscura pseud... 34 4.2 tr|Q0CGD7|Q0CGD7_ASPTN Putative uncharacterized protein OS=Asper... 34 4.2 tr|A7PWL9|A7PWL9_VITVI Chromosome chr19 scaffold_35, whole genom... 33 5.4 tr|B4PES8|B4PES8_DROYA GE19693 OS=Drosophila yakuba GN=GE19693 P... 33 5.4 tr|B4IUH1|B4IUH1_DROYA GE23239 (Fragment) OS=Drosophila yakuba G... 33 5.4 tr|B0D197|B0D197_LACBS Predicted protein OS=Laccaria bicolor (st... 33 5.4 tr|Q8VVQ6|Q8VVQ6_STAAU ORF46 OS=Staphylococcus aureus PE=3 SV=1 33 7.1
>tr|A9TDN3|A9TDN3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_169462 PE=4 SV=1 Length = 1173
Score = 63.2 bits (152), Expect = 6e-09 Identities = 32/83 (38%), Positives = 47/83 (56%) Frame = -3
Query: 250 RDRVLKSVMETMPSDVRSSVLHVQGRERICKELQAKFNAALPSQRIANTKVLGMFGIGGA 71 RD V+ + + +P DV VQGR RIC+ + KF S R +V+G++G GG Sbjct: 251 RDVVVSYLCDLVPPDVWWDDSDVQGRLRICRRILGKFEKTCESLR-NGVRVVGLYGTGGI 309
Query: 70 GKSTACMLITESMRKAFSGRVCH 2 GK+T C ++ + K F G+VCH Sbjct: 310 GKTTFCKVLCNELDKKFHGKVCH 332
>tr|A9RG57|A9RG57_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_65683 PE=4 SV=1 Length = 983
Score = 44.7 bits (104), Expect = 0.002 Identities = 30/95 (31%), Positives = 42/95 (44%) Frame = -3
Query: 286 ISRQQGEGDVGLRDRVLKSVMETMPSDVRSSVLHVQGRERICKELQAKFNAALPSQRIAN 107 IS +V R ++K + P V + +G ERICK L F A Sbjct: 197 ISLPADGSEVSYRRDIVKKIWYLCPPHVPYDLDEKEGWERICKVLSGLFVAD------EG 250
Query: 106 TKVLGMFGIGGAGKSTACMLITESMRKAFSGRVCH 2 + LG++G+GG GK+T C + F GRV H Sbjct: 251 VEKLGIYGMGGLGKTTICKGMCNYFHGHFFGRVFH 285
>tr|A9TC59|A9TC59_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_169270 PE=4 SV=1 Length = 1083
Score = 43.1 bits (100), Expect = 0.007 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 3/61 (4%) Frame = -3
Query: 175 RERICKE---LQAKFNAALPSQRIANTKVLGMFGIGGAGKSTACMLITESMRKAFSGRVC 5 R R C+ + AK PS+R +V+G++G GG GK+T C + + + F G+VC Sbjct: 254 RWRSCQNSMRILAKVEKTCPSRRDGG-RVVGLYGAGGIGKTTFCKELLDELETKFHGKVC 312
Query: 4 H 2 H Sbjct: 313 H 313
>tr|A9T1I0|A9T1I0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_167552 PE=4 SV=1 Length = 1042
Score = 39.7 bits (91), Expect = 0.076 Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 19/108 (17%) Frame = -3
Query: 277 QQGEGDVGLRDRVLKSVMETMPSDVRSSVLHVQGRE-------------------RICKE 155 +QGEGD R++V +++ + V ++ GR+ R + Sbjct: 228 EQGEGDSSYRNKVAEALRRSR------EVANLSGRKDAKMSLFTTLLCLRNAFACRDQRR 281
Query: 154 LQAKFNAALPSQRIANTKVLGMFGIGGAGKSTACMLITESMRKAFSGR 11 + AK PS+R +V+G++G GG GK+T C + + + F G+ Sbjct: 282 ILAKVEKTCPSRRYGG-RVVGLYGAGGIGKTTFCKELLDELETKFHGK 328
>tr|A9SQC0|A9SQC0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_166149 PE=4 SV=1 Length = 1269
Score = 39.3 bits (90), Expect = 0.099 Identities = 16/42 (38%), Positives = 27/42 (64%) Frame = -3
Query: 265 GDVGLRDRVLKSVMETMPSDVRSSVLHVQGRERICKELQAKF 140 G+V R+ ++K++ + +P + R HVQGR R+CK L +F Sbjct: 260 GEVKFREEIVKAICKWVPPETRREDSHVQGRSRLCKALCNEF 301
>tr|B5XW96|B5XW96_KLEP3 SIS domain protein OS=Klebsiella pneumoniae (strain 342) GN=KPK_2224 PE=4 SV=1 Length = 300
Score = 38.5 bits (88), Expect = 0.17 Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 4/61 (6%) Frame = -3
Query: 238 LKSVMETMPSDVRSSVLHV-QGRERICKELQAKFNAALPSQRIA---NTKVLGMFGIGGA 71 ++S + + SDV SS+ V +G +R+C+ L N A +Q +A + + +G+FGIG + Sbjct: 96 MRSTVTALSSDVNSSIDFVLEGHQRVCEVLSRADNRAAVAQAVALLSDARQVGIFGIGAS 155
Query: 70 G 68 G Sbjct: 156 G 156
>tr|A6TAA7|A6TAA7_KLEP7 Putative transcriptional regulator OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=KPN78578_20670 PE=4 SV=1 Length = 300
Score = 38.5 bits (88), Expect = 0.17 Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 4/61 (6%) Frame = -3
Query: 238 LKSVMETMPSDVRSSVLHV-QGRERICKELQAKFNAALPSQRIA---NTKVLGMFGIGGA 71 ++S + + SDV SS+ V +G +R+C+ L N A +Q +A + + +G+FGIG + Sbjct: 96 MRSTVTALSSDVNSSIDFVLEGHQRVCEVLSRADNRAAVAQAVALLSDARQVGIFGIGAS 155
Query: 70 G 68 G Sbjct: 156 G 156
>tr|B4UB13|B4UB13_ANASK Curli production assembly/transport component CsgG OS=Anaeromyxobacter sp. (strain K) GN=AnaeK_0419 PE=3 SV=1 Length = 321
Score = 37.4 bits (85), Expect = 0.38 Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 32/116 (27%) Frame = -3
Query: 274 QGEGDVGLRDRVLKS----VMETMPSDV-----RSSVLHVQGRE---------------- 170 + E D L DR + + V++ + S + RS +L VQGR+ Sbjct: 194 RAEYDATLNDRAIAAAISDVIDRLVSTLAARPWRSDILEVQGRQVFISGGRHQGVREGDV 253
Query: 169 -------RICKELQAKFNAALPSQRIANTKVLGMFGIGGAGKSTACMLITESMRKA 23 K Q F ALP +R+ KVL +FG G + C + + ++ KA Sbjct: 254 LAVMEAGNTVKSRQTGFEVALPPKRVGTIKVLSLFGDGETSEGAVCEVTSGAIEKA 309
>tr|B8JAW6|B8JAW6_9DELT Curli production assembly/transport component CsgG OS=Anaeromyxobacter dehalogenans 2CP-1 GN=A2cp1_0420 PE=3 SV=1 Length = 321
Score = 37.4 bits (85), Expect = 0.38 Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 32/116 (27%) Frame = -3
Query: 274 QGEGDVGLRDRVLKS----VMETMPSDV-----RSSVLHVQGRE---------------- 170 + E D L DR + + V++ + S + RS +L VQGR+ Sbjct: 194 RAEYDATLNDRAIAAAISDVIDRLVSTLAARPWRSDILEVQGRQVFISGGRHQGVREGDV 253
Query: 169 -------RICKELQAKFNAALPSQRIANTKVLGMFGIGGAGKSTACMLITESMRKA 23 K Q F ALP +R+ KVL +FG G + C + + ++ KA Sbjct: 254 LAVMEAGNTVKSRQTGFEVALPPKRVGTIKVLSLFGDGETSEGAVCEVTSGTIEKA 309
>tr|Q2IMY7|Q2IMY7_ANADE Curli production assembly/transport component CsgG OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=Adeh_0391 PE=3 SV=1 Length = 320
Score = 37.0 bits (84), Expect = 0.49 Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 32/116 (27%) Frame = -3
Query: 274 QGEGDVGLRDRVLKSVMETMPSDV---------RSSVLHVQGRERIC------------- 161 + E D L DR + + + + + RS +L VQGR+ Sbjct: 193 RAEYDATLNDRAIAAAISDVIDRLVATLAARPWRSDILEVQGRQVFISGGRHQGVREGDL 252
Query: 160 ----------KELQAKFNAALPSQRIANTKVLGMFGIGGAGKSTACMLITESMRKA 23 K Q F ALP +R+ KVL +FG G + C L + ++ KA Sbjct: 253 LAVMEAGNKVKSRQTGFEVALPPKRVGTLKVLSLFGDGETSEGAVCELTSGTIEKA 308
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