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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918932
Clone id YMU001_000119_B12
Library
Length 455
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000119_B12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TGGAAGAATTCGCGGCCGCAGGAATTTTTGTGTATGTCCTTCTTTTTTGAGAAAGTAAAA
CTTGGTATTGAGAAGCGAACTTTTTGGCACTGTATAAACGGGCAAAGGGTCAAGGGAGCG
ACAAAGCCAACATTAAGACATGTTTCTATACGTGGTTTTGCTGGATTTACAGTGATGACA
GTCTATGATGTTTTACTTGCAAATTCAGCATGTCCCCCATATTCCATTACCTTTGGAATG
AACGCTTCTATATATGGCAGTGTTTTTTTGAAGGAGAACCCCACCCTGGCGACGCAGCAA
AAAGAAATTGACGTTTGTTTACCTGTCTGGAACTGAGAATGATCTTGAGTATCGACTGGT
CGCCAGCATGGCTTTCTTCCATTTTATGCATGGTTTCACATGCTTCAAAATGCATGTAAA
AATCCCTCAATTGCTGTCCCTCGAGTCCTTTCGTC
■■Homology search results ■■ -
sp_hit_id A7I3Z5
Definition sp|A7I3Z5|PPK_CAMHC Polyphosphate kinase OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A)
Align length 38
Score (bit) 31.2
E-value 1.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918932|Adiantum capillus-veneris mRNA, clone:
YMU001_000119_B12.
         (426 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A7I3Z5|PPK_CAMHC Polyphosphate kinase OS=Campylobacter homini...    31   1.8  
sp|P58544|BTBD1_MOUSE BTB/POZ domain-containing protein 1 OS=Mus...    31   1.8  
sp|Q8IYF3|TEX11_HUMAN Testis-expressed sequence 11 protein OS=Ho...    30   3.0  
sp|Q9H0C5|BTBD1_HUMAN BTB/POZ domain-containing protein 1 OS=Hom...    30   5.2  
sp|Q5HT53|PPK_CAMJR Polyphosphate kinase OS=Campylobacter jejuni...    29   6.8  
sp|A1W0X7|PPK_CAMJJ Polyphosphate kinase OS=Campylobacter jejuni...    29   6.8  
sp|Q9PMU0|PPK_CAMJE Polyphosphate kinase OS=Campylobacter jejuni...    29   6.8  
sp|A7H220|PPK_CAMJD Polyphosphate kinase OS=Campylobacter jejuni...    29   6.8  
sp|A8FN39|PPK_CAMJ8 Polyphosphate kinase OS=Campylobacter jejuni...    29   6.8  
sp|O32350|PPK_CAMCO Polyphosphate kinase OS=Campylobacter coli G...    29   6.8  
sp|Q9CD52|KSGA_MYCLE Dimethyladenosine transferase OS=Mycobacter...    29   8.8  

>sp|A7I3Z5|PPK_CAMHC Polyphosphate kinase OS=Campylobacter hominis
           (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A)
           GN=ppk PE=3 SV=1
          Length = 696

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +3

Query: 306 ENDLEYRLVASMAFFHFMHGFTCFKMHVKIPQLLSLES 419
           EN+L +      A  H ++G T FK+H KI Q++  ++
Sbjct: 401 ENNLHWAKALEQAGAHVIYGITGFKVHAKITQIIKKDA 438


>sp|P58544|BTBD1_MOUSE BTB/POZ domain-containing protein 1 OS=Mus
           musculus GN=Btbd1 PE=2 SV=2
          Length = 488

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = -2

Query: 380 FEACETMHKMEESHAGDQSILKIILSSRQVNKRQFLFAASPG 255
           + AC T+ K  +SH G + + K++  +   +K  FLF +SPG
Sbjct: 429 YTACATL-KGPDSHYGTKGLKKVVHETPAASKTVFLFFSSPG 469


>sp|Q8IYF3|TEX11_HUMAN Testis-expressed sequence 11 protein OS=Homo
           sapiens GN=TEX11 PE=1 SV=3
          Length = 940

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 14/43 (32%), Positives = 27/43 (62%)
 Frame = -2

Query: 413 EGQQLRDFYMHFEACETMHKMEESHAGDQSILKIILSSRQVNK 285
           E Q++R   +H+ AC+ +   E S A +QSI ++I+ + ++ K
Sbjct: 91  EEQKIR---LHYVACKLLSMCEASFASEQSIQRLIMMNMRIGK 130


>sp|Q9H0C5|BTBD1_HUMAN BTB/POZ domain-containing protein 1 OS=Homo
           sapiens GN=BTBD1 PE=1 SV=1
          Length = 482

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = -2

Query: 380 FEACETMHKMEESHAGDQSILKIILSSRQVNKRQFLFAASPG 255
           + AC T+ K  +SH G + + K++  +   +K  F F +SPG
Sbjct: 423 YTACATL-KGPDSHYGTKGLKKVVHETPAASKTVFFFFSSPG 463


>sp|Q5HT53|PPK_CAMJR Polyphosphate kinase OS=Campylobacter jejuni
           (strain RM1221) GN=ppk PE=3 SV=1
          Length = 694

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 306 ENDLEYRLVASMAFFHFMHGFTCFKMHVKIPQLL 407
           EN+L +      A  H ++G T FK+H K+ Q++
Sbjct: 401 ENNLHWAKALENAGAHVIYGITGFKVHAKVSQVI 434


>sp|A1W0X7|PPK_CAMJJ Polyphosphate kinase OS=Campylobacter jejuni
           subsp. jejuni serotype O:23/36 (strain 81-176) GN=ppk
           PE=3 SV=1
          Length = 694

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 306 ENDLEYRLVASMAFFHFMHGFTCFKMHVKIPQLL 407
           EN+L +      A  H ++G T FK+H K+ Q++
Sbjct: 401 ENNLHWAKALENAGAHVIYGITGFKVHAKVSQVI 434


>sp|Q9PMU0|PPK_CAMJE Polyphosphate kinase OS=Campylobacter jejuni
           GN=ppk PE=3 SV=1
          Length = 694

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 306 ENDLEYRLVASMAFFHFMHGFTCFKMHVKIPQLL 407
           EN+L +      A  H ++G T FK+H K+ Q++
Sbjct: 401 ENNLHWAKALENAGAHVIYGITGFKVHAKVSQVI 434


>sp|A7H220|PPK_CAMJD Polyphosphate kinase OS=Campylobacter jejuni
           subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97)
           GN=ppk PE=3 SV=1
          Length = 694

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 306 ENDLEYRLVASMAFFHFMHGFTCFKMHVKIPQLL 407
           EN+L +      A  H ++G T FK+H K+ Q++
Sbjct: 401 ENNLHWAKALENAGAHVIYGITGFKVHAKVSQVI 434


>sp|A8FN39|PPK_CAMJ8 Polyphosphate kinase OS=Campylobacter jejuni
           subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828)
           GN=ppk PE=3 SV=1
          Length = 694

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 306 ENDLEYRLVASMAFFHFMHGFTCFKMHVKIPQLL 407
           EN+L +      A  H ++G T FK+H K+ Q++
Sbjct: 401 ENNLHWAKALENAGAHVIYGITGFKVHAKVSQVI 434


>sp|O32350|PPK_CAMCO Polyphosphate kinase OS=Campylobacter coli
           GN=ppk PE=3 SV=1
          Length = 694

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 306 ENDLEYRLVASMAFFHFMHGFTCFKMHVKIPQLL 407
           EN+L +      A  H ++G T FK+H K+ Q++
Sbjct: 401 ENNLHWAKALENAGAHVIYGITGFKVHAKVSQVI 434
tr_hit_id B7GRD4
Definition tr|B7GRD4|B7GRD4_BIFLO Putative uncharacterized protein OS=Bifidobacterium longum subsp. infantis ATCC 15697
Align length 34
Score (bit) 34.3
E-value 3.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918932|Adiantum capillus-veneris mRNA, clone:
YMU001_000119_B12.
         (426 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B7GRD4|B7GRD4_BIFLO Putative uncharacterized protein OS=Bifid...    34   3.2  
tr|Q8X8X2|Q8X8X2_ECO57 Putative uncharacterized protein (Putativ...    33   7.0  
tr|B5YSP5|B5YSP5_ECO5E Putative uncharacterized protein OS=Esche...    33   7.0  
tr|B7A3T7|B7A3T7_ECO57 Putative uncharacterized protein OS=Esche...    33   7.0  
tr|B3IRN7|B3IRN7_ECOLX Putative uncharacterized protein OS=Esche...    33   7.0  
tr|B3C344|B3C344_ECO57 Putative uncharacterized protein OS=Esche...    33   7.0  
tr|B3BMP9|B3BMP9_ECO57 Putative uncharacterized protein OS=Esche...    33   7.0  
tr|B3B7B5|B3B7B5_ECO57 Putative uncharacterized protein OS=Esche...    33   7.0  
tr|B3AS44|B3AS44_ECO57 Putative uncharacterized protein OS=Esche...    33   7.0  
tr|B3AC61|B3AC61_ECO57 Putative uncharacterized protein OS=Esche...    33   7.0  
tr|B2PTE5|B2PTE5_ECO57 Putative uncharacterized protein OS=Esche...    33   7.0  
tr|B2PC75|B2PC75_ECO57 Putative uncharacterized protein OS=Esche...    33   7.0  
tr|B2NY48|B2NY48_ECO57 Putative uncharacterized protein OS=Esche...    33   7.0  
tr|Q7SEX8|Q7SEX8_NEUCR Putative uncharacterized protein OS=Neuro...    33   7.0  

>tr|B7GRD4|B7GRD4_BIFLO Putative uncharacterized protein
           OS=Bifidobacterium longum subsp. infantis ATCC 15697
           GN=Blon_1276 PE=4 SV=1
          Length = 336

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -1

Query: 351 GRKPCWRPVDTQDHSQFQTGKQTSISFCCVARVG 250
           GR  CWRP DT  H  ++ G  T   F  + R+G
Sbjct: 88  GRSECWRPSDTNTHPVWEEGGGTHAWFHAIHRIG 121


>tr|Q8X8X2|Q8X8X2_ECO57 Putative uncharacterized protein (Putative
           uncharacterized protein ECs2759) OS=Escherichia coli
           O157:H7 GN=ECs2759 PE=4 SV=1
          Length = 118

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
 Frame = +2

Query: 65  INGQRVKGATKPTLRHVSIR--GFAGFTVMTVYDVLLANSACPPYSITFGMNASIYGSVF 238
           +  +R+K A    L H+S+   G AG   M +YD +  +    PY+    + A   G   
Sbjct: 32  VENERLKHAMAVALEHISVTDAGQAGVAAMIIYDAMYHSEKTDPYAFLAELRAQ--GVEM 89

Query: 239 LKENPTL 259
           ++E+P +
Sbjct: 90  VREHPAI 96


>tr|B5YSP5|B5YSP5_ECO5E Putative uncharacterized protein
           OS=Escherichia coli O157:H7 (strain EC4115 / EHEC)
           GN=ECH74115_2805 PE=4 SV=1
          Length = 118

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
 Frame = +2

Query: 65  INGQRVKGATKPTLRHVSIR--GFAGFTVMTVYDVLLANSACPPYSITFGMNASIYGSVF 238
           +  +R+K A    L H+S+   G AG   M +YD +  +    PY+    + A   G   
Sbjct: 32  VENERLKHAMAVALEHISVTDAGQAGVAAMIIYDAMYHSEKTDPYAFLAELRAQ--GVEM 89

Query: 239 LKENPTL 259
           ++E+P +
Sbjct: 90  VREHPAI 96


>tr|B7A3T7|B7A3T7_ECO57 Putative uncharacterized protein
           OS=Escherichia coli O157:H7 str. TW14588
           GN=ESCCO14588_4295 PE=4 SV=1
          Length = 118

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
 Frame = +2

Query: 65  INGQRVKGATKPTLRHVSIR--GFAGFTVMTVYDVLLANSACPPYSITFGMNASIYGSVF 238
           +  +R+K A    L H+S+   G AG   M +YD +  +    PY+    + A   G   
Sbjct: 32  VENERLKHAMAVALEHISVTDAGQAGVAAMIIYDAMYHSEKTDPYAFLAELRAQ--GVEM 89

Query: 239 LKENPTL 259
           ++E+P +
Sbjct: 90  VREHPAI 96


>tr|B3IRN7|B3IRN7_ECOLX Putative uncharacterized protein
           OS=Escherichia coli E110019 GN=EcE110019_4391 PE=4 SV=1
          Length = 118

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
 Frame = +2

Query: 65  INGQRVKGATKPTLRHVSIR--GFAGFTVMTVYDVLLANSACPPYSITFGMNASIYGSVF 238
           +  +R+K A    L H+S+   G AG   M +YD +  +    PY+    + A   G   
Sbjct: 32  VENERLKHAMAVALEHISVTDAGQAGVAAMIIYDAMYHSEKTDPYAFLAELRAQ--GVEM 89

Query: 239 LKENPTL 259
           ++E+P +
Sbjct: 90  VREHPAI 96


>tr|B3C344|B3C344_ECO57 Putative uncharacterized protein
           OS=Escherichia coli O157:H7 str. EC508 GN=ECH7EC508_0571
           PE=4 SV=1
          Length = 118

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
 Frame = +2

Query: 65  INGQRVKGATKPTLRHVSIR--GFAGFTVMTVYDVLLANSACPPYSITFGMNASIYGSVF 238
           +  +R+K A    L H+S+   G AG   M +YD +  +    PY+    + A   G   
Sbjct: 32  VENERLKHAMAVALEHISVTDAGQAGVAAMIIYDAMYHSEKTDPYAFLAELRAQ--GVEM 89

Query: 239 LKENPTL 259
           ++E+P +
Sbjct: 90  VREHPAI 96


>tr|B3BMP9|B3BMP9_ECO57 Putative uncharacterized protein
           OS=Escherichia coli O157:H7 str. EC869 GN=ECH7EC869_3445
           PE=4 SV=1
          Length = 118

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
 Frame = +2

Query: 65  INGQRVKGATKPTLRHVSIR--GFAGFTVMTVYDVLLANSACPPYSITFGMNASIYGSVF 238
           +  +R+K A    L H+S+   G AG   M +YD +  +    PY+    + A   G   
Sbjct: 32  VENERLKHAMAVALEHISVTDAGQAGVAAMIIYDAMYHSEKTDPYAFLAELRAQ--GVEM 89

Query: 239 LKENPTL 259
           ++E+P +
Sbjct: 90  VREHPAI 96


>tr|B3B7B5|B3B7B5_ECO57 Putative uncharacterized protein
           OS=Escherichia coli O157:H7 str. EC4501
           GN=ECH7EC4501_3321 PE=4 SV=1
          Length = 118

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
 Frame = +2

Query: 65  INGQRVKGATKPTLRHVSIR--GFAGFTVMTVYDVLLANSACPPYSITFGMNASIYGSVF 238
           +  +R+K A    L H+S+   G AG   M +YD +  +    PY+    + A   G   
Sbjct: 32  VENERLKHAMAVALEHISVTDAGQAGVAAMIIYDAMYHSEKTDPYAFLAELRAQ--GVEM 89

Query: 239 LKENPTL 259
           ++E+P +
Sbjct: 90  VREHPAI 96


>tr|B3AS44|B3AS44_ECO57 Putative uncharacterized protein
           OS=Escherichia coli O157:H7 str. EC4486
           GN=ECH7EC4486_2864 PE=4 SV=1
          Length = 118

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
 Frame = +2

Query: 65  INGQRVKGATKPTLRHVSIR--GFAGFTVMTVYDVLLANSACPPYSITFGMNASIYGSVF 238
           +  +R+K A    L H+S+   G AG   M +YD +  +    PY+    + A   G   
Sbjct: 32  VENERLKHAMAVALEHISVTDAGQAGVAAMIIYDAMYHSEKTDPYAFLAELRAQ--GVEM 89

Query: 239 LKENPTL 259
           ++E+P +
Sbjct: 90  VREHPAI 96


>tr|B3AC61|B3AC61_ECO57 Putative uncharacterized protein
           OS=Escherichia coli O157:H7 str. EC4401
           GN=ECH7EC4401_1967 PE=4 SV=1
          Length = 118

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
 Frame = +2

Query: 65  INGQRVKGATKPTLRHVSIR--GFAGFTVMTVYDVLLANSACPPYSITFGMNASIYGSVF 238
           +  +R+K A    L H+S+   G AG   M +YD +  +    PY+    + A   G   
Sbjct: 32  VENERLKHAMAVALEHISVTDAGQAGVAAMIIYDAMYHSEKTDPYAFLAELRAQ--GVEM 89

Query: 239 LKENPTL 259
           ++E+P +
Sbjct: 90  VREHPAI 96