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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918935
Clone id YMU001_000119_C03
Library
Length 528
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000119_C03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GTGTCGACTAGACCACCATTCCTATCACTTGCCTCGTGTCACTGCCTAGGCGAGAGTCTG
TCCAGTGTGAACTCTTGACCAACTGTGACCAACTGAACTAACTGTCTGTCCTGCACCAGT
GACATTGTAGCCCTGCTACAATTAAAAAAGAAATACATGTTCACATTATCTTTTGGGTAT
TGTGGACCCTCACAACTTAGGATGCATCCGGTATTCCACATTAGCTGTCCTTAAAGATAC
ACAATGCCTTCCATGTGAGTCTTCTCAAACCATTCAAGGGAGATCTACCTATTGAACCAT
CAAATGATGCTCAGCTAGAAGTTGAAGGTACTGAAGAGATTTTAATTCCAAAATATATTA
ATGCTCGCAAGGATAGAACCACAAGAGGAAAGACCTTTTAGTGAAATTCAAGAACGACCT
GTCCATGGATGTACAGTGGATGAACTCTGAGGATTTGATGGATCATGATGATCTGATACA
GTCGTACAAAGATGCATTTGCATTTTGTAAATATAGATTTGACATGTT
■■Homology search results ■■ -
sp_hit_id A3CK79
Definition sp|A3CK79|RL6_STRSV 50S ribosomal protein L6 OS=Streptococcus sanguinis (strain SK36)
Align length 55
Score (bit) 29.6
E-value 9.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918935|Adiantum capillus-veneris mRNA, clone:
YMU001_000119_C03.
         (528 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A3CK79|RL6_STRSV 50S ribosomal protein L6 OS=Streptococcus sa...    30   9.2  

>sp|A3CK79|RL6_STRSV 50S ribosomal protein L6 OS=Streptococcus
           sanguinis (strain SK36) GN=rplF PE=3 SV=1
          Length = 178

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 18/55 (32%), Positives = 33/55 (60%)
 Frame = +3

Query: 231 LKIHNAFHVSLLKPFKGDLPIEPSNDAQLEVEGTEEILIPKYINARKDRTTRGKT 395
           ++I N  +V  +K  KG+L  E S D ++ VEGT E+ + +  ++++ +T  G T
Sbjct: 15  VEISNKDNVVTVKGPKGELTREFSKDIEIRVEGT-EVTLHRPNDSKEMKTIHGTT 68
tr_hit_id A6QSH7
Definition tr|A6QSH7|A6QSH7_AJECN Putative uncharacterized protein OS=Ajellomyces capsulata (strain NAm1 / WU24)
Align length 44
Score (bit) 36.2
E-value 0.15
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918935|Adiantum capillus-veneris mRNA, clone:
YMU001_000119_C03.
         (528 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A6QSH7|A6QSH7_AJECN Putative uncharacterized protein OS=Ajell...    36   0.15 
tr|A6QZD3|A6QZD3_AJECN Putative uncharacterized protein OS=Ajell...    36   0.16 
tr|A6XPD6|A6XPD6_AJECN Putative uncharacterized protein (Fragmen...    36   0.16 
tr|A6QX29|A6QX29_AJECN Putative uncharacterized protein OS=Ajell...    35   0.32 
tr|A6QSW9|A6QSW9_AJECN Putative uncharacterized protein OS=Ajell...    35   0.32 
tr|A6R248|A6R248_AJECN Putative uncharacterized protein OS=Ajell...    35   0.32 
tr|A6RCX9|A6RCX9_AJECN Putative uncharacterized protein OS=Ajell...    35   0.32 
tr|A6R397|A6R397_AJECN Putative uncharacterized protein OS=Ajell...    35   0.32 
tr|A6QVQ3|A6QVQ3_AJECN Putative uncharacterized protein OS=Ajell...    35   0.32 
tr|A6R5Q2|A6R5Q2_AJECN Putative uncharacterized protein OS=Ajell...    35   0.33 
tr|A8NP93|A8NP93_COPC7 Putative uncharacterized protein OS=Copri...    32   0.42 
tr|A5AP28|A5AP28_VITVI Putative uncharacterized protein OS=Vitis...    26   0.45 
tr|Q5AXL4|Q5AXL4_EMENI Putative uncharacterized protein OS=Emeri...    37   0.80 
tr|Q0ZBM6|Q0ZBM6_9CHLO Putative uncharacterized protein OS=Dunal...    36   1.0  
tr|Q5BBQ2|Q5BBQ2_EMENI Putative uncharacterized protein OS=Emeri...    36   1.0  
tr|Q5B9W0|Q5B9W0_EMENI Putative uncharacterized protein OS=Emeri...    36   1.0  
tr|Q5B9V9|Q5B9V9_EMENI Putative uncharacterized protein OS=Emeri...    36   1.0  
tr|Q5B7H9|Q5B7H9_EMENI Putative uncharacterized protein OS=Emeri...    36   1.0  
tr|Q5B2I8|Q5B2I8_EMENI Putative uncharacterized protein OS=Emeri...    36   1.0  
tr|Q5B2I3|Q5B2I3_EMENI Putative uncharacterized protein OS=Emeri...    36   1.0  
tr|Q5AV49|Q5AV49_EMENI Putative uncharacterized protein OS=Emeri...    36   1.0  
tr|Q5AV34|Q5AV34_EMENI Putative uncharacterized protein OS=Emeri...    36   1.0  
tr|Q84UZ2|Q84UZ2_CHLRE Putative chromo-protein OS=Chlamydomonas ...    31   1.6  
tr|Q6RYC6|Q6RYC6_ASPFL Gag-pol polyprotein OS=Aspergillus flavus...    30   1.9  
tr|Q84ZV5|Q84ZV5_SOYBN Polyprotein OS=Glycine max PE=4 SV=1            28   2.4  
tr|Q2UPL3|Q2UPL3_ASPOR Transposon-encoded proteins with TYA OS=A...    31   2.5  
tr|Q9ZVK3|Q9ZVK3_ARATH Putative retroelement pol polyprotein OS=...    30   2.5  
tr|Q5B1V9|Q5B1V9_EMENI Putative uncharacterized protein OS=Emeri...    35   3.0  
tr|B6NV00|B6NV00_BRAFL Putative uncharacterized protein (Fragmen...    34   4.0  
tr|Q5ATS5|Q5ATS5_EMENI Putative uncharacterized protein OS=Emeri...    34   4.0  

>tr|A6QSH7|A6QSH7_AJECN Putative uncharacterized protein
            OS=Ajellomyces capsulata (strain NAm1 / WU24)
            GN=HCAG_00333 PE=4 SV=1
          Length = 1517

 Score = 36.2 bits (82), Expect(2) = 0.15
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +3

Query: 237  IHNAFHVSLLKPFKGDLPIEPSNDAQLEVEGTEEILIPKYINAR 368
            IH  FH+S L+P+K     EP     LE+EG  E L+   ++ R
Sbjct: 1421 IHPVFHISYLEPYKQRPGAEPPRPDGLEIEGNTEYLVEGILDKR 1464



 Score = 21.6 bits (44), Expect(2) = 0.15
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 145  KKKYMFTLSFGYCGPSQLRMHPVFHIS 225
            K+ Y   L+ G+       +HPVFHIS
Sbjct: 1407 KQAYELKLTSGFKS-----IHPVFHIS 1428


>tr|A6QZD3|A6QZD3_AJECN Putative uncharacterized protein
           OS=Ajellomyces capsulata (strain NAm1 / WU24)
           GN=HCAG_02740 PE=4 SV=1
          Length = 700

 Score = 36.2 bits (82), Expect(2) = 0.16
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +3

Query: 237 IHNAFHVSLLKPFKGDLPIEPSNDAQLEVEGTEEILIPKYINAR 368
           IH  FH+S L+P+K     EP     LE+EG  E L+   ++ R
Sbjct: 604 IHPVFHISYLEPYKQRPGAEPPRPDGLEIEGNTEYLVEGILDKR 647



 Score = 21.6 bits (44), Expect(2) = 0.16
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 145 KKKYMFTLSFGYCGPSQLRMHPVFHIS 225
           K+ Y   L+ G+       +HPVFHIS
Sbjct: 590 KQAYELKLTSGFKS-----IHPVFHIS 611


>tr|A6XPD6|A6XPD6_AJECN Putative uncharacterized protein (Fragment)
           OS=Ajellomyces capsulata (strain NAm1 / WU24)
           GN=HCAG_09237 PE=4 SV=1
          Length = 664

 Score = 36.2 bits (82), Expect(2) = 0.16
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +3

Query: 237 IHNAFHVSLLKPFKGDLPIEPSNDAQLEVEGTEEILIPKYINAR 368
           IH  FH+S L+P+K     EP     LE+EG  E L+   ++ R
Sbjct: 570 IHPVFHISYLEPYKQRPGAEPPRPDGLEIEGNTEYLVEGILDKR 613



 Score = 21.6 bits (44), Expect(2) = 0.16
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 145 KKKYMFTLSFGYCGPSQLRMHPVFHIS 225
           K+ Y   L+ G+       +HPVFHIS
Sbjct: 556 KQAYELKLTSGFKS-----IHPVFHIS 577


>tr|A6QX29|A6QX29_AJECN Putative uncharacterized protein
            OS=Ajellomyces capsulata (strain NAm1 / WU24)
            GN=HCAG_01936 PE=4 SV=1
          Length = 1520

 Score = 35.0 bits (79), Expect(2) = 0.32
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +3

Query: 237  IHNAFHVSLLKPFKGDLPIEPSNDAQLEVEGTEEILIPKYINAR 368
            IH  FH+S L+P+K     EP     +E+EG  E L+   ++ R
Sbjct: 1424 IHPVFHISYLEPYKQRPGAEPPRPDGVEIEGNTEYLVEGILDKR 1467



 Score = 21.6 bits (44), Expect(2) = 0.32
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 145  KKKYMFTLSFGYCGPSQLRMHPVFHIS 225
            K+ Y   L+ G+       +HPVFHIS
Sbjct: 1410 KQAYELKLTSGFKS-----IHPVFHIS 1431


>tr|A6QSW9|A6QSW9_AJECN Putative uncharacterized protein
            OS=Ajellomyces capsulata (strain NAm1 / WU24)
            GN=HCAG_00475 PE=4 SV=1
          Length = 1520

 Score = 35.0 bits (79), Expect(2) = 0.32
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +3

Query: 237  IHNAFHVSLLKPFKGDLPIEPSNDAQLEVEGTEEILIPKYINAR 368
            IH  FH+S L+P+K     EP     +E+EG  E L+   ++ R
Sbjct: 1424 IHPVFHISYLEPYKQRPGAEPPRPDGVEIEGNTEYLVEGILDKR 1467



 Score = 21.6 bits (44), Expect(2) = 0.32
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 145  KKKYMFTLSFGYCGPSQLRMHPVFHIS 225
            K+ Y   L+ G+       +HPVFHIS
Sbjct: 1410 KQAYELKLTSGFKS-----IHPVFHIS 1431


>tr|A6R248|A6R248_AJECN Putative uncharacterized protein
            OS=Ajellomyces capsulata (strain NAm1 / WU24)
            GN=HCAG_03706 PE=4 SV=1
          Length = 1508

 Score = 35.0 bits (79), Expect(2) = 0.32
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +3

Query: 237  IHNAFHVSLLKPFKGDLPIEPSNDAQLEVEGTEEILIPKYINAR 368
            IH  FH+S L+P+K     EP     +E+EG  E L+   ++ R
Sbjct: 1412 IHPVFHISYLEPYKQRPGAEPPRPDGVEIEGNTEYLVEGILDKR 1455



 Score = 21.6 bits (44), Expect(2) = 0.32
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 145  KKKYMFTLSFGYCGPSQLRMHPVFHIS 225
            K+ Y   L+ G+       +HPVFHIS
Sbjct: 1398 KQAYELKLTSGFKS-----IHPVFHIS 1419


>tr|A6RCX9|A6RCX9_AJECN Putative uncharacterized protein
            OS=Ajellomyces capsulata (strain NAm1 / WU24)
            GN=HCAG_07487 PE=4 SV=1
          Length = 1499

 Score = 35.0 bits (79), Expect(2) = 0.32
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +3

Query: 237  IHNAFHVSLLKPFKGDLPIEPSNDAQLEVEGTEEILIPKYINAR 368
            IH  FH+S L+P+K     EP     +E+EG  E L+   ++ R
Sbjct: 1403 IHPVFHISYLEPYKQRPGAEPPRPDGVEIEGNTEYLVEGILDKR 1446



 Score = 21.6 bits (44), Expect(2) = 0.32
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 145  KKKYMFTLSFGYCGPSQLRMHPVFHIS 225
            K+ Y   L+ G+       +HPVFHIS
Sbjct: 1389 KQAYELKLTSGFKS-----IHPVFHIS 1410


>tr|A6R397|A6R397_AJECN Putative uncharacterized protein
            OS=Ajellomyces capsulata (strain NAm1 / WU24)
            GN=HCAG_04105 PE=4 SV=1
          Length = 1481

 Score = 35.0 bits (79), Expect(2) = 0.32
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +3

Query: 237  IHNAFHVSLLKPFKGDLPIEPSNDAQLEVEGTEEILIPKYINAR 368
            IH  FH+S L+P+K     EP     +E+EG  E L+   ++ R
Sbjct: 1385 IHPVFHISYLEPYKQRPGAEPPRPDGVEIEGNTEYLVEGILDKR 1428



 Score = 21.6 bits (44), Expect(2) = 0.32
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 145  KKKYMFTLSFGYCGPSQLRMHPVFHIS 225
            K+ Y   L+ G+       +HPVFHIS
Sbjct: 1371 KQAYELKLTSGFKS-----IHPVFHIS 1392


>tr|A6QVQ3|A6QVQ3_AJECN Putative uncharacterized protein
            OS=Ajellomyces capsulata (strain NAm1 / WU24)
            GN=HCAG_01460 PE=4 SV=1
          Length = 1414

 Score = 35.0 bits (79), Expect(2) = 0.32
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +3

Query: 237  IHNAFHVSLLKPFKGDLPIEPSNDAQLEVEGTEEILIPKYINAR 368
            IH  FH+S L+P+K     EP     +E+EG  E L+   ++ R
Sbjct: 1318 IHPVFHISYLEPYKQRPGAEPPRPDGVEIEGNTEYLVEGILDKR 1361



 Score = 21.6 bits (44), Expect(2) = 0.32
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 145  KKKYMFTLSFGYCGPSQLRMHPVFHIS 225
            K+ Y   L+ G+       +HPVFHIS
Sbjct: 1304 KQAYELKLTSGFKS-----IHPVFHIS 1325


>tr|A6R5Q2|A6R5Q2_AJECN Putative uncharacterized protein
            OS=Ajellomyces capsulata (strain NAm1 / WU24)
            GN=HCAG_04960 PE=4 SV=1
          Length = 1074

 Score = 35.0 bits (79), Expect(2) = 0.33
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +3

Query: 237  IHNAFHVSLLKPFKGDLPIEPSNDAQLEVEGTEEILIPKYINAR 368
            IH  FH+S L+P+K     EP     +E+EG  E L+   ++ R
Sbjct: 978  IHPVFHISYLEPYKQRPGAEPPRPDGVEIEGNTEYLVEGILDKR 1021



 Score = 21.6 bits (44), Expect(2) = 0.33
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 145  KKKYMFTLSFGYCGPSQLRMHPVFHIS 225
            K+ Y   L+ G+       +HPVFHIS
Sbjct: 964  KQAYELKLTSGFKS-----IHPVFHIS 985