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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918940
Clone id YMU001_000119_C08
Library
Length 537
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000119_C08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GTTCCAGCCACTTCCATTTGAGGTAAAAAAGACAACTGATGAATAAAAGTTCTTAAAATC
ATGAATGAACGTTGGCCCTACACAAGTAACGTGCCTCCCACATATCACAATATACTAAAA
ACAGCAAGCCAAATATAAATCAGCATCACAATAAAACCAAAAGACCAATCAAAAAACCTG
AGTCCAATGACAAAGGATGATCCTGGGCTGACTGATTATTCTCTTCTTCCTCTTCCTCCA
GATCCCGCTCCATATCATCTGCATCCATATCCACCTCAATTATATCCTGAGCATTCAGGT
CATCAGCTCGAAATAAAGACTGCACACAAGGCTCAAGCATTTTCATGAGCAAAACTGCTG
ATTTGGTGCTGAATCAGAAAAAGTAGGGTCATAATCTACAATCATACCGACACGTCCATC
TTCAAATAAAGTGAAGGTGTTGATTCCCAACGTTCTTTCATAGACTGTATTTGTTGTTCT
GTGAAATTATGAACATTCCTTGCAGCACAACCCTTCACATCACTGTAAGGAGCTTCA
■■Homology search results ■■ -
sp_hit_id Q9R0I7
Definition sp|Q9R0I7|YLPM1_MOUSE YLP motif-containing protein 1 OS=Mus musculus
Align length 38
Score (bit) 32.7
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918940|Adiantum capillus-veneris mRNA, clone:
YMU001_000119_C08.
         (537 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9R0I7|YLPM1_MOUSE YLP motif-containing protein 1 OS=Mus musc...    33   1.1  
sp|P49750|YLPM1_HUMAN YLP motif-containing protein 1 OS=Homo sap...    33   1.1  
sp|A8FHE3|NHAK_BACP2 Sodium, potassium, lithium and rubidium/H(+...    32   1.5  
sp|Q04545|YMI1_YEAST Zinc finger protein YML081W OS=Saccharomyce...    30   7.5  
sp|Q057N6|AROA_BUCCC 3-phosphoshikimate 1-carboxyvinyltransferas...    30   7.5  
sp|Q3V2Q8|N42L1_MOUSE NEDD4-binding protein 2-like 1 OS=Mus musc...    30   9.7  

>sp|Q9R0I7|YLPM1_MOUSE YLP motif-containing protein 1 OS=Mus musculus
            GN=Ylpm1 PE=2 SV=1
          Length = 1386

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -2

Query: 524  SDVKGCAARNVHNFTEQQIQSMKERWESTPSLYLKMDV 411
            +D + C  RN+H    ++I  M E WE  P   +++D+
Sbjct: 1202 ADNQTCGKRNIHGRKLKEINKMAEHWEVAPRHMMRLDI 1239


>sp|P49750|YLPM1_HUMAN YLP motif-containing protein 1 OS=Homo sapiens
            GN=YLPM1 PE=1 SV=3
          Length = 1951

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = -2

Query: 524  SDVKGCAARNVHNFTEQQIQSMKERWESTPSLYLKMDV 411
            +D + C  RN+H    ++I  M + WE+ P   +++D+
Sbjct: 1767 ADNQTCGKRNIHGRKLKEINKMADHWETAPRHMMRLDI 1804


>sp|A8FHE3|NHAK_BACP2 Sodium, potassium, lithium and rubidium/H(+)
           antiporter OS=Bacillus pumilus (strain SAFR-032) GN=nhaK
           PE=3 SV=1
          Length = 671

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 13/39 (33%), Positives = 25/39 (64%)
 Frame = -1

Query: 315 YFELMT*MLRI*LRWIWMQMIWSGIWRKRKKRIISQPRI 199
           Y  ++T  L I LR++W+ + W+G W   KK+ + +P++
Sbjct: 314 YILIITLCLMI-LRFLWVWLFWAGKWSATKKQNVKKPKL 351


>sp|Q04545|YMI1_YEAST Zinc finger protein YML081W OS=Saccharomyces
            cerevisiae GN=YML081W PE=1 SV=1
          Length = 1251

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
 Frame = -1

Query: 237  RKRKKRIISQPRIILCHWTQVF*LVFWFYCDADLYLACCF*YIVI-CGRHVTCVGPTFIH 61
            R  K  I++Q RI +CH   +   +F    D D    CCF  I + CG  V C       
Sbjct: 830  RNFKYFILAQSRIRICHIVLLISNLFKSLVDFD----CCFHSIDLKCG--VPC------- 876

Query: 60   DFKNFYSSVVFFTSNGSGWN 1
                 Y+ V+FF  N   WN
Sbjct: 877  -----YNEVLFFCENSRTWN 891


>sp|Q057N6|AROA_BUCCC 3-phosphoshikimate 1-carboxyvinyltransferase
           OS=Buchnera aphidicola subsp. Cinara cedri GN=aroA PE=3
           SV=1
          Length = 435

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 5/39 (12%)
 Frame = -1

Query: 141 DLYLACCF*YIVICGRHVT-----CVGPTFIHDFKNFYS 40
           D  +A CF  I + G  VT     CV  TF   FKNFYS
Sbjct: 386 DHRIAMCFSLISLSGTSVTLLNPKCVNKTFPSFFKNFYS 424


>sp|Q3V2Q8|N42L1_MOUSE NEDD4-binding protein 2-like 1 OS=Mus
           musculus GN=N4bp2l1 PE=2 SV=1
          Length = 238

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -2

Query: 521 DVKGCAARNVHNFTEQQIQSMKERWE 444
           +V+  A RN+H   +++IQ MKER+E
Sbjct: 150 NVQELARRNIHGVPKEKIQRMKERYE 175
tr_hit_id Q9FM17
Definition tr|Q9FM17|Q9FM17_ARATH Similarity to nuclear protein ZAP OS=Arabidopsis thaliana
Align length 42
Score (bit) 59.3
E-value 1.0e-07
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918940|Adiantum capillus-veneris mRNA, clone:
YMU001_000119_C08.
         (537 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9FM17|Q9FM17_ARATH Similarity to nuclear protein ZAP OS=Arab...    59   1e-07
tr|B8AE71|B8AE71_ORYSI Putative uncharacterized protein OS=Oryza...    59   2e-07
tr|A7QI55|A7QI55_VITVI Chromosome chr17 scaffold_101, whole geno...    59   2e-07
tr|Q6H899|Q6H899_ORYSJ Nuclear protein ZAP-like OS=Oryza sativa ...    57   8e-07
tr|Q0E2T9|Q0E2T9_ORYSJ Os02g0215000 protein OS=Oryza sativa subs...    57   8e-07
tr|A5AIN8|A5AIN8_VITVI Putative uncharacterized protein OS=Vitis...    52   2e-05
tr|B4JJQ5|B4JJQ5_DROGR GH12526 OS=Drosophila grimshawi GN=GH1252...    42   0.020
tr|Q29FV7|Q29FV7_DROPS GA17072 OS=Drosophila pseudoobscura pseud...    40   0.059
tr|B4GWP9|B4GWP9_DROPE GL16589 OS=Drosophila persimilis GN=GL165...    40   0.059
tr|B4M2S0|B4M2S0_DROVI GJ19544 OS=Drosophila virilis GN=GJ19544 ...    40   0.076
tr|B4L8C9|B4L8C9_DROMO GI11179 OS=Drosophila mojavensis GN=GI111...    40   0.076
tr|B4PXF3|B4PXF3_DROYA GE15418 OS=Drosophila yakuba GN=GE15418 P...    40   0.100
tr|B3NW66|B3NW66_DROER GG18946 OS=Drosophila erecta GN=GG18946 P...    40   0.100
tr|B4R7I8|B4R7I8_DROSI GD16041 OS=Drosophila simulans GN=GD16041...    39   0.17 
tr|B4IDL9|B4IDL9_DROSE GM11337 OS=Drosophila sechellia GN=GM1133...    39   0.17 
tr|A3A4I8|A3A4I8_ORYSJ Putative uncharacterized protein OS=Oryza...    38   0.29 
tr|B4NCC2|B4NCC2_DROWI GK25108 OS=Drosophila willistoni GN=GK251...    38   0.38 
tr|Q380B9|Q380B9_ANOGA AGAP001168-PA (Fragment) OS=Anopheles gam...    37   0.85 
tr|B3MZC2|B3MZC2_DROAN GF19153 OS=Drosophila ananassae GN=GF1915...    36   1.4  
tr|Q9W2Y5|Q9W2Y5_DROME CG32685 OS=Drosophila melanogaster GN=CG3...    35   2.5  
tr|B3RKY5|B3RKY5_TRIAD Putative uncharacterized protein OS=Trich...    35   2.5  
tr|B6PAM3|B6PAM3_BRAFL Putative uncharacterized protein (Fragmen...    35   3.2  
tr|B6M7Z4|B6M7Z4_BRAFL Putative uncharacterized protein (Fragmen...    35   3.2  
tr|Q5RGA8|Q5RGA8_DANRE Novel protein similar to vertebrate YLP m...    34   5.5  
tr|Q4RR45|Q4RR45_TETNG Chromosome 14 SCAF15003, whole genome sho...    34   5.5  
tr|Q0SBE8|Q0SBE8_RHOSR Probable nitrilase OS=Rhodococcus sp. (st...    33   9.5  

>tr|Q9FM17|Q9FM17_ARATH Similarity to nuclear protein ZAP
           OS=Arabidopsis thaliana PE=4 SV=1
          Length = 644

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 24/42 (57%), Positives = 30/42 (71%)
 Frame = -2

Query: 536 EAPYSDVKGCAARNVHNFTEQQIQSMKERWESTPSLYLKMDV 411
           EA Y D  GCAARNVH  T  Q+Q M E+WE  PSLY+++D+
Sbjct: 408 EATYKDPTGCAARNVHGITVDQVQQMAEQWEEAPSLYMQLDI 449


>tr|B8AE71|B8AE71_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_06368 PE=4 SV=1
          Length = 446

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 24/42 (57%), Positives = 28/42 (66%)
 Frame = -2

Query: 536 EAPYSDVKGCAARNVHNFTEQQIQSMKERWESTPSLYLKMDV 411
           EAPY D  GCAARNVH FT   +  M   WE  PSLYL++D+
Sbjct: 199 EAPYKDPTGCAARNVHGFTVDDVNKMAADWEEAPSLYLRLDI 240


>tr|A7QI55|A7QI55_VITVI Chromosome chr17 scaffold_101, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00000100001
           PE=4 SV=1
          Length = 517

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 24/42 (57%), Positives = 30/42 (71%)
 Frame = -2

Query: 536 EAPYSDVKGCAARNVHNFTEQQIQSMKERWESTPSLYLKMDV 411
           EA Y D  GCAARNVH FT+  IQ M  +WE  PS+YL++D+
Sbjct: 272 EASYKDPAGCAARNVHGFTQDDIQRMAGQWEEAPSMYLQLDI 313


>tr|Q6H899|Q6H899_ORYSJ Nuclear protein ZAP-like OS=Oryza sativa
           subsp. japonica GN=OJ1006_D05.28 PE=4 SV=1
          Length = 753

 Score = 56.6 bits (135), Expect = 8e-07
 Identities = 23/42 (54%), Positives = 27/42 (64%)
 Frame = -2

Query: 536 EAPYSDVKGCAARNVHNFTEQQIQSMKERWESTPSLYLKMDV 411
           EAPY D  GCAARNVH FT   +  M   WE  P LYL++D+
Sbjct: 509 EAPYKDPTGCAARNVHGFTVDDVNKMAADWEEAPPLYLRLDI 550


>tr|Q0E2T9|Q0E2T9_ORYSJ Os02g0215000 protein OS=Oryza sativa subsp.
           japonica GN=Os02g0215000 PE=4 SV=1
          Length = 734

 Score = 56.6 bits (135), Expect = 8e-07
 Identities = 23/42 (54%), Positives = 27/42 (64%)
 Frame = -2

Query: 536 EAPYSDVKGCAARNVHNFTEQQIQSMKERWESTPSLYLKMDV 411
           EAPY D  GCAARNVH FT   +  M   WE  P LYL++D+
Sbjct: 490 EAPYKDPTGCAARNVHGFTVDDVNKMAADWEEAPPLYLRLDI 531


>tr|A5AIN8|A5AIN8_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_021242 PE=4 SV=1
          Length = 242

 Score = 52.0 bits (123), Expect = 2e-05
 Identities = 20/35 (57%), Positives = 27/35 (77%)
 Frame = -2

Query: 515 KGCAARNVHNFTEQQIQSMKERWESTPSLYLKMDV 411
           +GCAARNVH FT+  IQ M  +WE  PS+YL++D+
Sbjct: 4   QGCAARNVHGFTQDDIQRMAGQWEEAPSMYLQLDI 38


>tr|B4JJQ5|B4JJQ5_DROGR GH12526 OS=Drosophila grimshawi GN=GH12526
            PE=4 SV=1
          Length = 1907

 Score = 42.0 bits (97), Expect = 0.020
 Identities = 17/40 (42%), Positives = 27/40 (67%)
 Frame = -2

Query: 527  YSDVKGCAARNVHNFTEQQIQSMKERWESTPSLYLKMDVS 408
            + DV+ C  RN+H  +E+ I+ + E W +TP  Y+K+DVS
Sbjct: 1701 HCDVETCLGRNIHQRSEEDIRFVLENWCTTPLHYIKLDVS 1740


>tr|Q29FV7|Q29FV7_DROPS GA17072 OS=Drosophila pseudoobscura
            pseudoobscura GN=GA17072 PE=4 SV=2
          Length = 2168

 Score = 40.4 bits (93), Expect = 0.059
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = -2

Query: 521  DVKGCAARNVHNFTEQQIQSMKERWESTPSLYLKMDVS 408
            DV+ C  RN H  T ++IQ   + W  TP  Y+K+DV+
Sbjct: 1941 DVETCLGRNAHKRTTEEIQLALDNWNETPLQYIKLDVA 1978


>tr|B4GWP9|B4GWP9_DROPE GL16589 OS=Drosophila persimilis GN=GL16589
            PE=4 SV=1
          Length = 1448

 Score = 40.4 bits (93), Expect = 0.059
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = -2

Query: 521  DVKGCAARNVHNFTEQQIQSMKERWESTPSLYLKMDVS 408
            DV+ C  RN H  T ++IQ   + W  TP  Y+K+DV+
Sbjct: 1221 DVETCLGRNAHQRTTEEIQLALDNWNETPLQYIKLDVA 1258


>tr|B4M2S0|B4M2S0_DROVI GJ19544 OS=Drosophila virilis GN=GJ19544 PE=4
            SV=1
          Length = 1890

 Score = 40.0 bits (92), Expect = 0.076
 Identities = 16/40 (40%), Positives = 27/40 (67%)
 Frame = -2

Query: 527  YSDVKGCAARNVHNFTEQQIQSMKERWESTPSLYLKMDVS 408
            + DV+ C  RN H  +E+ I+++ + W +TP  Y+K+DVS
Sbjct: 1689 HCDVETCLGRNSHQRSEEDIRAVLDNWCTTPLHYIKLDVS 1728