BP918943
Clone id YMU001_000119_C11
Library
Length 227
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000119_C11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GTCCATCAAAGGGAAGGTGTGTGTACTGGGAAGCCATGTCACCAGTTTGTGACACTTGAG
CAGTTCCTAAGTTCTTGCTTTAAGCGCAGGCTGGAGCTGCTTGTTTTTCTCTTGTTCGGT
TTTCAAAGTACTAAAGTTGTTCAAGTCCTGCAGATTTTGGTAGTTCGCTATCTTTCCATC
CAATCGCTCGCCAGAAGAGGTTATATATTGGCAGTACATGGCAACCT
■■Homology search results ■■ -
sp_hit_id Q9U7D5
Definition sp|Q9U7D5|ACM3_CAEEL Muscarinic acetylcholine receptor gar-3 OS=Caenorhabditis elegans
Align length 53
Score (bit) 30.0
E-value 3.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918943|Adiantum capillus-veneris mRNA, clone:
YMU001_000119_C11.
(227 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9U7D5|ACM3_CAEEL Muscarinic acetylcholine receptor gar-3 OS=... 30 3.8

>sp|Q9U7D5|ACM3_CAEEL Muscarinic acetylcholine receptor gar-3
OS=Caenorhabditis elegans GN=gar-3 PE=1 SV=2
Length = 611

Score = 30.0 bits (66), Expect = 3.8
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Frame = -3

Query: 174 KIANYQNLQDLNNFSTLKT----EQEKNKQLQPALKART*ELLKCHKLVTWLP 28
K + ++N + L NFS+ + EQ KN++ Q + A+T + C + TW P
Sbjct: 487 KQSPFKNGRILKNFSSQERKSEKEQRKNERKQESKAAKTLSAILCAFIATWTP 539


tr_hit_id Q0W0W8
Definition tr|Q0W0W8|Q0W0W8_UNCMA Putative tungsten-containing aldehyde:ferredoxin oxidoreductase OS=Uncultured methanogenic archaeon RC-I
Align length 51
Score (bit) 33.5
E-value 5.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918943|Adiantum capillus-veneris mRNA, clone:
YMU001_000119_C11.
(227 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q0W0W8|Q0W0W8_UNCMA Putative tungsten-containing aldehyde:fer... 33 5.5

>tr|Q0W0W8|Q0W0W8_UNCMA Putative tungsten-containing
aldehyde:ferredoxin oxidoreductase OS=Uncultured
methanogenic archaeon RC-I GN=aor-2 PE=4 SV=1
Length = 634

Score = 33.5 bits (75), Expect = 5.5
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = -2

Query: 220 HVLPIYNLFWRAIGWKDSELP-----KSAGLEQL*YFENRTREKQAAPACA 83
H+ P+ + ++ A GW S +P +S GLE + NR RE+ APA A
Sbjct: 584 HLDPMLDAYYEARGWDRSGIPTMEKLRSLGLEHVSRDLNRAREEAGAPATA 634