BP918951
Clone id YMU001_000119_D09
Library
Length 349
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000119_D09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GGCAGGAATACTGAAGATAGTAGAGATAATGAAATCAAATCGAAGCAGAGAAAAGTTAAG
AGGAAGCTTATCAAAGAGGAGGTGTAGGGGTACTCAGCATGTGCAGAGGTCCTTTGAGTG
GCATCTATGGGCCATTCAGCAAGGTTTCTTGATCTCGGCCACTCCTATTCCTCTGGGTTT
TAGAAATTGGGGAAGTTTTGTGGGTTGATGGACATGAACCTACGTGAGGGTGGAGAAGAG
GGGGTTCAAGAGTAAGCAGAAGCGGGTGGCTTGGAGATATTGGTCTGTAGCAGTAAATGA
GGAGGTAGTCCTCCCCACTCCCTTAGCTGTTAGAGTAGGTGGTTGACCT
■■Homology search results ■■ -
sp_hit_id P31563
Definition sp|P31563|YCF1_OENBE Putative membrane protein ycf1 (Fragment) OS=Oenothera bertiana
Align length 21
Score (bit) 30.8
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918951|Adiantum capillus-veneris mRNA, clone:
YMU001_000119_D09.
(349 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P31563|YCF1_OENBE Putative membrane protein ycf1 (Fragment) O... 31 2.2

>sp|P31563|YCF1_OENBE Putative membrane protein ycf1 (Fragment)
OS=Oenothera bertiana GN=ycf1 PE=3 SV=1
Length = 1005

Score = 30.8 bits (68), Expect = 2.2
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +1

Query: 4 RNTEDSRDNEIKSKQRKVKRK 66
+N S+ NEIKSKQ+KVKRK
Sbjct: 812 QNEIKSKQNEIKSKQKKVKRK 832


tr_hit_id A7QVS9
Definition tr|A7QVS9|A7QVS9_VITVI Chromosome chr7 scaffold_192, whole genome shotgun sequence OS=Vitis vinifera
Align length 63
Score (bit) 33.1
E-value 7.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918951|Adiantum capillus-veneris mRNA, clone:
YMU001_000119_D09.
(349 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7QVS9|A7QVS9_VITVI Chromosome chr7 scaffold_192, whole genom... 33 7.0

>tr|A7QVS9|A7QVS9_VITVI Chromosome chr7 scaffold_192, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00007505001
PE=4 SV=1
Length = 347

Score = 33.1 bits (74), Expect = 7.0
Identities = 16/63 (25%), Positives = 26/63 (41%)
Frame = +2

Query: 17 IVEIMKSNRSREKLRGSLSKRRCRGTQHVQRSFEWHLWAIQQGFLISATPIPLGFRNWGS 196
++ I ++N +GS+ V W +W I Q F + P PL W +
Sbjct: 178 LIHIGRNNMHENWTKGSILT--------VASCITWSIWYIMQAFTMKRYPAPLSITTWMN 229

Query: 197 FVG 205
F+G
Sbjct: 230 FIG 232