BP918963 |
Clone id |
YMU001_000119_E09 |
Library |
YMU01 |
Length |
538 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000119_E09. |
Accession |
BP918963 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GATCCATTACTTTCAGTAATCGTACTTTCCAACCGTATTGTGTATGGAAAAACTTCCTCA GAGGGCAAAGCATATTCCAATGCTTTTTCAGCGAGCACTCCATGACCGATCTCTCTTCGA CTGGGTGCTCCGACTCGTCCAGCCTCACCCACTGAAGAGGGTGGAAAGCTGTACTGAAAG TAGAACCTTTTAGTGTCCGTATCAGTCAGATTGTCCAGCCTTTGACCCATATCATCACCG CCCAATGTAGTAACTGCCAAAGCCTGTGTTTCTCCCCGTGTGAACAGTGCACTTCCATGT GCACGTGGCAGCAAACTGCATGAGCATTGGATAGGGCGAATTTCTGCTAGTCCCCGACCA TCACTTCTCTTCCTATTCTTTATAACTAAAGATCGCATTATCTTTGAATTAATCTGCTTG AAAGCCACCTTTACATCCAAGGGGTCAAAATACTCACTTAGTCGTTTCTGCAACACAGGC TTTACATGAAGATCCCCTTCATCAACCTCTCCATCTTCCAGACCAAGCTGCTCGTGAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q255L4 |
Definition |
sp|Q255L4|PNP_CHLFF Polyribonucleotide nucleotidyltransferase OS=Chlamydophila felis (strain Fe/C-56) |
Align length |
152 |
Score (bit) |
186.0 |
E-value |
5.0e-47 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q69LE7 |
Definition |
tr|Q69LE7|Q69LE7_ORYSJ Os07g0168000 protein OS=Oryza sativa subsp. japonica |
Align length |
172 |
Score (bit) |
234.0 |
E-value |
2.0e-60 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918963|Adiantum capillus-veneris mRNA, clone: YMU001_000119_E09. (538 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q69LE7|Q69LE7_ORYSJ Os07g0168000 protein OS=Oryza sativa subs... 234 2e-60 tr|A3BGY2|A3BGY2_ORYSJ Putative uncharacterized protein OS=Oryza... 234 2e-60 tr|A2YIJ3|A2YIJ3_ORYSI Putative uncharacterized protein OS=Oryza... 234 2e-60 tr|O24288|O24288_PEA Polynucleotide phosphorylase OS=Pisum sativ... 230 3e-59 tr|Q9S749|Q9S749_ARATH Putative polynucleotide phosphorylase OS=... 229 7e-59 tr|Q9M497|Q9M497_ARATH Putative polynucleotide phosphorylase (Fr... 229 7e-59 tr|Q8GZQ3|Q8GZQ3_ARATH Polynucleotide phosphorylase OS=Arabidops... 229 7e-59 tr|A7QRH7|A7QRH7_VITVI Chromosome chr8 scaffold_150, whole genom... 228 1e-58 tr|Q41370|Q41370_SPIOL Polyribonucleotide phophorylase (Fragment... 222 1e-56 tr|Q1G2Y1|Q1G2Y1_CHLRE Chloroplast polyribonucleotide phosphoryl... 176 5e-43 tr|B0BAV0|B0BAV0_CHLTB Polyribonucleotide nucleotidyltransferase... 175 2e-42 tr|B0B971|B0B971_CHLT2 Polyribonucleotide nucleotidyltransferase... 175 2e-42 tr|B6BRI0|B6BRI0_9RICK Polyribonucleotide nucleotidyltransferase... 171 3e-41 tr|A6E575|A6E575_9RHOB Polynucleotide phosphorylase/polyadenylas... 167 4e-40 tr|Q1V1F0|Q1V1F0_9RICK Polyribonucleotide nucleotidyltransferase... 166 9e-40 tr|Q01D77|Q01D77_OSTTA Putative polynucleotide phosphorylase (IS... 164 2e-39 tr|Q7P6G3|Q7P6G3_FUSNV Polyribonucleotide nucleotidyltransferase... 164 3e-39 tr|Q0FL01|Q0FL01_9RHOB Polyribonucleotide nucleotidyltransferase... 164 3e-39 tr|A5TVI5|A5TVI5_FUSNP Polyribonucleotide nucleotidyltransferase... 164 3e-39 tr|A8RBD9|A8RBD9_9FIRM Putative uncharacterized protein OS=Eubac... 163 5e-39 tr|A3VCI4|A3VCI4_9RHOB Polyribonucleotide nucleotidyltransferase... 162 8e-39 tr|B7G0I4|B7G0I4_PHATR Predicted protein OS=Phaeodactylum tricor... 162 1e-38 tr|B4S5G5|B4S5G5_PROA2 Polyribonucleotide nucleotidyltransferase... 162 1e-38 tr|A3W4Z8|A3W4Z8_9RHOB Polyribonucleotide nucleotidyltransferase... 162 1e-38 tr|A3VQS4|A3VQS4_9PROT Pnp, polyribonucleotide nucleotidyltransf... 162 1e-38 tr|B8C1C5|B8C1C5_THAPS Polyribonucleotide nucleotidyltransferase... 162 1e-38 tr|B3QM09|B3QM09_CHLP8 Polyribonucleotide nucleotidyltransferase... 161 2e-38 tr|B3EMN6|B3EMN6_CHLPB Polyribonucleotide nucleotidyltransferase... 161 2e-38 tr|A4RTW2|A4RTW2_OSTLU Predicted protein OS=Ostreococcus lucimar... 161 2e-38 tr|Q2CAG2|Q2CAG2_9RHOB Polyribonucleotide nucleotidyltransferase... 160 3e-38
>tr|Q69LE7|Q69LE7_ORYSJ Os07g0168000 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0050F10.4 PE=4 SV=1 Length = 902
Score = 234 bits (597), Expect = 2e-60 Identities = 114/172 (66%), Positives = 138/172 (80%), Gaps = 1/172 (0%) Frame = -3
Query: 515 DGEVDEGDLHVKPVLQKRLSEYFDPLDVKVAFKQINSKIMRSLVIKNRKRSDGRGLAEIR 336 DGEVDEG++H+KPV +K + F +DVK+ FK+++SK +R +++ KRSDGR E+R Sbjct: 399 DGEVDEGEVHIKPVSRKPPRQLFSEVDVKLVFKEVSSKFLRRRIVEGGKRSDGRSPCELR 458
Query: 335 PIQCSCSLLPRAHGSALFTRGETQALAVTTLGGDDMGQRLDNLTDT-DTKRFYFQYSFPP 159 PI C LLPRAHGSALFTRGETQALAV TLG M QR+DNL DT ++K FY QY+FPP Sbjct: 459 PINSQCGLLPRAHGSALFTRGETQALAVVTLGDYQMAQRIDNLVDTEESKSFYLQYTFPP 518
Query: 158 SSVGEAGRVGAPSRREIGHGVLAEKALEYALPSEEVFPYTIRLESTITESNG 3 SSVGE GR+GAP+RREIGHG+LAE+ALE LP EE FPYTIR+ESTITESNG Sbjct: 519 SSVGEVGRIGAPNRREIGHGMLAERALEPILPPEEDFPYTIRVESTITESNG 570
>tr|A3BGY2|A3BGY2_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_022304 PE=4 SV=1 Length = 778
Score = 234 bits (597), Expect = 2e-60 Identities = 114/172 (66%), Positives = 138/172 (80%), Gaps = 1/172 (0%) Frame = -3
Query: 515 DGEVDEGDLHVKPVLQKRLSEYFDPLDVKVAFKQINSKIMRSLVIKNRKRSDGRGLAEIR 336 DGEVDEG++H+KPV +K + F +DVK+ FK+++SK +R +++ KRSDGR E+R Sbjct: 275 DGEVDEGEVHIKPVSRKPPRQLFSEVDVKLVFKEVSSKFLRRRIVEGGKRSDGRSPCELR 334
Query: 335 PIQCSCSLLPRAHGSALFTRGETQALAVTTLGGDDMGQRLDNLTDT-DTKRFYFQYSFPP 159 PI C LLPRAHGSALFTRGETQALAV TLG M QR+DNL DT ++K FY QY+FPP Sbjct: 335 PINSQCGLLPRAHGSALFTRGETQALAVVTLGDYQMAQRIDNLVDTEESKSFYLQYTFPP 394
Query: 158 SSVGEAGRVGAPSRREIGHGVLAEKALEYALPSEEVFPYTIRLESTITESNG 3 SSVGE GR+GAP+RREIGHG+LAE+ALE LP EE FPYTIR+ESTITESNG Sbjct: 395 SSVGEVGRIGAPNRREIGHGMLAERALEPILPPEEDFPYTIRVESTITESNG 446
>tr|A2YIJ3|A2YIJ3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_25038 PE=4 SV=1 Length = 865
Score = 234 bits (597), Expect = 2e-60 Identities = 114/172 (66%), Positives = 138/172 (80%), Gaps = 1/172 (0%) Frame = -3
Query: 515 DGEVDEGDLHVKPVLQKRLSEYFDPLDVKVAFKQINSKIMRSLVIKNRKRSDGRGLAEIR 336 DGEVDEG++H+KPV +K + F +DVK+ FK+++SK +R +++ KRSDGR E+R Sbjct: 362 DGEVDEGEVHIKPVSRKPPRQLFSEVDVKLVFKEVSSKFLRRRIVEGGKRSDGRSPCELR 421
Query: 335 PIQCSCSLLPRAHGSALFTRGETQALAVTTLGGDDMGQRLDNLTDT-DTKRFYFQYSFPP 159 PI C LLPRAHGSALFTRGETQALAV TLG M QR+DNL DT ++K FY QY+FPP Sbjct: 422 PINSQCGLLPRAHGSALFTRGETQALAVVTLGDYQMAQRIDNLVDTEESKSFYLQYTFPP 481
Query: 158 SSVGEAGRVGAPSRREIGHGVLAEKALEYALPSEEVFPYTIRLESTITESNG 3 SSVGE GR+GAP+RREIGHG+LAE+ALE LP EE FPYTIR+ESTITESNG Sbjct: 482 SSVGEVGRIGAPNRREIGHGMLAERALEPILPPEEDFPYTIRVESTITESNG 533
>tr|O24288|O24288_PEA Polynucleotide phosphorylase OS=Pisum sativum GN=pnp PE=2 SV=1 Length = 897
Score = 230 bits (587), Expect = 3e-59 Identities = 115/172 (66%), Positives = 138/172 (80%), Gaps = 1/172 (0%) Frame = -3
Query: 515 DGEVDEGDLHVKPVLQKRLSEYFDPLDVKVAFKQINSKIMRSLVIKNRKRSDGRGLAEIR 336 DGEVDEGD+H+KP +K + F +DVK+ FK++ SK +R +++ KRSDGR EIR Sbjct: 396 DGEVDEGDVHIKPTPRKP-TPLFSEVDVKLVFKEVTSKFLRKRIVEGGKRSDGRTPKEIR 454
Query: 335 PIQCSCSLLPRAHGSALFTRGETQALAVTTLGGDDMGQRLDNLTDTDT-KRFYFQYSFPP 159 PI SCS+LPRAHGSALFTRGETQALAV TLG + M QR++NL + D KRFY QYSFPP Sbjct: 455 PINSSCSILPRAHGSALFTRGETQALAVATLGDNKMAQRINNLIEVDDYKRFYLQYSFPP 514
Query: 158 SSVGEAGRVGAPSRREIGHGVLAEKALEYALPSEEVFPYTIRLESTITESNG 3 S VGEAGR+GAPSRREIGHG+LAE++LE LPS+ FPYTIR+ESTITESNG Sbjct: 515 SCVGEAGRIGAPSRREIGHGMLAERSLETILPSDNDFPYTIRVESTITESNG 566
>tr|Q9S749|Q9S749_ARATH Putative polynucleotide phosphorylase OS=Arabidopsis thaliana GN=T12J13.1 PE=4 SV=1 Length = 948
Score = 229 bits (584), Expect = 7e-59 Identities = 110/172 (63%), Positives = 137/172 (79%), Gaps = 1/172 (0%) Frame = -3
Query: 515 DGEVDEGDLHVKPVLQKRLSEYFDPLDVKVAFKQINSKIMRSLVIKNRKRSDGRGLAEIR 336 +GEVD+GD+H++P+ +K + F +DVK+ FK+++SK++R +++ KRSDGR L EIR Sbjct: 424 EGEVDQGDVHIRPIPRKPIPLLFSEVDVKLVFKEVSSKLLRRRIVEGGKRSDGRTLDEIR 483
Query: 335 PIQCSCSLLPRAHGSALFTRGETQALAVTTLGGDDMGQRLDNLTDTDT-KRFYFQYSFPP 159 PI C LLPRAHGS LFTRGETQALAV TLG M QR+DNL +D KRFY QY+FPP Sbjct: 484 PINSRCGLLPRAHGSTLFTRGETQALAVVTLGDKQMAQRIDNLEGSDEYKRFYLQYTFPP 543
Query: 158 SSVGEAGRVGAPSRREIGHGVLAEKALEYALPSEEVFPYTIRLESTITESNG 3 SSVGE GR+GAPSRREIGHG LAE+ALE LPS++ FPYTIR+EST+ ESNG Sbjct: 544 SSVGEVGRIGAPSRREIGHGTLAERALETILPSDDDFPYTIRVESTVIESNG 595
>tr|Q9M497|Q9M497_ARATH Putative polynucleotide phosphorylase (Fragment) OS=Arabidopsis thaliana GN=pnp PE=2 SV=1 Length = 922
Score = 229 bits (584), Expect = 7e-59 Identities = 110/172 (63%), Positives = 137/172 (79%), Gaps = 1/172 (0%) Frame = -3
Query: 515 DGEVDEGDLHVKPVLQKRLSEYFDPLDVKVAFKQINSKIMRSLVIKNRKRSDGRGLAEIR 336 +GEVD+GD+H++P+ +K + F +DVK+ FK+++SK++R +++ KRSDGR L EIR Sbjct: 398 EGEVDQGDVHIRPIPRKPIPLLFSEVDVKLVFKEVSSKLLRRRIVEGGKRSDGRTLDEIR 457
Query: 335 PIQCSCSLLPRAHGSALFTRGETQALAVTTLGGDDMGQRLDNLTDTDT-KRFYFQYSFPP 159 PI C LLPRAHGS LFTRGETQALAV TLG M QR+DNL +D KRFY QY+FPP Sbjct: 458 PINSRCGLLPRAHGSTLFTRGETQALAVVTLGDKQMAQRIDNLEGSDEYKRFYLQYTFPP 517
Query: 158 SSVGEAGRVGAPSRREIGHGVLAEKALEYALPSEEVFPYTIRLESTITESNG 3 SSVGE GR+GAPSRREIGHG LAE+ALE LPS++ FPYTIR+EST+ ESNG Sbjct: 518 SSVGEVGRIGAPSRREIGHGTLAERALETILPSDDDFPYTIRVESTVIESNG 569
>tr|Q8GZQ3|Q8GZQ3_ARATH Polynucleotide phosphorylase OS=Arabidopsis thaliana GN=At3g03710 PE=2 SV=1 Length = 922
Score = 229 bits (584), Expect = 7e-59 Identities = 110/172 (63%), Positives = 137/172 (79%), Gaps = 1/172 (0%) Frame = -3
Query: 515 DGEVDEGDLHVKPVLQKRLSEYFDPLDVKVAFKQINSKIMRSLVIKNRKRSDGRGLAEIR 336 +GEVD+GD+H++P+ +K + F +DVK+ FK+++SK++R +++ KRSDGR L EIR Sbjct: 398 EGEVDQGDVHIRPIPRKPIPLLFSEVDVKLVFKEVSSKLLRRRIVEGGKRSDGRTLDEIR 457
Query: 335 PIQCSCSLLPRAHGSALFTRGETQALAVTTLGGDDMGQRLDNLTDTDT-KRFYFQYSFPP 159 PI C LLPRAHGS LFTRGETQALAV TLG M QR+DNL +D KRFY QY+FPP Sbjct: 458 PINSRCGLLPRAHGSTLFTRGETQALAVVTLGDKQMAQRIDNLEGSDEYKRFYLQYTFPP 517
Query: 158 SSVGEAGRVGAPSRREIGHGVLAEKALEYALPSEEVFPYTIRLESTITESNG 3 SSVGE GR+GAPSRREIGHG LAE+ALE LPS++ FPYTIR+EST+ ESNG Sbjct: 518 SSVGEVGRIGAPSRREIGHGTLAERALETILPSDDDFPYTIRVESTVIESNG 569
>tr|A7QRH7|A7QRH7_VITVI Chromosome chr8 scaffold_150, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00003824001 PE=4 SV=1 Length = 946
Score = 228 bits (582), Expect = 1e-58 Identities = 114/172 (66%), Positives = 134/172 (77%), Gaps = 1/172 (0%) Frame = -3
Query: 515 DGEVDEGDLHVKPVLQKRLSEYFDPLDVKVAFKQINSKIMRSLVIKNRKRSDGRGLAEIR 336 DGEVDEGD+H+KP+ +K +F +DVK+ FK++ SK +R +++ KRSDGR IR Sbjct: 388 DGEVDEGDVHIKPIPRKSSPLFFSEVDVKLVFKEVTSKFLRRRIVEGGKRSDGRTPDGIR 447
Query: 335 PIQCSCSLLPRAHGSALFTRGETQALAVTTLGGDDMGQRLDNLTDTD-TKRFYFQYSFPP 159 I C LLPRAHGSALFTRGETQ+LAV TLG M QR+DNL D D KRFY QYSFPP Sbjct: 448 LINSQCGLLPRAHGSALFTRGETQSLAVVTLGDRQMAQRIDNLVDVDELKRFYLQYSFPP 507
Query: 158 SSVGEAGRVGAPSRREIGHGVLAEKALEYALPSEEVFPYTIRLESTITESNG 3 S VGE GR+GAPSRREIGHG+LAE+ALE LPSE+ FPYTIR+ESTITESNG Sbjct: 508 SCVGEVGRMGAPSRREIGHGMLAERALEPILPSEDDFPYTIRVESTITESNG 559
>tr|Q41370|Q41370_SPIOL Polyribonucleotide phophorylase (Fragment) OS=Spinacia oleracea GN=So100RNP PE=2 SV=2 Length = 822
Score = 222 bits (565), Expect = 1e-56 Identities = 111/172 (64%), Positives = 130/172 (75%), Gaps = 1/172 (0%) Frame = -3
Query: 515 DGEVDEGDLHVKPVLQKRLSEYFDPLDVKVAFKQINSKIMRSLVIKNRKRSDGRGLAEIR 336 DGEVDEGD+H+KP + F +DVK+ FK+ SK +R +++ +RSDGR +R Sbjct: 388 DGEVDEGDVHIKPSPKNCTPLLFSEVDVKLVFKETTSKYLRKRIVEGGRRSDGRTSEGVR 447
Query: 335 PIQCSCSLLPRAHGSALFTRGETQALAVTTLGGDDMGQRLDNLT-DTDTKRFYFQYSFPP 159 PI C LLPRAHGSALFTRGETQALAV TLG M QR+D L D ++KRFY QYSFPP Sbjct: 448 PINSRCGLLPRAHGSALFTRGETQALAVVTLGDKQMAQRIDTLEGDDESKRFYLQYSFPP 507
Query: 158 SSVGEAGRVGAPSRREIGHGVLAEKALEYALPSEEVFPYTIRLESTITESNG 3 S VGEAGRVGAPSRREIGHG LAE+ALE LPSE+ FPYT+R+ES ITESNG Sbjct: 508 SCVGEAGRVGAPSRREIGHGTLAERALEPILPSEDEFPYTVRVESNITESNG 559
>tr|Q1G2Y1|Q1G2Y1_CHLRE Chloroplast polyribonucleotide phosphorylase OS=Chlamydomonas reinhardtii GN=PNP PE=2 SV=1 Length = 854
Score = 176 bits (447), Expect = 5e-43 Identities = 85/154 (55%), Positives = 109/154 (70%), Gaps = 5/154 (3%) Frame = -3
Query: 449 FDPLDVKVAFKQINSKIMRSLVIKNRKRSDGRGLAEIRPIQCSCSLLPRAHGSALFTRGE 270 + PL + +A + + S++MR LV+ + R+DGRG+A+IRP+ C LLPR HGSALFTRGE Sbjct: 389 YTPLQISMALEAVESRVMRGLVLDEQVRADGRGVADIRPVTCRAGLLPRTHGSALFTRGE 448
Query: 269 TQALAVTTLGGDDMGQRLDNLT-----DTDTKRFYFQYSFPPSSVGEAGRVGAPSRREIG 105 TQ++ V TLG + R D + D ++ RFY QY FPPSSVGE GR GAP RRE+G Sbjct: 449 TQSICVATLGSANDALRSDTMRKPDGEDPESGRFYLQYHFPPSSVGETGRTGAPGRRELG 508
Query: 104 HGVLAEKALEYALPSEEVFPYTIRLESTITESNG 3 HG LA++AL LP FPYT+R+ESTITESNG Sbjct: 509 HGELAQRALAPILPDPAQFPYTVRVESTITESNG 542
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