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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918971
Clone id YMU001_000119_F05
Library
Length 481
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000119_F05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
ACAGATCACTTCAGGCCAGGAGTTCTGGACCAGCCTGGTTAATATGGCAAAACCCCATCG
CTAAAAAAAAAAACCAACAACAACACTACACACATCCTGGGAGAACACACACACAAACCA
AAAGATACATATTAACCACCTTAGAATGAGAATTGCCTATAAGAAGGTTAGGGAATGAAA
GTGGGGAATTGGTGGAAAATAACAGTGTAGGAGGGGGTACAAAGATCACTGACCTTGGCC
TCAGAGACCCAGGTTGGAATCTTTACCCCTTCATTTACTAGCTGTCCAATTTGTTGAACT
CAGAGCCTACTACCTTCTTTATAAAATGAAGTATAATACATCTCATAGGGTCATTGTGAA
GATCAATAAAATTATTACCATAAGTATTAGGCAAATGCTAAGCTCTTTATAATCGTTGGT
TACCCTGTTCCTCTACCACTATCCCTCCCTCCCACACACACTTCCTCTCACTCTCTCTCC
A
■■Homology search results ■■ -
sp_hit_id Q96CB5
Definition sp|Q96CB5|CH044_HUMAN Putative uncharacterized protein C8orf44 OS=Homo sapiens
Align length 25
Score (bit) 31.2
E-value 2.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918971|Adiantum capillus-veneris mRNA, clone:
YMU001_000119_F05.
         (481 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q96CB5|CH044_HUMAN Putative uncharacterized protein C8orf44 O...    31   2.5  
sp|P40589|WNT4_DROME Protein Wnt-4 OS=Drosophila melanogaster GN...    31   3.3  
sp|Q96N38|ZN714_HUMAN Zinc finger protein 714 OS=Homo sapiens GN...    31   3.4  
sp|O75976|CBPD_HUMAN Carboxypeptidase D OS=Homo sapiens GN=CPD P...    29   9.8  

>sp|Q96CB5|CH044_HUMAN Putative uncharacterized protein C8orf44
           OS=Homo sapiens GN=C8orf44 PE=2 SV=1
          Length = 159

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +3

Query: 3   RSLQARSSGPAWLIWQNPIAKKKNQ 77
           RS + RSS PAW  W+NPI  K  +
Sbjct: 55  RSPEVRSSKPAWPTWRNPIFTKNTK 79


>sp|P40589|WNT4_DROME Protein Wnt-4 OS=Drosophila melanogaster
           GN=Wnt4 PE=2 SV=2
          Length = 539

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 9/72 (12%)
 Frame = +3

Query: 51  NPIAKKKNQQQHYTHPGRTHTQTKRY---------ILTTLE*ELPIRRLGNESGELVENN 203
           NP    +  QQH  H      Q+            IL TL        +GN +G++V ++
Sbjct: 42  NPAIHHQQHQQHQQHQQHQQHQSNHNLNNGNMNSTILNTL--------MGNNAGQVVNSS 93

Query: 204 SVGGGTKITDLG 239
             GGG+ I  LG
Sbjct: 94  PGGGGSMINQLG 105


>sp|Q96N38|ZN714_HUMAN Zinc finger protein 714 OS=Homo sapiens
           GN=ZNF714 PE=2 SV=1
          Length = 555

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 14/19 (73%), Positives = 15/19 (78%)
 Frame = +1

Query: 13  RPGVLDQPG*YGKTPSLKK 69
           R GV DQPG +GKTPSL K
Sbjct: 525 RSGVQDQPGQHGKTPSLLK 543


>sp|O75976|CBPD_HUMAN Carboxypeptidase D OS=Homo sapiens GN=CPD PE=1
           SV=2
          Length = 1380

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -1

Query: 247 SLRPRSVIFVPPPTLLFSTNSPLSFPNLLIGNSHS 143
           SLRP     +P  T   ST S ++ PN+L G S S
Sbjct: 458 SLRPTVTSVIPDTTEAVSTASTVAIPNILSGTSSS 492
tr_hit_id Q6ZP15
Definition tr|Q6ZP15|Q6ZP15_HUMAN CDNA FLJ26722 fis, clone PNC04936 OS=Homo sapiens
Align length 25
Score (bit) 37.0
E-value 0.49
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918971|Adiantum capillus-veneris mRNA, clone:
YMU001_000119_F05.
         (481 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q6ZP15|Q6ZP15_HUMAN CDNA FLJ26722 fis, clone PNC04936 OS=Homo...    37   0.49 
tr|B7WPF2|B7WPF2_HUMAN Putative uncharacterized protein ENSP0000...    36   1.1  
tr|A6NLS2|A6NLS2_HUMAN Putative uncharacterized protein ENSP0000...    35   2.4  
tr|Q9GMX5|Q9GMX5_MACFA Putative uncharacterized protein OS=Macac...    35   2.4  
tr|Q495L8|Q495L8_HUMAN RGL4 protein OS=Homo sapiens GN=RGL4 PE=2...    34   3.1  
tr|Q3ZCN2|Q3ZCN2_HUMAN RGL4 protein (Fragment) OS=Homo sapiens G...    34   3.1  
tr|B1SSK0|B1SSK0_9BACI Polar amino acid ABC transporter, inner m...    33   5.4  
tr|Q2HGK8|Q2HGK8_CHAGB Predicted protein OS=Chaetomium globosum ...    33   5.4  
tr|Q9UI86|Q9UI86_HUMAN PRO0113 OS=Homo sapiens PE=2 SV=1               33   7.0  
tr|A0S0A7|A0S0A7_HUMAN Endothelial nitric oxide synthase splice ...    33   7.0  
tr|Q96NR6|Q96NR6_HUMAN cDNA FLJ30278 fis, clone BRACE2002755 OS=...    33   7.0  
tr|Q96AN9|Q96AN9_HUMAN FAM175A protein OS=Homo sapiens GN=FAM175...    33   7.0  

>tr|Q6ZP15|Q6ZP15_HUMAN CDNA FLJ26722 fis, clone PNC04936 OS=Homo
           sapiens PE=2 SV=1
          Length = 129

 Score = 37.0 bits (84), Expect = 0.49
 Identities = 17/25 (68%), Positives = 18/25 (72%)
 Frame = +1

Query: 4   DHFRPGVLDQPG*YGKTPSLKKKTN 78
           DH R GV DQPG +GKTPSL K  N
Sbjct: 89  DHLRSGVRDQPGQHGKTPSLLKIQN 113


>tr|B7WPF2|B7WPF2_HUMAN Putative uncharacterized protein
           ENSP00000382415 OS=Homo sapiens PE=4 SV=1
          Length = 248

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 15/23 (65%), Positives = 17/23 (73%)
 Frame = -1

Query: 70  FFLAMGFCHINQAGPELLA*SDL 2
           F + MGFCH+ QAGPE LA  DL
Sbjct: 51  FLVEMGFCHVGQAGPEHLASGDL 73


>tr|A6NLS2|A6NLS2_HUMAN Putative uncharacterized protein
           ENSP00000368270 (Fragment) OS=Homo sapiens PE=4 SV=2
          Length = 111

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 15/22 (68%), Positives = 17/22 (77%)
 Frame = +1

Query: 4   DHFRPGVLDQPG*YGKTPSLKK 69
           DH R GV DQPG +G+TPSL K
Sbjct: 88  DHLRSGVQDQPGQHGETPSLLK 109


>tr|Q9GMX5|Q9GMX5_MACFA Putative uncharacterized protein OS=Macaca
           fascicularis PE=4 SV=1
          Length = 113

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +3

Query: 6   SLQARSSGPAWLIWQNPIAKKKNQ 77
           SL+++SS PAW  WQNP + KK +
Sbjct: 59  SLESKSSRPAWATWQNPASTKKTK 82


>tr|Q495L8|Q495L8_HUMAN RGL4 protein OS=Homo sapiens GN=RGL4 PE=2
           SV=1
          Length = 356

 Score = 34.3 bits (77), Expect = 3.1
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = -2

Query: 60  RWGFAILTRLVQNSWPEVI 4
           RWGF +++R+V NSWP+ I
Sbjct: 325 RWGFTMMSRIVSNSWPQAI 343


>tr|Q3ZCN2|Q3ZCN2_HUMAN RGL4 protein (Fragment) OS=Homo sapiens
           GN=RGL4 PE=2 SV=2
          Length = 536

 Score = 34.3 bits (77), Expect = 3.1
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = -2

Query: 60  RWGFAILTRLVQNSWPEVI 4
           RWGF +++R+V NSWP+ I
Sbjct: 461 RWGFTMMSRIVSNSWPQAI 479


>tr|B1SSK0|B1SSK0_9BACI Polar amino acid ABC transporter, inner
           membrane subunit OS=Geobacillus sp. WCH70
           GN=GWCH70DRAFT_1892 PE=4 SV=1
          Length = 217

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 20/53 (37%), Positives = 29/53 (54%)
 Frame = +3

Query: 57  IAKKKNQQQHYTHPGRTHTQTKRYILTTLE*ELPIRRLGNESGELVENNSVGG 215
           +A  K Q +     G T+ QT RYI+     ++ I  LGN+   LV+N+SV G
Sbjct: 111 LAVPKGQMEAARSSGLTYLQTMRYIILPQAIKIVIPPLGNQFINLVKNSSVLG 163


>tr|Q2HGK8|Q2HGK8_CHAGB Predicted protein OS=Chaetomium globosum
           GN=CHGG_00646 PE=4 SV=1
          Length = 281

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 18/42 (42%), Positives = 23/42 (54%)
 Frame = +3

Query: 21  SSGPAWLIWQNPIAKKKNQQQHYTHPGRTHTQTKRYILTTLE 146
           S  P  L  Q P +   NQQQH   P +TH+QT  Y++  LE
Sbjct: 144 SPQPTRLYKQPPHSHNHNQQQHQQQPPKTHSQT--YLIDALE 183


>tr|Q9UI86|Q9UI86_HUMAN PRO0113 OS=Homo sapiens PE=2 SV=1
          Length = 121

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = -1

Query: 76 WFFFLAMGFCHINQAGPELLA 14
          + FF+ MGFCH+ QAG ELL+
Sbjct: 37 FIFFVEMGFCHVAQAGLELLS 57


>tr|A0S0A7|A0S0A7_HUMAN Endothelial nitric oxide synthase splice
           variant eNOS13B OS=Homo sapiens PE=2 SV=1
          Length = 614

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = -2

Query: 60  RWGFAILTRLVQNSWPEVI 4
           RWGFA+L RLV NSW + I
Sbjct: 585 RWGFAMLPRLVSNSWVQAI 603