BP918975
Clone id YMU001_000119_F09
Library
Length 376
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000119_F09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTGGACAAGTGAGATACTGACGCTGCTTCTGCTTGATCTGCCTTCGGAACTGTTGGCAAC
TTGTCTACACTCCTGTCGCCGTTTTCCAAGATACAGCTTACCTTGGGGGCCTTCCTCTTC
ACAAGATTACTGCCATCGCAGGCAGCAGACGCTGGTTCTGCTGGAGAGGACACAATCGGC
GAAGAGGACACAATCGGCACCCTTCTTCTCTTATGGGCCATCCTCTTCATAGTAATACTA
TCTTCAAAATTGGACAAAGGCAATGTTGTTGCAGATTCCGATTGTTCTGGCTCTCTATCT
GATTTTGACGCCTTTAGGAGCTTGACATCCTTGCTTCCTGCTTCCAACGCTAAGCTTATA
TCAGATGCCTTCCTCT
■■Homology search results ■■ -
sp_hit_id Q11179
Definition sp|Q11179|YPC2_CAEEL Putative serine/threonine-protein kinase C05D10.2 OS=Caenorhabditis elegans
Align length 33
Score (bit) 31.2
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918975|Adiantum capillus-veneris mRNA, clone:
YMU001_000119_F09.
(376 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q11179|YPC2_CAEEL Putative serine/threonine-protein kinase C0... 31 1.7
sp|Q1RHL9|EFTU_RICBR Elongation factor Tu OS=Rickettsia bellii (... 30 2.8
sp|A8GVB2|EFTU_RICB8 Elongation factor Tu OS=Rickettsia bellii (... 30 2.8
sp|P92812|RM02_ORYSJ 60S ribosomal protein L2, mitochondrial OS=... 30 3.7
sp|Q2F969|RM02_ORYSI 60S ribosomal protein L2, mitochondrial OS=... 30 3.7
sp|P0C8K6|RM02_ORYSA 60S ribosomal protein L2, mitochondrial OS=... 30 3.7
sp|Q5ZKB7|AT134_CHICK Probable cation-transporting ATPase 13A4 O... 29 6.3
sp|Q95JK8|ACL7B_MACFA Actin-like protein 7B OS=Macaca fascicular... 29 8.3

>sp|Q11179|YPC2_CAEEL Putative serine/threonine-protein kinase
C05D10.2 OS=Caenorhabditis elegans GN=C05D10.2 PE=2 SV=2
Length = 470

Score = 31.2 bits (69), Expect = 1.7
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1

Query: 235 ILSSKLDKGNVVADSDCSGSLSDFDAFRSLTSL 333
+L L NV+ D+DC L+DF RSL+SL
Sbjct: 133 VLHRDLKPSNVLLDADCRVKLADFGLARSLSSL 165


>sp|Q1RHL9|EFTU_RICBR Elongation factor Tu OS=Rickettsia bellii
(strain RML369-C) GN=tuf PE=3 SV=1
Length = 395

Score = 30.4 bits (67), Expect = 2.8
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -3

Query: 359 ISLALEAGSKDVKLLKASKSDREPEQSESATTLPLSNFEDSITMKRMAH 213
I++ L +KD+K+ K + D PE+ E T+ ++ E + AH
Sbjct: 32 ITMVLGKDNKDIKVKKYDEIDAAPEEKERGITISTAHVEYETKSRHYAH 80


>sp|A8GVB2|EFTU_RICB8 Elongation factor Tu OS=Rickettsia bellii
(strain OSU 85-389) GN=tuf PE=3 SV=1
Length = 395

Score = 30.4 bits (67), Expect = 2.8
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -3

Query: 359 ISLALEAGSKDVKLLKASKSDREPEQSESATTLPLSNFEDSITMKRMAH 213
I++ L +KD+K+ K + D PE+ E T+ ++ E + AH
Sbjct: 32 ITMVLGKDNKDIKVKKYDEIDAAPEEKERGITISTAHVEYETKSRHYAH 80


>sp|P92812|RM02_ORYSJ 60S ribosomal protein L2, mitochondrial
OS=Oryza sativa subsp. japonica GN=RPL2 PE=2 SV=2
Length = 502

Score = 30.0 bits (66), Expect = 3.7
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1

Query: 118 FTRLLPSQAADAGSA-GEDTIGEEDTIGTLLLLWAILFIVILSSKLDKGNVVADSDCS-G 291
+ LLP +A+ GS + IGE G + A + ++ S +L+ GN+V + DCS
Sbjct: 244 YKALLPVEASRFGSLPAKPPIGEGPKDGAYKVDRAPVTYILASHQLEAGNMVINCDCSKP 303

Query: 292 SLSDFDAFRSLTSLLPASNA 351
S S F L PA NA
Sbjct: 304 SKSGF--------LRPAQNA 315


>sp|Q2F969|RM02_ORYSI 60S ribosomal protein L2, mitochondrial
OS=Oryza sativa subsp. indica GN=RPL2 PE=2 SV=2
Length = 502

Score = 30.0 bits (66), Expect = 3.7
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1

Query: 118 FTRLLPSQAADAGSA-GEDTIGEEDTIGTLLLLWAILFIVILSSKLDKGNVVADSDCS-G 291
+ LLP +A+ GS + IGE G + A + ++ S +L+ GN+V + DCS
Sbjct: 244 YKALLPVEASRFGSLPAKPPIGEGPKDGAYKVDRAPVTYILASHQLEAGNMVINCDCSKP 303

Query: 292 SLSDFDAFRSLTSLLPASNA 351
S S F L PA NA
Sbjct: 304 SKSGF--------LRPAQNA 315


>sp|P0C8K6|RM02_ORYSA 60S ribosomal protein L2, mitochondrial
OS=Oryza sativa GN=RPL2 PE=2 SV=1
Length = 502

Score = 30.0 bits (66), Expect = 3.7
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1

Query: 118 FTRLLPSQAADAGSA-GEDTIGEEDTIGTLLLLWAILFIVILSSKLDKGNVVADSDCS-G 291
+ LLP +A+ GS + IGE G + A + ++ S +L+ GN+V + DCS
Sbjct: 244 YKALLPVEASRFGSLPAKPPIGEGPKDGAYKVDRAPVTYILASHQLEAGNMVINCDCSKP 303

Query: 292 SLSDFDAFRSLTSLLPASNA 351
S S F L PA NA
Sbjct: 304 SKSGF--------LRPAQNA 315


>sp|Q5ZKB7|AT134_CHICK Probable cation-transporting ATPase 13A4
OS=Gallus gallus GN=ATP13A4 PE=2 SV=1
Length = 1204

Score = 29.3 bits (64), Expect = 6.3
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +2

Query: 62 CLHSCRRFPR-YSLPWGPS-SSQDYCHRRQQTLVLLE 166
C RRFP +SLPWGP+ + CH +L++LE
Sbjct: 505 CFQDVRRFPADHSLPWGPAFRAMVVCH----SLIVLE 537


>sp|Q95JK8|ACL7B_MACFA Actin-like protein 7B OS=Macaca fascicularis
GN=ACTL7B PE=2 SV=1
Length = 415

Score = 28.9 bits (63), Expect = 8.3
Identities = 21/76 (27%), Positives = 36/76 (47%)
Frame = +1

Query: 139 QAADAGSAGEDTIGEEDTIGTLLLLWAILFIVILSSKLDKGNVVADSDCSGSLSDFDAFR 318
+AADAG + T+ + + T L + + K +V D DC + ++ FR
Sbjct: 85 EAADAGDTRKGTLVGHELLNTETPLKLVNPL--------KHGIVVDWDCVQDIWEY-IFR 135

Query: 319 SLTSLLPASNAKLISD 366
+ +LP +A L+SD
Sbjct: 136 TAMKILPEEHAVLVSD 151


tr_hit_id A9DS31
Definition tr|A9DS31|A9DS31_9RHOB Putative uncharacterized protein OS=Oceanibulbus indolifex HEL-45
Align length 40
Score (bit) 36.2
E-value 0.83
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918975|Adiantum capillus-veneris mRNA, clone:
YMU001_000119_F09.
(376 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9DS31|A9DS31_9RHOB Putative uncharacterized protein OS=Ocean... 36 0.83
tr|Q1QYI7|Q1QYI7_CHRSD Peptidase M38, beta-aspartyl dipeptidase ... 33 9.2
tr|Q9U4U5|Q9U4U5_DROME Ral guanine nucleotide exchange factor 2,... 33 9.2
tr|Q9GR11|Q9GR11_DROME Ral guanine nucleotide dissociation stimu... 33 9.2
tr|Q86BI2|Q86BI2_DROME Ral guanine nucleotide exchange factor 2,... 33 9.2
tr|Q2M017|Q2M017_DROPS GA21377 OS=Drosophila pseudoobscura pseud... 33 9.2
tr|B4QJH5|B4QJH5_DROSI GD12645 OS=Drosophila simulans GN=GD12645... 33 9.2
tr|B4PHX1|B4PHX1_DROYA GE20045 OS=Drosophila yakuba GN=GE20045 P... 33 9.2
tr|B4N4P3|B4N4P3_DROWI GK12433 OS=Drosophila willistoni GN=GK124... 33 9.2
tr|B4HH91|B4HH91_DROSE GM24573 OS=Drosophila sechellia GN=GM2457... 33 9.2
tr|B3NHI2|B3NHI2_DROER GG13748 OS=Drosophila erecta GN=GG13748 P... 33 9.2
tr|B3MAH7|B3MAH7_DROAN GF10405 OS=Drosophila ananassae GN=GF1040... 33 9.2

>tr|A9DS31|A9DS31_9RHOB Putative uncharacterized protein
OS=Oceanibulbus indolifex HEL-45 GN=OIHEL45_01775 PE=4
SV=1
Length = 185

Score = 36.2 bits (82), Expect = 0.83
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1

Query: 97 LTLGAFLFTRLLPSQAADAGSAGEDTIGEEDTIGTLLLLW 216
L +GA LF RL+P+Q A GSAG + + L++W
Sbjct: 10 LWIGAHLFKRLMPAQRAQLGSAGRGAVTAALVVALALIIW 49


>tr|Q1QYI7|Q1QYI7_CHRSD Peptidase M38, beta-aspartyl dipeptidase
OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC
BAA-138 / NCIMB 13768) GN=Csal_1115 PE=4 SV=1
Length = 393

Score = 32.7 bits (73), Expect = 9.2
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1

Query: 235 ILSSKLDKGNVVADSDCSGSLSDFDAFRSLTSLLPASNAKLISD 366
+L+ + + SDC+GSL +FDA + + A N LI+D
Sbjct: 277 LLARGVSPARITLSSDCNGSLPEFDADGAYVGMQVARNTTLIAD 320


>tr|Q9U4U5|Q9U4U5_DROME Ral guanine nucleotide exchange factor 2,
isoform A OS=Drosophila melanogaster GN=Rgl PE=2 SV=1
Length = 954

Score = 32.7 bits (73), Expect = 9.2
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Frame = +1

Query: 115 LFTRLLPSQAADAGSAGEDTIGEEDTIGTLLLLWAILFIVILSSKLDK-------GNVVA 273
LF RL+P Q A D+ G E + T+ A+LF V+ S +D+ N+
Sbjct: 471 LFKRLIPHQCLGHTWARRDSGGSETVVATINQFNAVLFRVVSSILIDRLKPQERALNISR 530

Query: 274 DSDCSGSLSDFDAFRSLTSLLPASNAKLI 360
D + L F SL +++ A N+ I
Sbjct: 531 WIDIAQELRMLKNFSSLKAIISALNSNSI 559


>tr|Q9GR11|Q9GR11_DROME Ral guanine nucleotide dissociation
stimulator-like protein OS=Drosophila melanogaster
GN=Rgl PE=2 SV=1
Length = 774

Score = 32.7 bits (73), Expect = 9.2
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Frame = +1

Query: 115 LFTRLLPSQAADAGSAGEDTIGEEDTIGTLLLLWAILFIVILSSKLDK-------GNVVA 273
LF RL+P Q A D+ G E + T+ A+LF V+ S +D+ N+
Sbjct: 291 LFKRLIPHQCLGHTWARRDSGGSETVVATINQFNAVLFRVVSSILIDRLKPQERALNISR 350

Query: 274 DSDCSGSLSDFDAFRSLTSLLPASNAKLI 360
D + L F SL +++ A N+ I
Sbjct: 351 WIDIAQELRMLKNFSSLKAIISALNSNSI 379


>tr|Q86BI2|Q86BI2_DROME Ral guanine nucleotide exchange factor 2,
isoform B OS=Drosophila melanogaster GN=Rgl PE=1 SV=1
Length = 774

Score = 32.7 bits (73), Expect = 9.2
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Frame = +1

Query: 115 LFTRLLPSQAADAGSAGEDTIGEEDTIGTLLLLWAILFIVILSSKLDK-------GNVVA 273
LF RL+P Q A D+ G E + T+ A+LF V+ S +D+ N+
Sbjct: 291 LFKRLIPHQCLGHTWARRDSGGSETVVATINQFNAVLFRVVSSILIDRLKPQERALNISR 350

Query: 274 DSDCSGSLSDFDAFRSLTSLLPASNAKLI 360
D + L F SL +++ A N+ I
Sbjct: 351 WIDIAQELRMLKNFSSLKAIISALNSNSI 379


>tr|Q2M017|Q2M017_DROPS GA21377 OS=Drosophila pseudoobscura
pseudoobscura GN=GA21377 PE=4 SV=2
Length = 976

Score = 32.7 bits (73), Expect = 9.2
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Frame = +1

Query: 115 LFTRLLPSQAADAGSAGEDTIGEEDTIGTLLLLWAILFIVILSSKLDK-------GNVVA 273
LF RL+P Q A D+ G E + T+ A+LF V+ S +D+ N+
Sbjct: 494 LFKRLIPHQCLGHTWARRDSGGSETVVATINQFNAVLFRVVSSILIDRLKPQERALNISR 553

Query: 274 DSDCSGSLSDFDAFRSLTSLLPASNAKLI 360
D + L F SL +++ A N+ I
Sbjct: 554 WIDIAQELRMLKNFSSLKAIISALNSNSI 582


>tr|B4QJH5|B4QJH5_DROSI GD12645 OS=Drosophila simulans GN=GD12645
PE=4 SV=1
Length = 926

Score = 32.7 bits (73), Expect = 9.2
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Frame = +1

Query: 115 LFTRLLPSQAADAGSAGEDTIGEEDTIGTLLLLWAILFIVILSSKLDK-------GNVVA 273
LF RL+P Q A D+ G E + T+ A+LF V+ S +D+ N+
Sbjct: 443 LFKRLIPHQCLGHTWARRDSGGSETVVATINQFNAVLFRVVSSILIDRLKPQERALNISR 502

Query: 274 DSDCSGSLSDFDAFRSLTSLLPASNAKLI 360
D + L F SL +++ A N+ I
Sbjct: 503 WIDIAQELRMLKNFSSLKAIISALNSNSI 531


>tr|B4PHX1|B4PHX1_DROYA GE20045 OS=Drosophila yakuba GN=GE20045 PE=4
SV=1
Length = 952

Score = 32.7 bits (73), Expect = 9.2
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Frame = +1

Query: 115 LFTRLLPSQAADAGSAGEDTIGEEDTIGTLLLLWAILFIVILSSKLDK-------GNVVA 273
LF RL+P Q A D+ G E + T+ A+LF V+ S +D+ N+
Sbjct: 469 LFKRLIPHQCLGHTWARRDSGGSETVVATINQFNAVLFRVVSSILIDRLKPQERALNISR 528

Query: 274 DSDCSGSLSDFDAFRSLTSLLPASNAKLI 360
D + L F SL +++ A N+ I
Sbjct: 529 WIDIAQELRMLKNFSSLKAIISALNSNSI 557


>tr|B4N4P3|B4N4P3_DROWI GK12433 OS=Drosophila willistoni GN=GK12433
PE=4 SV=1
Length = 1001

Score = 32.7 bits (73), Expect = 9.2
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Frame = +1

Query: 115 LFTRLLPSQAADAGSAGEDTIGEEDTIGTLLLLWAILFIVILSSKLDK-------GNVVA 273
LF RL+P Q A D+ G E + T+ A+LF V+ S +D+ N+
Sbjct: 518 LFKRLIPHQCLGHTWARRDSGGSETVVATINQFNAVLFRVVSSILIDRLKPHERALNISR 577

Query: 274 DSDCSGSLSDFDAFRSLTSLLPASNAKLI 360
D + L F SL +++ A N+ I
Sbjct: 578 WIDIAQELRMLKNFSSLKAIISALNSNSI 606


>tr|B4HH91|B4HH91_DROSE GM24573 OS=Drosophila sechellia GN=GM24573
PE=4 SV=1
Length = 980

Score = 32.7 bits (73), Expect = 9.2
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Frame = +1

Query: 115 LFTRLLPSQAADAGSAGEDTIGEEDTIGTLLLLWAILFIVILSSKLDK-------GNVVA 273
LF RL+P Q A D+ G E + T+ A+LF V+ S +D+ N+
Sbjct: 497 LFKRLIPHQCLGHTWARRDSGGSETVVATINQFNAVLFRVVSSILIDRLKPQERALNISR 556

Query: 274 DSDCSGSLSDFDAFRSLTSLLPASNAKLI 360
D + L F SL +++ A N+ I
Sbjct: 557 WIDIAQELRMLKNFSSLKAIISALNSNSI 585