BP918978
Clone id YMU001_000119_G01
Library
Length 520
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000119_G01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
ATCAGCTCACAGAATCCCTACCAGTCTACACTGTGCAAGGCACTTAAGAATCCCTACCAG
TCTACATTGTGCAAGGCACTTATAGTTTTGGTTCTCACGTTGAGGCCATCACTCTTCGCA
CGGGCTTACAATTCTGCATGCAAAGCATGCTAGGGCGATGGATTTGATTCTACCGCTTCA
TGCATTACGCTTCCGCTATCACACTCGCAGCTCTGTCAAGGGCAGACTAAGAATGGATTG
TTAATATGATTGTTGGTTGCTATCAACACACAACAACACTAAAAAGAACCTAAAATTTTG
ACTAGATTCACCGACAAAGTGTCCTATTCAAGTCATCCTCCTACAATCACGACCCATACA
CGGTAGATGGTCAAGATTTGAATTGTGTTTTATGTTGCCTCTCTTGATGAGAGCGTCATA
CAGAAAGATTCTTGTATGCTTATAGGATAAGCTGCAAATCAGGCATAAGATGCCTAAGAG
CACACATTTTGGGCACACACACACTAGAAATTCAAGGAAA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918978|Adiantum capillus-veneris mRNA, clone:
YMU001_000119_G01.
(520 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id A7T327
Definition tr|A7T327|A7T327_NEMVE Predicted protein OS=Nematostella vectensis
Align length 58
Score (bit) 35.0
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918978|Adiantum capillus-veneris mRNA, clone:
YMU001_000119_G01.
(520 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7T327|A7T327_NEMVE Predicted protein OS=Nematostella vectens... 35 2.2
tr|B7U381|B7U381_HRSV Glycoprotein (Fragment) OS=Human respirato... 34 5.0

>tr|A7T327|A7T327_NEMVE Predicted protein OS=Nematostella vectensis
GN=v1g143825 PE=4 SV=1
Length = 244

Score = 35.0 bits (79), Expect = 2.2
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = +2

Query: 26 LHCARHLRIPTSLHCARHL*FWFSR*GHHSSHGLTILHAKHARAMDLILPLHALRFRY 199
LHC RHL + LHC RHL + H L + + H R L+L H R R+
Sbjct: 95 LHCMRHLVLQYHLHCMRHLVLQYHL---HRMQHLVLQYHLH-RMQHLVLQYHLHRMRH 148



Score = 33.5 bits (75), Expect = 6.5
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +2

Query: 26 LHCARHLRIPTSLHCARHL*FWFSR*GHHSSHGLTILHAKHARAMDLILPLHALR---FR 196
LHC RHL + LHC RHL + H H + H + + L LH ++ +
Sbjct: 35 LHCMRHLVLQYHLHCMRHLVLQYHL--HRMQHLVLQYHLHRMQHLVLQYHLHCMQHLVLQ 92

Query: 197 YH 202
YH
Sbjct: 93 YH 94


>tr|B7U381|B7U381_HRSV Glycoprotein (Fragment) OS=Human respiratory
syncytial virus GN=G PE=4 SV=1
Length = 107

Score = 33.9 bits (76), Expect = 5.0
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Frame = +2

Query: 8 HRIPTSLHCARHLRIPT--------SLHCARHL*FWFSR*GHHSSHGLTILH--AKHARA 157
H+ PT +HCARH I T ++HCARH + H+S + +L+ KH +
Sbjct: 31 HQYPT-IHCARHNHIKTHRKRHQHLTIHCARH-----NHIKTHNSTAIPLLNHPRKHNQL 84

Query: 158 MDLILPLHALRFRYHTRSSV 217
+ AL ++H ++ V
Sbjct: 85 HTNTHSIRALHIKFHPKTLV 104