BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918980|Adiantum capillus-veneris mRNA, clone:
YMU001_000119_G03.
         (423 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9Y4I1|MYO5A_HUMAN Myosin-Va OS=Homo sapiens GN=MYO5A PE=1 SV=1     32   1.3  
sp|P38811|TRA1_YEAST Transcription-associated protein 1 OS=Sacch...    31   1.7  
sp|Q9Z1F9|SAE2_MOUSE SUMO-activating enzyme subunit 2 OS=Mus mus...    31   2.3  
sp|O34607|SDHA_BACSU Probable L-serine dehydratase, alpha chain ...    30   3.0  
sp|Q02440|MYO5A_CHICK Myosin-Va OS=Gallus gallus GN=MYO5A PE=1 SV=1    30   3.9  
sp|A7MMD8|RNB_ENTS8 Exoribonuclease 2 OS=Enterobacter sakazakii ...    30   5.2  
sp|Q9H2Y7|ZF106_HUMAN Zinc finger protein 106 homolog OS=Homo sa...    29   8.6  

>sp|Q9Y4I1|MYO5A_HUMAN Myosin-Va OS=Homo sapiens GN=MYO5A PE=1 SV=1
          Length = 1855

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
 Frame = -3

Query: 109 EHDPACIKCTLQIV--ESPSHYLCHKKL 32
           +H+P CI C L  V  E   H+LCH+KL
Sbjct: 353 KHEPLCIFCDLMGVDYEEMCHWLCHRKL 380


>sp|P38811|TRA1_YEAST Transcription-associated protein 1
            OS=Saccharomyces cerevisiae GN=TRA1 PE=1 SV=1
          Length = 3744

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +2

Query: 149  ASSHRKYETRLTICRSNVLTTTVSDMHVRDLNVTI 253
            AS+HR  ET L +   N+L+  +SD H  ++NV +
Sbjct: 2106 ASNHRAIETELGLRAINILSELISDKHWTNVNVKL 2140


>sp|Q9Z1F9|SAE2_MOUSE SUMO-activating enzyme subunit 2 OS=Mus
           musculus GN=Uba2 PE=2 SV=1
          Length = 638

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 16/60 (26%), Positives = 25/60 (41%)
 Frame = +2

Query: 50  VVTRGLNNLKGAFDACRIMFHGRNPRPNR*STMASSHRKYETRLTICRSNVLTTTVSDMH 229
           +V  GL  L G  D CR +F  + P P +   +  +     T   +C S    T   ++H
Sbjct: 396 IVLEGLKILSGKIDQCRTIFLNKQPNPRKKLLVPCALDPPNTNCYVCASKPEVTVRLNVH 455


>sp|O34607|SDHA_BACSU Probable L-serine dehydratase, alpha chain
           OS=Bacillus subtilis GN=sdaAA PE=3 SV=1
          Length = 300

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = -1

Query: 414 LAVMDIGYGRGDRSL-SFTGIQGSDSVLLQGMVRLGLFLSIQLGLDAL 274
           L+VM+    +G   + S TG+ G D+V LQ  +R G  LS  L LDA+
Sbjct: 46  LSVMEAAVQKGLEGVTSQTGLTGGDAVKLQAYIRSGKSLSGPLILDAV 93


>sp|Q02440|MYO5A_CHICK Myosin-Va OS=Gallus gallus GN=MYO5A PE=1 SV=1
          Length = 1829

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
 Frame = -3

Query: 109 EHDPACIKCTLQIV--ESPSHYLCHKKL 32
           +HDP  I C L  V  E  +H+LCH+KL
Sbjct: 353 KHDPLTIFCDLMGVDYEEMAHWLCHRKL 380


>sp|A7MMD8|RNB_ENTS8 Exoribonuclease 2 OS=Enterobacter sakazakii
           (strain ATCC BAA-894) GN=rnb PE=3 SV=1
          Length = 644

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +1

Query: 316 PDHALQKDTVTPLNPCKAERSVSPSISN 399
           PDH L KD +    PC+AER VS    N
Sbjct: 101 PDHPLLKDAI----PCRAERGVSHDFQN 124


>sp|Q9H2Y7|ZF106_HUMAN Zinc finger protein 106 homolog OS=Homo
           sapiens GN=ZFP106 PE=1 SV=1
          Length = 1883

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 13/23 (56%), Positives = 20/23 (86%), Gaps = 2/23 (8%)
 Frame = -2

Query: 398 LDMEGETDLSALQGFR--GVTVS 336
           LD++GE DLS+L+GF+  GV++S
Sbjct: 827 LDLDGEPDLSSLEGFQWEGVSIS 849

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918980|Adiantum capillus-veneris mRNA, clone:
YMU001_000119_G03.
         (423 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******