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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918983
Clone id YMU001_000119_G06
Library
Length 498
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000119_G06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GACCGCATTGCCAACTTGCATGGTCTGTATCAACAGAAATCCAGGCAATACACAACTCTG
TAAAAAATGCCTGAACTTGCTCGGGTATGTACAGAGTGGCCTCCCCCTTCTTCCAGTCAT
GGAAAATAGCTTCGGGGAAGAGCATACTCTATATGAGGGTCATGATCCCAAGAATCCATA
CCAAGCCCCGAAACTTAATTGGTAGAAGACTTGGGAGGTGTGAAGAGTTGCACAACAGTG
CTAGAATTGGAATCCCGTCGGGAAAACTGTGCAGATCGAGGGGGATTGCTCTTGTGAGAT
GACCCTTTGAGCTTCAAGATCCGTCGGATGGACCTAGGTAAAAGCAATCCAACTCTGTTG
GAGTCCATAAGAAGAATAACTCCCAGGATGATCAGCAACCATCCGATCAACAGACAAAAT
TGTCGAAAGGCCGATACAGGTAATGTCCCTCCAAGAACCAACATGCCTATAATCACTCCT
GTGATGATCGATGCTACT
■■Homology search results ■■ -
sp_hit_id Q8NGL7
Definition sp|Q8NGL7|OR4P4_HUMAN Olfactory receptor 4P4 OS=Homo sapiens
Align length 45
Score (bit) 32.0
E-value 1.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918983|Adiantum capillus-veneris mRNA, clone:
YMU001_000119_G06.
         (498 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8NGL7|OR4P4_HUMAN Olfactory receptor 4P4 OS=Homo sapiens GN=...    32   1.6  
sp|Q9VVV9|NKD_DROME Protein naked cuticle OS=Drosophila melanoga...    32   1.6  
sp|Q2TAW0|CNDG2_XENLA Condensin-2 complex subunit G2 OS=Xenopus ...    31   2.8  
sp|Q2WED0|C3AR_ONCMY C3a anaphylatoxin chemotactic receptor OS=O...    31   2.8  
sp|A7MF23|Y2488_ENTS8 Putative transport protein ESA_02488 OS=En...    31   3.6  
sp|Q8NG78|OR8G5_HUMAN Olfactory receptor 8G5 OS=Homo sapiens GN=...    31   3.6  
sp|Q8NH89|O5AK3_HUMAN Putative olfactory receptor 5AK3 OS=Homo s...    31   3.6  
sp|Q86XI2|CNDG2_HUMAN Condensin-2 complex subunit G2 OS=Homo sap...    31   3.6  
sp|Q9CPX5|HRSL5_MOUSE HRAS-like suppressor 5 OS=Mus musculus GN=...    30   8.0  
sp|O24585|CRI4_MAIZE Putative receptor protein kinase CRINKLY4 O...    30   8.0  
sp|Q9JJX7|TTRAP_MOUSE TRAF and TNF receptor-associated protein O...    30   8.2  

>sp|Q8NGL7|OR4P4_HUMAN Olfactory receptor 4P4 OS=Homo sapiens
           GN=OR4P4 PE=2 SV=1
          Length = 312

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = -3

Query: 271 HSFPDGIPILALLCNSSHLPSLLPIKFRGLVWILGIMTLI*SMLF 137
           H F D  P+L L C++ H+  LL I   GL+ ++  + L+ S +F
Sbjct: 174 HYFCDVYPLLKLACSNIHMIGLLVIANSGLIALVTFVVLLLSYVF 218


>sp|Q9VVV9|NKD_DROME Protein naked cuticle OS=Drosophila
           melanogaster GN=nkd PE=1 SV=3
          Length = 928

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 9/90 (10%)
 Frame = -2

Query: 314 KLKGSSHKSNPPRSAQFSRRDSN---SSTVVQLFTPPKSSTN*VSGLGMDSWDHDPHIEY 144
           +++ SS  S PP     S RD+N    S VV + T P  +    SG G     H     +
Sbjct: 36  QVRASSSCSAPPDLLLVSERDNNIQLRSPVVNIITTPPGNA---SGAGSKQQSHHQTNHH 92

Query: 143 ALPRSYF------P*LEEGGGHSVHTRASS 72
           +  RS+         +  GG HS H R SS
Sbjct: 93  SSGRSHPGHTAHPQDVSSGGSHSKHLRISS 122


>sp|Q2TAW0|CNDG2_XENLA Condensin-2 complex subunit G2 OS=Xenopus
           laevis GN=ncapg2 PE=1 SV=1
          Length = 1156

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 17/78 (21%)
 Frame = +3

Query: 18  AWSVSTEIQAIHNSVKNA*TC---SGMYRVASPFFQSWKIASG-----------KSILYM 155
           +W V+  I+ IH ++KN   C   S M  +A  +F++WK ASG           +  ++ 
Sbjct: 235 SWDVNF-IKMIHGTIKNQLQCLPKSLMTHIADIYFRAWKKASGDVLQTIEQSCIQDFMHH 293

Query: 156 RVMIPR---IHTKPRNLI 200
            V +PR   +H K R ++
Sbjct: 294 GVHLPRNSPLHPKVREVL 311


>sp|Q2WED0|C3AR_ONCMY C3a anaphylatoxin chemotactic receptor
           OS=Oncorhynchus mykiss GN=c3ar1 PE=2 SV=1
          Length = 364

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -3

Query: 187 GLVWILGIMTLI*SMLFPEAIFHD 116
           GLVW+LG++  + SM++ E + HD
Sbjct: 168 GLVWVLGLLLSLPSMIYREIVVHD 191


>sp|A7MF23|Y2488_ENTS8 Putative transport protein ESA_02488
           OS=Enterobacter sakazakii (strain ATCC BAA-894)
           GN=ESA_02488 PE=3 SV=1
          Length = 560

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = +3

Query: 105 PFFQSWKIASGKSILYMRVMIPRIHTKPRNLIGRRLGR 218
           P F++ K    + +L MR++   I  K  N++GRRLG+
Sbjct: 284 PSFRNGKEVFDRDLLDMRIVTEEIVVKNHNVVGRRLGQ 321


>sp|Q8NG78|OR8G5_HUMAN Olfactory receptor 8G5 OS=Homo sapiens
           GN=OR8G5 PE=3 SV=1
          Length = 311

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 16/45 (35%), Positives = 28/45 (62%)
 Frame = -3

Query: 271 HSFPDGIPILALLCNSSHLPSLLPIKFRGLVWILGIMTLI*SMLF 137
           H F D I IL L C+S+++  LL + F G+  ++  +T++ S +F
Sbjct: 176 HYFCDLISILKLSCSSTYINELLILIFSGINILVPSLTILSSYIF 220


>sp|Q8NH89|O5AK3_HUMAN Putative olfactory receptor 5AK3 OS=Homo
           sapiens GN=OR5AK3P PE=5 SV=1
          Length = 298

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 15/45 (33%), Positives = 26/45 (57%)
 Frame = -3

Query: 271 HSFPDGIPILALLCNSSHLPSLLPIKFRGLVWILGIMTLI*SMLF 137
           H F DG+PILAL C++  +  +L + F G   +   + +I S ++
Sbjct: 176 HFFCDGLPILALSCSNIDINIILDVVFVGFDLMFTELVIIFSYIY 220


>sp|Q86XI2|CNDG2_HUMAN Condensin-2 complex subunit G2 OS=Homo
           sapiens GN=NCAPG2 PE=1 SV=1
          Length = 1143

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 17/81 (20%)
 Frame = +3

Query: 9   CQLAWSVSTEIQAIHNSVKN---A*TCSGMYRVASPFFQSWKIASGK-----------SI 146
           C   W+++  I+ IH ++KN       S M  +A  +F++WK ASGK             
Sbjct: 231 CLFNWNINF-IKMIHGTIKNQLQGLQKSLMVYIAEIYFRAWKKASGKILEAIENDCIQDF 289

Query: 147 LYMRVMIPR---IHTKPRNLI 200
           ++  + +PR   +H+K R ++
Sbjct: 290 MFHGIHLPRRSPVHSKVREVL 310


>sp|Q9CPX5|HRSL5_MOUSE HRAS-like suppressor 5 OS=Mus musculus
           GN=Hrasls5 PE=2 SV=2
          Length = 270

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
 Frame = +3

Query: 117 SWKIASGKSILYMRVMIPRIHTKPRNLIGRRL------GRCEELHNSARIGIP 257
           SWKI +     Y+ + + +I  + +N+I + +      G CE   N  R G+P
Sbjct: 184 SWKINNKLDGTYLPLPVDKIMQRTKNMINKIVQYSLIEGNCEHFVNDLRYGVP 236


>sp|O24585|CRI4_MAIZE Putative receptor protein kinase CRINKLY4
           OS=Zea mays GN=CR4 PE=2 SV=1
          Length = 901

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 18/44 (40%), Positives = 23/44 (52%)
 Frame = +2

Query: 71  LNLLGYVQSGLPLLPVMENSFGEEHTLYEGHDPKNPYQAPKLNW 202
           LNLLGY + G   L V E  F    +LY+    K+P    +LNW
Sbjct: 564 LNLLGYCEDGSERLLVYE--FMAHGSLYQHLHGKDPNLKKRLNW 605
tr_hit_id Q8RWH8
Definition tr|Q8RWH8|Q8RWH8_ARATH Putative uncharacterized protein At5g11960 OS=Arabidopsis thaliana
Align length 93
Score (bit) 42.0
E-value 0.016
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918983|Adiantum capillus-veneris mRNA, clone:
YMU001_000119_G06.
         (498 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q8RWH8|Q8RWH8_ARATH Putative uncharacterized protein At5g1196...    42   0.016
tr|Q0JJY9|Q0JJY9_ORYSJ Os01g0708300 protein (Fragment) OS=Oryza ...    37   0.40 
tr|B8A8C5|B8A8C5_ORYSI Putative uncharacterized protein OS=Oryza...    37   0.40 
tr|A2ZX28|A2ZX28_ORYSJ Putative uncharacterized protein OS=Oryza...    37   0.40 
tr|Q5KT57|Q5KT57_BOMMO Ras protein OS=Bombyx mori GN=ras3 PE=2 SV=1    35   1.5  
tr|P90891|P90891_CAEEL Protein F55H12.3, partially confirmed by ...    35   2.0  
tr|B4FVM9|B4FVM9_MAIZE Putative uncharacterized protein OS=Zea m...    34   4.4  
tr|Q68K07|Q68K07_9SAUR Olfactory receptor 2 (Fragment) OS=Chryse...    33   7.5  
tr|A7P4K1|A7P4K1_VITVI Chromosome chr4 scaffold_6, whole genome ...    33   7.5  
tr|Q8NH20|Q8NH20_HUMAN Seven transmembrane helix receptor (Fragm...    33   7.5  
tr|Q8IXE7|Q8IXE7_HUMAN Seven transmembrane helix receptor OS=Hom...    33   7.5  
tr|Q4PEE5|Q4PEE5_USTMA Putative uncharacterized protein OS=Ustil...    33   7.5  
tr|A7ESQ4|A7ESQ4_SCLS1 Putative uncharacterized protein OS=Scler...    33   7.5  
tr|B2EMX4|B2EMX4_9BACT Tetratricopeptide TPR_2 repeat protein OS...    33   9.8  
tr|A5C3Z9|A5C3Z9_VITVI Putative uncharacterized protein OS=Vitis...    33   9.8  
tr|B3M7P8|B3M7P8_DROAN GF10788 OS=Drosophila ananassae GN=GF1078...    33   9.8  

>tr|Q8RWH8|Q8RWH8_ARATH Putative uncharacterized protein At5g11960
           OS=Arabidopsis thaliana GN=At5g11960 PE=2 SV=1
          Length = 344

 Score = 42.0 bits (97), Expect = 0.016
 Identities = 31/93 (33%), Positives = 43/93 (46%)
 Frame = -2

Query: 497 VASIITGVIIGMLVLGGTLPVSAFRQFCXXXXXXXXXXXXXXLMDSNRVGLLLPRSIRRI 318
           VASI+TGV+ GM  LG  LP S   +                L+ S+R+   LPRS RR 
Sbjct: 240 VASIVTGVVAGMFALGEKLPTSPSGRLLLLLGWLLIMLGVVLLVTSSRLIRHLPRSFRR- 298

Query: 317 LKLKGSSHKSNPPRSAQFSRRDSNSSTVVQLFT 219
            +        N  R+   + +D+N S V+Q  T
Sbjct: 299 SRQTSLERGFNIRRTTSHTPKDTNPSAVIQAAT 331


>tr|Q0JJY9|Q0JJY9_ORYSJ Os01g0708300 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os01g0708300 PE=4 SV=1
          Length = 200

 Score = 37.4 bits (85), Expect = 0.40
 Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
 Frame = -2

Query: 497 VASIITGVIIGMLVLGGTLPVSAFRQFCXXXXXXXXXXXXXXLMDSNRVGLLLPRSIRRI 318
           VASI++GV+ GM+ L   LP +   +F               L+ S R+   LPRS+++ 
Sbjct: 97  VASIVSGVVAGMIALDEHLPTAPTGRFFLLLGWFFIITGVILLVSSTRIIARLPRSMQKF 156

Query: 317 LKLK-GSSHKSNPPRSAQFSRRDSNSSTVVQLFT 219
           LK     +H    P SA+   +D   ST +   T
Sbjct: 157 LKSNVERTHSIRRPSSAR--GKDPIPSTTIHAST 188


>tr|B8A8C5|B8A8C5_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_03456 PE=4 SV=1
          Length = 352

 Score = 37.4 bits (85), Expect = 0.40
 Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
 Frame = -2

Query: 497 VASIITGVIIGMLVLGGTLPVSAFRQFCXXXXXXXXXXXXXXLMDSNRVGLLLPRSIRRI 318
           VASI++GV+ GM+ L   LP +   +F               L+ S R+   LPRS+++ 
Sbjct: 249 VASIVSGVVAGMIALDEHLPTAPTGRFFLLLGWFFIITGVILLVSSTRIIARLPRSMQKF 308

Query: 317 LKLK-GSSHKSNPPRSAQFSRRDSNSSTVVQLFT 219
           LK     +H    P SA+   +D   ST +   T
Sbjct: 309 LKSNVERTHSIRRPSSAR--GKDPIPSTAIHAST 340


>tr|A2ZX28|A2ZX28_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_003100 PE=4 SV=1
          Length = 355

 Score = 37.4 bits (85), Expect = 0.40
 Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
 Frame = -2

Query: 497 VASIITGVIIGMLVLGGTLPVSAFRQFCXXXXXXXXXXXXXXLMDSNRVGLLLPRSIRRI 318
           VASI++GV+ GM+ L   LP +   +F               L+ S R+   LPRS+++ 
Sbjct: 252 VASIVSGVVAGMIALDEHLPTAPTGRFFLLLGWFFIITGVILLVSSTRIIARLPRSMQKF 311

Query: 317 LKLK-GSSHKSNPPRSAQFSRRDSNSSTVVQLFT 219
           LK     +H    P SA+   +D   ST +   T
Sbjct: 312 LKSNVERTHSIRRPSSAR--GKDPIPSTTIHAST 343


>tr|Q5KT57|Q5KT57_BOMMO Ras protein OS=Bombyx mori GN=ras3 PE=2 SV=1
          Length = 184

 Score = 35.4 bits (80), Expect = 1.5
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = -1

Query: 324 TDLEAQRVISQEQSPSICTVFPTGFQF*HCCATLHTSQVFYQL 196
           TDLEA+RV+ +EQ  ++   F   F      A +H + VFY L
Sbjct: 118 TDLEAERVVGKEQGQNLARHFNCAFMETSAKAKIHVNDVFYDL 160


>tr|P90891|P90891_CAEEL Protein F55H12.3, partially confirmed by
            transcript evidence OS=Caenorhabditis elegans GN=F55H12.3
            PE=4 SV=6
          Length = 2957

 Score = 35.0 bits (79), Expect = 2.0
 Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 2/115 (1%)
 Frame = -1

Query: 489  DHHRSDYRHVGSWRDITCIGLST--ILSVDRMVADHPGSYSSYGLQQSWIAFT*VHPTDL 316
            D++ + Y  +  ++++T  G     +   +R   D    Y++ GL  + I    + P   
Sbjct: 688  DNNHTSYGTMRKYQNLTNFGFGAFCVCGDERSQPDEWICYNTEGLMTNPINNACMLP--- 744

Query: 315  EAQRVISQEQSPSICTVFPTGFQF*HCCATLHTSQVFYQLSFGAWYGFLGS*PSY 151
            EAQ  +  +Q P+   VFPTG+     C    +   +Y   FG W    GS   Y
Sbjct: 745  EAQDALFVKQDPTDGYVFPTGYMIQMTCMICPSLIKYYTCEFGLWKTSDGSIQPY 799


>tr|B4FVM9|B4FVM9_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 192

 Score = 33.9 bits (76), Expect = 4.4
 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
 Frame = -2

Query: 497 VASIITGVIIGMLVLGGTLPVSAFRQFCXXXXXXXXXXXXXXLMDSNRVGLLLPRSIRRI 318
           VASI++GV+ GM+ L   LP +   +F               L+ S R+   LPR +++ 
Sbjct: 89  VASIVSGVVAGMIALDEHLPKAPTARFFLLLGWFFIITGVILLVSSTRLIARLPRPVQKF 148

Query: 317 LKLK-GSSHKSNPPRSAQ 267
           LK     +H    P SA+
Sbjct: 149 LKSNIERTHSIRRPGSAR 166


>tr|Q68K07|Q68K07_9SAUR Olfactory receptor 2 (Fragment) OS=Chrysemys
           picta PE=4 SV=1
          Length = 186

 Score = 33.1 bits (74), Expect = 7.5
 Identities = 14/45 (31%), Positives = 27/45 (60%)
 Frame = -3

Query: 271 HSFPDGIPILALLCNSSHLPSLLPIKFRGLVWILGIMTLI*SMLF 137
           H F D  P+L L C+ +H+  +L + F G++ +  ++ +I S L+
Sbjct: 121 HYFCDTYPLLKLACSDNHISEILLVVFSGVIAMSTLLIVIISYLY 165


>tr|A7P4K1|A7P4K1_VITVI Chromosome chr4 scaffold_6, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00032183001
           PE=4 SV=1
          Length = 294

 Score = 33.1 bits (74), Expect = 7.5
 Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 3/96 (3%)
 Frame = -2

Query: 497 VASIITGVIIGMLVLGGTLPVSAFRQFCXXXXXXXXXXXXXXLMDSNRVGLLLPRSIRRI 318
           VASI+TGV+ GML LG  LP +   +                L+ S  +   LPR +R  
Sbjct: 187 VASILTGVLAGMLALGEQLPSAPDARLSLLFGWLLIIIGVILLVSSTWLVRHLPRPLRHY 246

Query: 317 LKLKGSSHKSNPPRSAQFSR---RDSNSSTVVQLFT 219
           ++  G        +S   S    RDS+ S V+Q  T
Sbjct: 247 VQ-SGVERNFGVKQSGSRSGTRVRDSSPSAVIQAST 281


>tr|Q8NH20|Q8NH20_HUMAN Seven transmembrane helix receptor
           (Fragment) OS=Homo sapiens PE=2 SV=1
          Length = 312

 Score = 33.1 bits (74), Expect = 7.5
 Identities = 14/44 (31%), Positives = 26/44 (59%)
 Frame = -3

Query: 271 HSFPDGIPILALLCNSSHLPSLLPIKFRGLVWILGIMTLI*SML 140
           H F D  P+L L C+ +H+  +LP+ F GL+ +   + ++ S +
Sbjct: 176 HYFCDVPPLLRLSCSDAHINEMLPLVFSGLIAMFTFIVIMVSYI 219