BP918986
Clone id YMU001_000119_G09
Library
Length 522
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000119_G09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AATGATACTCGATGAGAAAGACGAGAAGATAAAATCTAGTCTCAGCCAAACTTGGGTATG
TGCTATTACCTTAAATATGTTGATGTTAAAATCTAGGAGTTTTCTTTTAAGAAGGCGTGG
CCTTCCCTTGAGATTGCAAGGCCACAGTTACTAATTGACCATAGAGTCTAGTTGTAGGTG
GGCGAAGATTGACCATAAAGTGTAATCAAACTTCCCAGAATAGAGGGCAGAAAGCTGATG
TACGGCATTTTATTTTTTGGTGCTCACCTTTCTGTTAACAGTCATCTGATCATGTTTATG
TTGTAAAGAGTTTGTGATGTTATGGCTGTTACCAACTTTATGTGAGTTGTCTCCTTATAT
GTACCTTGCTATAGCCACGTCTGAAAGCAATGACTGAAAACCCAGGTAGTGGTTAACTTA
AGCATGTAAATTAGGGGGGATTTGAAGTTCTTCAGTCTTTTGAATGTTTGTGTAGGATCT
CTCCAAGTACTATCCAATCACTCTTCCGTTGCGGAAACCTGG
■■Homology search results ■■ -
sp_hit_id Q8L5J1
Definition sp|Q8L5J1|MAN4_SOLLC Mannan endo-1,4-beta-mannosidase 4 OS=Solanum lycopersicum
Align length 85
Score (bit) 29.6
E-value 9.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918986|Adiantum capillus-veneris mRNA, clone:
YMU001_000119_G09.
(522 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8L5J1|MAN4_SOLLC Mannan endo-1,4-beta-mannosidase 4 OS=Solan... 30 9.0

>sp|Q8L5J1|MAN4_SOLLC Mannan endo-1,4-beta-mannosidase 4 OS=Solanum
lycopersicum GN=MAN4 PE=1 SV=2
Length = 399

Score = 29.6 bits (65), Expect = 9.0
Identities = 23/85 (27%), Positives = 33/85 (38%), Gaps = 2/85 (2%)
Frame = -2

Query: 479 DPTQTFKRLKNFKSPLIYMLKLTTTWVFSHCFQTWL*Q--GTYKETTHIKLVTAITSQTL 306
DP+ K F+ Y + + TW FSH L G Y E L I+
Sbjct: 63 DPSTRIKVTNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKK 122

Query: 305 YNINMIR*LLTER*APKNKMPYISF 231
Y I++I L+ A K Y+ +
Sbjct: 123 YGIHLIMSLVNNWDAFGGKKQYVEW 147


tr_hit_id Q0TM53
Definition tr|Q0TM53|Q0TM53_CLOP1 Cell wall surface anchor family protein OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Align length 56
Score (bit) 33.5
E-value 6.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918986|Adiantum capillus-veneris mRNA, clone:
YMU001_000119_G09.
(522 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q0TM53|Q0TM53_CLOP1 Cell wall surface anchor family protein O... 33 6.6
tr|Q0SPW2|Q0SPW2_CLOPS Putative uncharacterized protein OS=Clost... 33 8.6

>tr|Q0TM53|Q0TM53_CLOP1 Cell wall surface anchor family protein
OS=Clostridium perfringens (strain ATCC 13124 / NCTC
8237 / Type A) GN=CPF_2923 PE=4 SV=1
Length = 746

Score = 33.5 bits (75), Expect = 6.6
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -1

Query: 354 GDNSHKVGNSH--NITNSLQHKHDQMTVNRKVSTKK*NAVHQLSALYSGKFDYTLW 193
GD S K G S N+ + ++ D++ VN V TK NA + +L +G FDYT W
Sbjct: 64 GDVSVKAGESVRVNVNPAEGYELDKVEVNGVVLTKD-NAPSAMESLANGYFDYTFW 118


>tr|Q0SPW2|Q0SPW2_CLOPS Putative uncharacterized protein
OS=Clostridium perfringens (strain SM101 / Type A)
GN=CPR_2598 PE=4 SV=1
Length = 369

Score = 33.1 bits (74), Expect = 8.6
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -1

Query: 354 GDNSHKVGNSHNI-TNSLQ-HKHDQMTVNRKVSTKK*NAVHQLSALYSGKFDYTLW 193
GD S K G S + N + +K D++ VN V TK NA + +L +G FDYT W
Sbjct: 64 GDVSVKTGESVRVKVNPAEGYKVDKVEVNGVVLTKD-NAPSAMESLANGYFDYTFW 118



Score = 33.1 bits (74), Expect = 8.6
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -1

Query: 354 GDNSHKVGNSHNI-TNSLQ-HKHDQMTVNRKVSTKK*NAVHQLSALYSGKFDYTLW 193
GD S K G S + N + +K D++ VN V TK NA + +L +G FDYT W
Sbjct: 254 GDVSVKTGESVRVKVNPAEGYKVDKVEVNGVVLTKD-NAPSAMESLANGYFDYTFW 308