NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918988
Clone id YMU001_000119_G12
Library
Length 489
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000119_G12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TGTAACTGTGCGTCAGTCTCCTGTTCACCAACTAACAATGTTTCTCGAGAGTTTGAGAAA
GCCAGAGGGCGTTGGCCAGAAGGAGTCAACTAGTGAATCTATGACACATACTAGGTCTAT
GAAGACGGCCATAAAAGATCTTCTGCGTCCTCGCCCGAGAGAGTCTGCAAAGTGTCGAAG
AGGGTGAAGAAGCAAATCCGGGGGTGATGACGCAGTGGAAGAAATTGAGGTGGATGAGAA
GTTCGAGATGCATGACCGAGACACAGAGGTCTGGTTTGAACGGGGTATTGGACTTCTGAT
GATTACGCACTGTTCGCGCTTGGTCACAGTGGGAGAAGAATGGGTACGCAGAGCAACAAC
TCTATCATTTGCGGGAAAATGCTGACTGCATCATGGATGAAAAGGATGCCTCACCACAAC
TGGTTGTAGAGGTGTTTAAGGTGTCTCATAACCTGGCACATAAGATGAAGAAGGTCACTG
ATACTACCA
■■Homology search results ■■ -
sp_hit_id Q7ZVZ6
Definition sp|Q7ZVZ6|PREP_DANRE Presequence protease, mitochondrial OS=Danio rerio
Align length 58
Score (bit) 30.8
E-value 3.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918988|Adiantum capillus-veneris mRNA, clone:
YMU001_000119_G12.
         (489 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7ZVZ6|PREP_DANRE Presequence protease, mitochondrial OS=Dani...    31   3.4  
sp|O14686|MLL2_HUMAN Histone-lysine N-methyltransferase MLL2 OS=...    31   3.4  
sp|Q05118|PO23_POPJA Retrovirus-related Pol polyprotein from typ...    30   4.5  
sp|Q6A025|K0649_MOUSE Protein KIAA0649 OS=Mus musculus GN=Kiaa06...    30   4.5  
sp|P32943|CGS6_YEAST S-phase entry cyclin-6 OS=Saccharomyces cer...    30   7.6  
sp|P34926|MAP1A_RAT Microtubule-associated protein 1A OS=Rattus ...    30   7.8  
sp|O08999|LTBP2_MOUSE Latent-transforming growth factor beta-bin...    29   9.9  

>sp|Q7ZVZ6|PREP_DANRE Presequence protease, mitochondrial OS=Danio
           rerio GN=pitrm1 PE=2 SV=1
          Length = 1023

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = -3

Query: 292 SNTPFKPDLCVSVMHLELLIHLNFF-HCVITPGFASSPSSTLCRLSRARTQKIFYGRL 122
           S   FKP  C    + +L  ++NF   CV T  F  +  ++LC L R  T K  +G +
Sbjct: 830 SEAHFKP--CQMKTYFQLPFNVNFVSECVRTVPFTHADYASLCILGRMMTAKFLHGEI 885


>sp|O14686|MLL2_HUMAN Histone-lysine N-methyltransferase MLL2 OS=Homo
            sapiens GN=MLL2 PE=1 SV=1
          Length = 5262

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +3

Query: 177  EEGEEANPGVMTQWKKLRWMRSSRCMTETQRSG 275
            EEGE+  P  + +WK +RW R    +T  + SG
Sbjct: 4694 EEGEDTRPPRLKKWKGVRWKRLRLLLTIQKGSG 4726


>sp|Q05118|PO23_POPJA Retrovirus-related Pol polyprotein from type-1
           retrotransposable element R2 (Fragment) OS=Popillia
           japonica PE=4 SV=1
          Length = 606

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 22/69 (31%), Positives = 36/69 (52%)
 Frame = -3

Query: 316 RTVRNHQKSNTPFKPDLCVSVMHLELLIHLNFFHCVITPGFASSPSSTLCRLSRARTQKI 137
           R +RN +K+  P KP+    ++   LL  L  F+ + +PG  +       RL+R  T+KI
Sbjct: 223 RWLRNLEKA--PLKPNQKFYILKTHLLPRL--FYGLQSPGVTAGILQECDRLARRTTRKI 278

Query: 136 FYGRLHRPS 110
           F+  +H  S
Sbjct: 279 FHLNVHTGS 287


>sp|Q6A025|K0649_MOUSE Protein KIAA0649 OS=Mus musculus GN=Kiaa0649
           PE=2 SV=2
          Length = 1163

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
 Frame = +2

Query: 11  RQSPVHQLTMFLESLRKPEGV----GQKEST---SESMTHTRSMKTAIKDLLRPRPRESA 169
           ++ PV   T+ L     P+G      +KES+   S S+     +  AIKDLLR + +   
Sbjct: 610 KEQPVISRTVGLSDTHLPQGALGKATEKESSEDKSSSLDSDEDLDMAIKDLLRSKRKFKK 669

Query: 170 KCR 178
           +CR
Sbjct: 670 RCR 672


>sp|P32943|CGS6_YEAST S-phase entry cyclin-6 OS=Saccharomyces
           cerevisiae GN=CLB6 PE=1 SV=2
          Length = 380

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
 Frame = +2

Query: 44  LESLRKPEGVGQKESTSESMTHTRSMKTAIKDLLRPRPRESAKCRRG*RSKSGGDDAVEE 223
           ++SL+ P G  Q++ST    T  R +     D + P+  +  KC +           ++ 
Sbjct: 57  IDSLQLPRGKLQRDSTHLEKTRKRQLSNDSTDPIEPKTVKKIKCHQW--------KNLDS 108

Query: 224 IEVDEKFEMHDRDTEVW---FERGIGLL 298
           IE+D+ F + +    ++   +E+ I +L
Sbjct: 109 IEMDDPFMVAEYTDSIFSHLYEKEIQML 136


>sp|P34926|MAP1A_RAT Microtubule-associated protein 1A OS=Rattus
            norvegicus GN=Map1a PE=1 SV=1
          Length = 2774

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +1

Query: 4    NCASVSCSPTNNVSREFEKARGRWPEGVN 90
            N ++VSCSP        E  RG W +G N
Sbjct: 2047 NGSTVSCSPDRRTPSPKETGRGHWDDGTN 2075


>sp|O08999|LTBP2_MOUSE Latent-transforming growth factor beta-binding
            protein 2 OS=Mus musculus GN=Ltbp2 PE=1 SV=2
          Length = 1813

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -3

Query: 250  HLELLIHLNFFHCVITPGFASSPSSTLCR 164
            H E L  L  F C+  PGFAS+   T C+
Sbjct: 1180 HGECLNSLGSFFCLCAPGFASAEGGTRCQ 1208
tr_hit_id B6KH23
Definition tr|B6KH23|B6KH23_TOXGO Putative uncharacterized protein OS=Toxoplasma gondii ME49
Align length 116
Score (bit) 33.5
E-value 5.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918988|Adiantum capillus-veneris mRNA, clone:
YMU001_000119_G12.
         (489 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6KH23|B6KH23_TOXGO Putative uncharacterized protein OS=Toxop...    33   5.5  
tr|Q2BQB6|Q2BQB6_9GAMM Zinc ABC transporter, ATP-binding protein...    33   7.2  
tr|Q5K746|Q5K746_CRYNE Putative uncharacterized protein OS=Crypt...    33   7.2  
tr|Q55HK8|Q55HK8_CRYNE Putative uncharacterized protein OS=Crypt...    33   7.2  
tr|A7PTU7|A7PTU7_VITVI Chromosome chr7 scaffold_31, whole genome...    33   9.3  
tr|B6KPH3|B6KPH3_TOXGO Gamma-tubulin complex component 4, putati...    33   9.3  

>tr|B6KH23|B6KH23_TOXGO Putative uncharacterized protein OS=Toxoplasma
            gondii ME49 GN=TGME49_047790 PE=4 SV=1
          Length = 2760

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 30/116 (25%), Positives = 42/116 (36%), Gaps = 32/116 (27%)
 Frame = +2

Query: 20   PVHQLTMFLESLRKPEGV--------------------------------GQKESTSESM 103
            P+  L + +E LR+PEG                                 GQK+   E  
Sbjct: 1615 PLESLVVAVECLREPEGAVSLAERLAIGKRATALAKTLAHAAEKARKQRKGQKDQRGEGR 1674

Query: 104  THTRSMKTAIKDLLRPRPRESAKCRRG*RSKSGGDDAVEEIEVDEKFEMHDRDTEV 271
              TR      +D  + RPR + + RRG + +   DD VE     EK E  +   EV
Sbjct: 1675 RETRP-----RDATQSRPRVAQRGRRGQKVEVKDDDVVESDAETEKTEKTEETEEV 1725


>tr|Q2BQB6|Q2BQB6_9GAMM Zinc ABC transporter, ATP-binding protein
           OS=Neptuniibacter caesariensis GN=MED92_05838 PE=3 SV=1
          Length = 258

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 14/47 (29%), Positives = 29/47 (61%)
 Frame = +2

Query: 206 DDAVEEIEVDEKFEMHDRDTEVWFERGIGLLMITHCSRLVTVGEEWV 346
           D+ V+ ++++ + E+++  T +  ERG G+LM++H   LV    + V
Sbjct: 151 DEPVQGVDINGQLELYNLITRIRDERGCGVLMVSHDLHLVMAATDHV 197


>tr|Q5K746|Q5K746_CRYNE Putative uncharacterized protein
           OS=Cryptococcus neoformans GN=CNN01130 PE=4 SV=1
          Length = 245

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
 Frame = +2

Query: 137 DLLRPRPRESAKCRR--G*RSKSGGDDAVEEIEVDEKFE 247
           ++ + +PRES K RR  G R K GG DA E +E  ++F+
Sbjct: 162 EVQKRKPRESGKARRTAGFRPKQGGKDAAEIVEALKEFD 200


>tr|Q55HK8|Q55HK8_CRYNE Putative uncharacterized protein
           OS=Cryptococcus neoformans GN=CNBN1120 PE=4 SV=1
          Length = 245

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
 Frame = +2

Query: 137 DLLRPRPRESAKCRR--G*RSKSGGDDAVEEIEVDEKFE 247
           ++ + +PRES K RR  G R K GG DA E +E  ++F+
Sbjct: 162 EVQKRKPRESGKARRTAGFRPKQGGKDAAEIVEALKEFD 200


>tr|A7PTU7|A7PTU7_VITVI Chromosome chr7 scaffold_31, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00023538001
           PE=4 SV=1
          Length = 217

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
 Frame = +2

Query: 23  VHQLTMFLESLRKPEGVGQKESTSESMTHTRS----MKTAIKDLLRPRPRESAKCRRG*R 190
           V  L ++ E L     +G  + TS  +TH  S    MKT +K L   RPR  A   RG  
Sbjct: 142 VKVLDVYEERLSNSVFLGGDKFTSADLTHIPSLYLLMKTPVKRLFEERPRVRA-WYRGVM 200

Query: 191 SKSGGDDAVEEIE 229
           S+ G +  VE +E
Sbjct: 201 SRPGWEKMVEMVE 213


>tr|B6KPH3|B6KPH3_TOXGO Gamma-tubulin complex component 4, putative
            OS=Toxoplasma gondii ME49 GN=TGME49_009970 PE=4 SV=1
          Length = 1772

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 29/116 (25%), Positives = 45/116 (38%), Gaps = 5/116 (4%)
 Frame = +2

Query: 44   LESLRKPEGVGQKESTSESMTHTRSMKTAIKDLLRPRPRESAKCRRG*RSKSGGDDAVEE 223
            ++  R   G+    +        RS   A+++  RP  R     RRG   +  G+D  EE
Sbjct: 1419 VDPTRGASGLAASAAALSFFGGNRSSSRAVREQRRPGERRPGTPRRGEPRQVQGEDDEEE 1478

Query: 224  IEVDEKFEMHDRDTEVWFERGIG-----LLMITHCSRLVTVGEEWVRRATTLSFAG 376
             E  ++ E+ D     + E+G G       M +H  R     E   RR     F+G
Sbjct: 1479 EERLDEVEIEDGGEGNYEEKGEGEEERERTMCSHSFRQEADSEREARRRMPEQFSG 1534