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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918993
Clone id YMU001_000119_H05
Library
Length 245
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000119_H05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TGTCATGCAAGAATAGCAGAATCAACATGGCTAGACATGCTGACAGCTCTACAGATCACT
GGGATGGGTACATGAAGAAGAGTGACAAATGCAACCACAACTTTACATGAGGGTGCATCC
ATCCATAAGGTCGAACATTACAAAGAGTGCGACCCCAAAAGTCATGCTTGAGACACCATA
CATTCCTCCAATATAAAACCTCTTCTTTGTCTGAAAACTCTGATTGAATTTCAAAAGCTA
CTCTG
■■Homology search results ■■ -
sp_hit_id P11213
Definition sp|P11213|L_RABVP Large structural protein OS=Rabies virus (strain Pasteur vaccins / PV)
Align length 29
Score (bit) 29.6
E-value 4.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918993|Adiantum capillus-veneris mRNA, clone:
YMU001_000119_H05.
         (245 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P11213|L_RABVP Large structural protein OS=Rabies virus (stra...    30   4.9  
sp|A3RM23|L_RABVI Large structural protein OS=Rabies virus (stra...    30   4.9  
sp|Q8B6J5|L_RABVH Large structural protein OS=Rabies virus (stra...    30   4.9  
sp|A3F5L9|L_RABVE Large structural protein OS=Rabies virus (stra...    30   4.9  
sp|Q0GBX5|L_RABVD Large structural protein OS=Rabies virus (stra...    30   4.9  
sp|Q0GBY0|L_RABVR Large structural protein OS=Rabies virus (stra...    29   8.3  
sp|Q4F8Z9|L_RABVA Large structural protein OS=Rabies virus (stra...    29   8.3  

>sp|P11213|L_RABVP Large structural protein OS=Rabies virus (strain
           Pasteur vaccins / PV) GN=L PE=3 SV=2
          Length = 2142

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
 Frame = -2

Query: 220 EFSD--KEEVLYWRNVWCLKHDFWGRTLC 140
           +FSD   E + +WR +W   H+ W   LC
Sbjct: 913 QFSDPVSEGLSFWREIWLSSHESWIHALC 941


>sp|A3RM23|L_RABVI Large structural protein OS=Rabies virus (strain
           India) GN=L PE=3 SV=1
          Length = 2127

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
 Frame = -2

Query: 220 EFSD--KEEVLYWRNVWCLKHDFWGRTLC 140
           +FSD   E + +WR +W   H+ W   LC
Sbjct: 913 QFSDPVSEGLSFWREIWLSSHESWIHALC 941


>sp|Q8B6J5|L_RABVH Large structural protein OS=Rabies virus (strain
           HEP-Flury) GN=L PE=1 SV=1
          Length = 2127

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
 Frame = -2

Query: 220 EFSD--KEEVLYWRNVWCLKHDFWGRTLC 140
           +FSD   E + +WR +W   H+ W   LC
Sbjct: 913 QFSDPVSEGLSFWREIWLSSHESWIHALC 941


>sp|A3F5L9|L_RABVE Large structural protein OS=Rabies virus (strain
           ERA) GN=L PE=3 SV=1
          Length = 2127

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
 Frame = -2

Query: 220 EFSD--KEEVLYWRNVWCLKHDFWGRTLC 140
           +FSD   E + +WR +W   H+ W   LC
Sbjct: 913 QFSDPVSEGLSFWREIWLSSHESWIHALC 941


>sp|Q0GBX5|L_RABVD Large structural protein OS=Rabies virus (strain
           China/DRV) GN=L PE=3 SV=1
          Length = 2127

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
 Frame = -2

Query: 220 EFSD--KEEVLYWRNVWCLKHDFWGRTLC 140
           +FSD   E + +WR +W   H+ W   LC
Sbjct: 913 QFSDPVSEGLSFWREIWLSSHESWIHALC 941


>sp|Q0GBY0|L_RABVR Large structural protein OS=Rabies virus (strain
           China/MRV) GN=L PE=3 SV=1
          Length = 2127

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
 Frame = -2

Query: 220 EFSD--KEEVLYWRNVWCLKHDFWGRTLC 140
           +FSD   E + +WR +W   H+ W   LC
Sbjct: 913 QFSDPVSEGLSFWREIWLGSHESWIHALC 941


>sp|Q4F8Z9|L_RABVA Large structural protein OS=Rabies virus (strain
           PM1503/AVO1) GN=L PE=3 SV=1
          Length = 2127

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
 Frame = -2

Query: 220 EFSD--KEEVLYWRNVWCLKHDFWGRTLC 140
           +FSD   E + +WR +W   H+ W   LC
Sbjct: 913 QFSDPVSEGLSFWREIWLGSHESWIHALC 941
tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918993|Adiantum capillus-veneris mRNA, clone:
YMU001_000119_H05.
         (245 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******