BP918997 |
Clone id |
YMU001_000119_H09 |
Library |
YMU01 |
Length |
557 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000119_H09. |
Accession |
BP918997 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
ATACCAAAATCCATGGTATTGCTTCTCTCAACAGCAGCCCTGCTTTGACCCATAACATCT GTATCATTAATCAACTCTTTGGTCTGTACCAGTATTTTCAATCACCTCTATGGTAGAATC TATACCAGAAAAATTATGCTCTAATTCTGAGTAAGTAGCAAAAGTATCATTTGTAGCTGA ATCTTCCTGCATGTCTACTTGAATATGACTGCACTCATTCACCTACACAATTTCTTCGTG AGCTTTAGACACTTCATTTTTTTGATCCCTTGATTTCGTTTCTTCATGTACTGTATGCAT AGGTTCTTTGCAAAATTCATTCTGTGTATCCCGAACTGCATGTGTAGATTCTTTGAAAAA ATCACCTTGCATATCTTGAAGCTGTAAAGCCTCACCCTCAAACACTTCTAATTCTTCATG CACAACATCTGCAAAACCCAACTTTGCATACACAGCTTCAACTGTCTTTGTCATTAGTGT GTAAAAAAATAGCATCCTGCACAATAAACTCATCAATCACAACTTCTAACTTTGATCGTA CTTGTCGTCGAACATCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A4FWP8 |
Definition |
sp|A4FWP8|Y307_METM5 UPF0095 protein MmarC5_0307 OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) |
Align length |
85 |
Score (bit) |
32.3 |
E-value |
1.6 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q4RVK5 |
Definition |
tr|Q4RVK5|Q4RVK5_TETNG Chromosome 15 SCAF14992, whole genome shotgun sequence OS=Tetraodon nigroviridis |
Align length |
118 |
Score (bit) |
37.0 |
E-value |
0.72 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918997|Adiantum capillus-veneris mRNA, clone: YMU001_000119_H09. (557 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q4RVK5|Q4RVK5_TETNG Chromosome 15 SCAF14992, whole genome sho... 37 0.72 tr|Q7ME21|Q7ME21_VIBVY Putative uncharacterized protein VVA0863 ... 37 0.72 tr|Q234Y5|Q234Y5_TETTH Putative uncharacterized protein OS=Tetra... 35 2.1 tr|B0XH51|B0XH51_CULQU Putative uncharacterized protein OS=Culex... 35 2.1 tr|Q6AT30|Q6AT30_ORYSJ Os05g0559900 protein OS=Oryza sativa subs... 35 2.7 tr|B8AWQ0|B8AWQ0_ORYSI Putative uncharacterized protein OS=Oryza... 35 2.7 tr|A3B6R4|A3B6R4_ORYSJ Putative uncharacterized protein OS=Oryza... 35 2.7 tr|Q6TUH9|Q6TUH9_RAT LRRGT00065 OS=Rattus norvegicus PE=2 SV=1 35 3.6 tr|Q54MG8|Q54MG8_DICDI LIM domain-containing protein OS=Dictyost... 34 4.6 tr|A2EDV3|A2EDV3_TRIVA Putative uncharacterized protein OS=Trich... 34 4.6 tr|Q7XFN9|Q7XFN9_ORYSJ Retrotransposon protein, putative, Ty3-gy... 33 7.9 tr|A7QNC9|A7QNC9_VITVI Chromosome chr2 scaffold_132, whole genom... 33 7.9 tr|Q22A55|Q22A55_TETTH Cation channel family protein OS=Tetrahym... 33 7.9 tr|A4VF43|A4VF43_TETTH Putative uncharacterized protein OS=Tetra... 33 7.9 tr|A7TQW2|A7TQW2_VANPO Putative uncharacterized protein OS=Vande... 33 7.9
>tr|Q4RVK5|Q4RVK5_TETNG Chromosome 15 SCAF14992, whole genome shotgun sequence OS=Tetraodon nigroviridis GN=GSTENG00028290001 PE=4 SV=1 Length = 1493
Score = 37.0 bits (84), Expect = 0.72 Identities = 27/118 (22%), Positives = 55/118 (46%), Gaps = 20/118 (16%) Frame = -3
Query: 432 ADVVHEELEVFEGEALQLQDMQGDFFK--------ESTHAVRDTQNEFCKEPMHTVHEET 277 A VV E+ + + ++L D++K +R+T+ E +E + + +ET Sbjct: 978 ASVVRHEVAGLQSQYIELLTRSSDYYKFLGELLKNMEELKIRNTKIEMLEEQLRLLKDET 1037
Query: 276 KSRDQKN------------EVSKAHEEIV*VNECSHIQVDMQEDSATNDTFATYSELE 139 K RDQKN E+S++ E++ + E V +Q ++ +T+++L+ Sbjct: 1038 KDRDQKNKSLEDALARYKLELSQSKEQLFSLEEVKRTTV-LQANATKESLDSTHNQLQ 1094
>tr|Q7ME21|Q7ME21_VIBVY Putative uncharacterized protein VVA0863 OS=Vibrio vulnificus (strain YJ016) GN=VVA0863 PE=4 SV=1 Length = 347
Score = 37.0 bits (84), Expect = 0.72 Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 16/94 (17%) Frame = -3
Query: 327 TQNEFCKEPMHTVHEETKSRDQKNEVSKAHEEIV*VNECSHIQ--------VDMQEDSAT 172 T EF EP+ EET + +Q+N +S + + ++EC+H + +++ + Sbjct: 102 TLPEFKIEPVDNFDEETDNIEQENSLSDCNSAKINIDECNHQKSKFDSSRSMNVHSSNLM 161
Query: 171 NDTFATYS--------ELEHNFSGIDSTIEVIEN 94 ND + Y+ ++ +GID +E EN Sbjct: 162 NDPYHVYTTDLTTDLRSIQPQATGIDPVVESFEN 195
>tr|Q234Y5|Q234Y5_TETTH Putative uncharacterized protein OS=Tetrahymena thermophila SB210 GN=TTHERM_00095640 PE=4 SV=1 Length = 525
Score = 35.4 bits (80), Expect = 2.1 Identities = 21/91 (23%), Positives = 46/91 (50%), Gaps = 6/91 (6%) Frame = -3
Query: 417 EELEVFEGEALQLQDMQGDFFKESTHAVRDTQNEFCKEPMHTVHEETKSRDQKNEVSKAH 238 EE ++FEGE LQ Q + + ++E A+RD ++E +E +E + +++ E ++ Sbjct: 302 EEFQLFEGEFLQFQQGEANNYEEK--AMRDEKDEEEQEEQEQEEQEQEEEEEEQEENEKE 359
Query: 237 E------EIV*VNECSHIQVDMQEDSATNDT 163 E E ++ + +++ +D +T Sbjct: 360 EAMGDGDETKKIDNQNDVEIQFSKDEEVKNT 390
>tr|B0XH51|B0XH51_CULQU Putative uncharacterized protein OS=Culex quinquefasciatus GN=CpipJ_CPIJ018578 PE=4 SV=1 Length = 613
Score = 35.4 bits (80), Expect = 2.1 Identities = 28/93 (30%), Positives = 37/93 (39%), Gaps = 5/93 (5%) Frame = -3
Query: 429 DVVHEELEVFEGEALQLQDMQGDFFKESTHAVRDTQNEF-----CKEPMHTVHEETKSRD 265 D V EE EV E E+++ + Q + +E + Q+E KEP TV E T + Sbjct: 241 DEVQEEEEVKEEESVKEEPAQEEHKEEEVEEEEEEQHEEEVVEDKKEPAKTVEEPTIDAE 300
Query: 264 QKNEVSKAHEEIV*VNECSHIQVDMQEDSATND 166 QK I NE H Q D D Sbjct: 301 QKEHSPIVFSSITEENEAKHEDEHDQHDEEEQD 333
>tr|Q6AT30|Q6AT30_ORYSJ Os05g0559900 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0001A14.17 PE=2 SV=1 Length = 1032
Score = 35.0 bits (79), Expect = 2.7 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Frame = -3
Query: 276 KSRDQKNEVSKAHEEIV*VNECSHIQV---DMQEDSATNDTFATYSELEHNFSGIDSTIE 106 K D +NE+S +HE V++ SH++V D ++A ND A +E + + + +E Sbjct: 291 KGADDRNEISSSHENTDTVDQASHVEVIEHDEHTNAAENDEEANRTEAQ-----VATVVE 345
Query: 105 VIENT 91 ENT Sbjct: 346 REENT 350
>tr|B8AWQ0|B8AWQ0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_20957 PE=4 SV=1 Length = 1032
Score = 35.0 bits (79), Expect = 2.7 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Frame = -3
Query: 276 KSRDQKNEVSKAHEEIV*VNECSHIQV---DMQEDSATNDTFATYSELEHNFSGIDSTIE 106 K D +NE+S +HE V++ SH++V D ++A ND A +E + + + +E Sbjct: 291 KGADDRNEISSSHENTDTVDQASHVEVIEHDEHTNAAENDEEANRTEAQ-----VATVVE 345
Query: 105 VIENT 91 ENT Sbjct: 346 REENT 350
>tr|A3B6R4|A3B6R4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_018736 PE=4 SV=1 Length = 1089
Score = 35.0 bits (79), Expect = 2.7 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Frame = -3
Query: 276 KSRDQKNEVSKAHEEIV*VNECSHIQV---DMQEDSATNDTFATYSELEHNFSGIDSTIE 106 K D +NE+S +HE V++ SH++V D ++A ND A +E + + + +E Sbjct: 291 KGADDRNEISSSHENTDTVDQASHVEVIEHDEHTNAAENDEEANRTEAQ-----VATVVE 345
Query: 105 VIENT 91 ENT Sbjct: 346 REENT 350
>tr|Q6TUH9|Q6TUH9_RAT LRRGT00065 OS=Rattus norvegicus PE=2 SV=1 Length = 1104
Score = 34.7 bits (78), Expect = 3.6 Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 1/98 (1%) Frame = -3
Query: 372 MQGDFFKESTHAVRDTQNEFCKEPMHTVHEETKSRDQKNEVSKAHEEIV*VNECSHIQVD 193 M DF K+ +++R+TQ K+ +T+ + + + + + K H E I+ Sbjct: 311 MLEDFKKDVKNSLRETQENINKQE-NTIKQLKELKMEIEAIKKEHMETT-----LDIENQ 364
Query: 192 MQEDSATNDTFAT-YSELEHNFSGIDSTIEVIENTGTD 82 + A + +F E+E SG + +IE+I++T D Sbjct: 365 KKRQGAVDTSFTKRIQEIEERISGAEDSIEIIDSTAKD 402
>tr|Q54MG8|Q54MG8_DICDI LIM domain-containing protein OS=Dictyostelium discoideum GN=DDB_0238569 PE=4 SV=2 Length = 998
Score = 34.3 bits (77), Expect = 4.6 Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 1/94 (1%) Frame = -3
Query: 423 VHEELEVFEGEALQLQDMQGDFFKESTHAVRDTQNEFCKEPMHTVH-EETKSRDQKNEVS 247 +H+++E+ G L + D+Q FF R+++ HT E TK ++ E+ Sbjct: 240 IHQQVELDCGNILLVNDVQIQFFN------RNSKGHMFSYCFHTAFIEGTKIHIRRQEID 293
Query: 246 KAHEEIV*VNECSHIQVDMQEDSATNDTFATYSE 145 KAH+++ + I++ ED +D+ + E Sbjct: 294 KAHKDLKHFHSNFSIELIFLEDDRDDDSSSVSEE 327
>tr|A2EDV3|A2EDV3_TRIVA Putative uncharacterized protein OS=Trichomonas vaginalis G3 GN=TVAG_363840 PE=4 SV=1 Length = 987
Score = 34.3 bits (77), Expect = 4.6 Identities = 19/86 (22%), Positives = 42/86 (48%), Gaps = 5/86 (5%) Frame = -3
Query: 447 AKLGFADVVHEELEVFEGEALQLQDMQGDF-----FKESTHAVRDTQNEFCKEPMHTVHE 283 A + HE + F+G +L + + +F F E H V + E ++P + ++ Sbjct: 641 ALIDILSTYHENYQKFDGNSLSISNCLIEFPKELIFPEDFHNVEEEPEEEEEDPYDSFND 700
Query: 282 ETKSRDQKNEVSKAHEEIV*VNECSH 205 ++ D+K+EV+ + ++ V C++ Sbjct: 701 DSDDDDKKSEVNLLDKAMISVAYCNN 726
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