BP918997
Clone id YMU001_000119_H09
Library
Length 557
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000119_H09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ATACCAAAATCCATGGTATTGCTTCTCTCAACAGCAGCCCTGCTTTGACCCATAACATCT
GTATCATTAATCAACTCTTTGGTCTGTACCAGTATTTTCAATCACCTCTATGGTAGAATC
TATACCAGAAAAATTATGCTCTAATTCTGAGTAAGTAGCAAAAGTATCATTTGTAGCTGA
ATCTTCCTGCATGTCTACTTGAATATGACTGCACTCATTCACCTACACAATTTCTTCGTG
AGCTTTAGACACTTCATTTTTTTGATCCCTTGATTTCGTTTCTTCATGTACTGTATGCAT
AGGTTCTTTGCAAAATTCATTCTGTGTATCCCGAACTGCATGTGTAGATTCTTTGAAAAA
ATCACCTTGCATATCTTGAAGCTGTAAAGCCTCACCCTCAAACACTTCTAATTCTTCATG
CACAACATCTGCAAAACCCAACTTTGCATACACAGCTTCAACTGTCTTTGTCATTAGTGT
GTAAAAAAATAGCATCCTGCACAATAAACTCATCAATCACAACTTCTAACTTTGATCGTA
CTTGTCGTCGAACATCC
■■Homology search results ■■ -
sp_hit_id A4FWP8
Definition sp|A4FWP8|Y307_METM5 UPF0095 protein MmarC5_0307 OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333)
Align length 85
Score (bit) 32.3
E-value 1.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918997|Adiantum capillus-veneris mRNA, clone:
YMU001_000119_H09.
(557 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A4FWP8|Y307_METM5 UPF0095 protein MmarC5_0307 OS=Methanococcu... 32 1.6
sp|P03963|TRPE_BACSU Anthranilate synthase component 1 OS=Bacill... 31 3.6
sp|Q9BXT5|TEX15_HUMAN Testis-expressed sequence 15 protein OS=Ho... 31 3.6
sp|Q04632|COG8_YEAST Conserved oligomeric Golgi complex subunit ... 31 3.6
sp|P47116|PTK2_YEAST Serine/threonine-protein kinase PTK2/STK2 O... 31 4.7
sp|P24499|ATP6_TRYBB ATP synthase subunit a OS=Trypanosoma bruce... 31 4.7
sp|P97500|MYT1L_MOUSE Myelin transcription factor 1-like protein... 30 6.1
sp|O59838|HSP7F_SCHPO Heat shock protein homolog pss1 OS=Schizos... 30 8.0
sp|Q9DE13|BAZ2B_CHICK Bromodomain adjacent to zinc finger domain... 30 8.0

>sp|A4FWP8|Y307_METM5 UPF0095 protein MmarC5_0307 OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=MmarC5_0307
PE=3 SV=1
Length = 438

Score = 32.3 bits (72), Expect = 1.6
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = -3

Query: 336 VRDTQNEFCKEPMHTVHE--ETKSRDQKNEVSKAHEEIV*VNECSHIQVDMQEDSATNDT 163
+ DT E + H +E ET + E EEIV V + ++ + ATN+
Sbjct: 283 IEDTPKEIFEPVTHKYYEKVETPVIEPVFEGPVVEEEIVVVEPVKKTETEIIDVDATNEI 342

Query: 162 FATYSELEHNFSGIDSTIEVIENTG 88
A + FSG+ ++ I+NTG
Sbjct: 343 QA-----DRKFSGVKEIVDSIKNTG 362


>sp|P03963|TRPE_BACSU Anthranilate synthase component 1 OS=Bacillus
subtilis GN=trpE PE=3 SV=2
Length = 515

Score = 31.2 bits (69), Expect = 3.6
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = -3

Query: 513 MSLLCRMLFFYTLMTKTVEAV-YAKLGFADVVHEELEVFEGEALQLQDM 370
M +CR L Y TK V + YA+L + +E+++VF L+LQ++
Sbjct: 149 MLFVCRTLIAYDHETKNVHFIQYARLTGEETKNEKMDVFHQNHLELQNL 197


>sp|Q9BXT5|TEX15_HUMAN Testis-expressed sequence 15 protein OS=Homo
sapiens GN=TEX15 PE=1 SV=1
Length = 2789

Score = 31.2 bits (69), Expect = 3.6
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 9/103 (8%)
Frame = -3

Query: 399 EGEALQLQDMQGDFFKESTHAVRDTQ--NEFCKEPM------HTVHEETKSRDQKNEVSK 244
E E + L+++Q D+ KE+ + Q N FC + + ++ R+ +NE +
Sbjct: 428 ENEPVSLENIQRDY-KETAYVEDRGQDHNLFCNSQLSNDIWLNVNFKKQTDRENQNEAKE 486

Query: 243 AHEEIV*VNECSHIQVDMQEDSATNDTFATYSELE-HNFSGID 118
V N +I D ++DS TN+ F+ E E N+ I+
Sbjct: 487 NSASCV-ENNIENIYGDKKQDSHTNENFSNIDEKEDKNYHNIE 528


>sp|Q04632|COG8_YEAST Conserved oligomeric Golgi complex subunit 8
OS=Saccharomyces cerevisiae GN=COG8 PE=1 SV=1
Length = 607

Score = 31.2 bits (69), Expect = 3.6
Identities = 23/100 (23%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Frame = -3

Query: 426 VVHEELEVFEGEALQ--LQDMQGDFFKESTHAVRDTQNEFCKEPMHTVHEETKSRDQKNE 253
V + E +V E ++++ +++QG E A R T+NE E ++ ++ + ++
Sbjct: 398 VANNEEDVTENKSIEDVQEEVQGKVEGEDDGAERKTENEIENETVNKTEDKAEKEKEEEV 457

Query: 252 VSKAHEEIV*VNECSHIQVDMQEDSATNDTFATYSELEHN 133
+K ++ E + ++V +E S + D A E E N
Sbjct: 458 NTKDNKAEKEEEEINKVEVTPEEPSKSIDNKAEKEEEEIN 497


>sp|P47116|PTK2_YEAST Serine/threonine-protein kinase PTK2/STK2
OS=Saccharomyces cerevisiae GN=PTK2 PE=1 SV=1
Length = 818

Score = 30.8 bits (68), Expect = 4.7
Identities = 27/106 (25%), Positives = 49/106 (46%)
Frame = -3

Query: 411 LEVFEGEALQLQDMQGDFFKESTHAVRDTQNEFCKEPMHTVHEETKSRDQKNEVSKAHEE 232
LE+ E +L+ + D K TH V D +P ++ K +K+EV ++
Sbjct: 625 LEIAESPSLKQKSKVKDSAKTKTHDVGDEGGNESTKPK---QQDKKENLKKDEVKNGDKD 681

Query: 231 IV*VNECSHIQVDMQEDSATNDTFATYSELEHNFSGIDSTIEVIEN 94
V + E + VD + T T +++E N S DST++ +++
Sbjct: 682 KV-IEEATTTNVDSILEKPT----PTSTKVEDNLSEDDSTMKELKS 722


>sp|P24499|ATP6_TRYBB ATP synthase subunit a OS=Trypanosoma brucei
brucei GN=ATP6 PE=2 SV=1
Length = 229

Score = 30.8 bits (68), Expect = 4.7
Identities = 24/77 (31%), Positives = 37/77 (48%)
Frame = +1

Query: 184 FLHVYLNMTALIHLHNFFVSFRHFIFLIP*FRFFMYCMHRFFAKFILCIPNCMCRFFEKI 363
FL ++ N+ + L F F +FIF+ FF Y + +F FI C C F +
Sbjct: 143 FLRLFCNLLSSHFLLLMFFDFFYFIFV-----FFFYGVFCYFILFIFVF--CFCLLF-YV 194

Query: 364 TLHILKL*SLTLKHF*F 414
L++L L + L+ F F
Sbjct: 195 FLYLLDLFAAILQLFIF 211


>sp|P97500|MYT1L_MOUSE Myelin transcription factor 1-like protein
OS=Mus musculus GN=Myt1l PE=2 SV=2
Length = 1187

Score = 30.4 bits (67), Expect = 6.1
Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 13/123 (10%)
Frame = -3

Query: 471 TKTVEAVYAKLGFADVVHEELEVFEGEALQLQDMQGD------FFKESTHAVR--DTQNE 316
+ +V+ Y G D+ +E E + E + D QGD +E + D +++
Sbjct: 84 SSSVDECYESDGTEDMDDKE-EDDDEEFSEDNDEQGDDDDEDEVDREDEEEIEEEDDEDD 142

Query: 315 FCKEPMHTVHEETKSRDQKNEVSKAHEEIV*VNE-----CSHIQVDMQEDSATNDTFATY 151
E V EE + D++ E + EE NE C+ I D +D ND + Y
Sbjct: 143 DDDEDGDDVEEEEEDDDEEEEEEEEEEE----NEDHQMSCTRIMQDTDKDDNNNDEYDNY 198

Query: 150 SEL 142
EL
Sbjct: 199 DEL 201


>sp|O59838|HSP7F_SCHPO Heat shock protein homolog pss1
OS=Schizosaccharomyces pombe GN=pss1 PE=1 SV=2
Length = 720

Score = 30.0 bits (66), Expect = 8.0
Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Frame = -3

Query: 375 DMQGDFFKESTHAVRDTQNEFCKEPMHTVHEET--KSRDQKNEVSKAHEEIV*VNECSHI 202
D+ G E + V + + E EP+ T EE K D+ ++ K + + + + +
Sbjct: 490 DLHGILVVEQAYIVEEQEVE---EPVETSPEEEAEKKTDEPVKMRKVKKLV----KVADL 542

Query: 201 QVDMQEDSATNDTFATYSELEHNFSGIDSTI 109
V +QED + Y E EH D +
Sbjct: 543 SVSVQEDRLPTEVLEKYREAEHQMIATDKLV 573


>sp|Q9DE13|BAZ2B_CHICK Bromodomain adjacent to zinc finger domain
protein 2B OS=Gallus gallus GN=BAZ2B PE=2 SV=1
Length = 2130

Score = 30.0 bits (66), Expect = 8.0
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = -3

Query: 354 KESTHAVRDTQNEFCKEPMHTVHEETKSRDQKNEVSKAHEEIV*VNECSHIQVDMQEDSA 175
+ES D++NE E + V + +D K + KAHE+ + +H Q+ + DS
Sbjct: 224 EESEDDESDSENEAHHENKNKVLMHSGVKDMKTDGQKAHEKS--QEKRTHQQIPLVSDSQ 281

Query: 174 TNDTF 160
T+ +F
Sbjct: 282 THSSF 286


tr_hit_id Q4RVK5
Definition tr|Q4RVK5|Q4RVK5_TETNG Chromosome 15 SCAF14992, whole genome shotgun sequence OS=Tetraodon nigroviridis
Align length 118
Score (bit) 37.0
E-value 0.72
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918997|Adiantum capillus-veneris mRNA, clone:
YMU001_000119_H09.
(557 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q4RVK5|Q4RVK5_TETNG Chromosome 15 SCAF14992, whole genome sho... 37 0.72
tr|Q7ME21|Q7ME21_VIBVY Putative uncharacterized protein VVA0863 ... 37 0.72
tr|Q234Y5|Q234Y5_TETTH Putative uncharacterized protein OS=Tetra... 35 2.1
tr|B0XH51|B0XH51_CULQU Putative uncharacterized protein OS=Culex... 35 2.1
tr|Q6AT30|Q6AT30_ORYSJ Os05g0559900 protein OS=Oryza sativa subs... 35 2.7
tr|B8AWQ0|B8AWQ0_ORYSI Putative uncharacterized protein OS=Oryza... 35 2.7
tr|A3B6R4|A3B6R4_ORYSJ Putative uncharacterized protein OS=Oryza... 35 2.7
tr|Q6TUH9|Q6TUH9_RAT LRRGT00065 OS=Rattus norvegicus PE=2 SV=1 35 3.6
tr|Q54MG8|Q54MG8_DICDI LIM domain-containing protein OS=Dictyost... 34 4.6
tr|A2EDV3|A2EDV3_TRIVA Putative uncharacterized protein OS=Trich... 34 4.6
tr|Q7XFN9|Q7XFN9_ORYSJ Retrotransposon protein, putative, Ty3-gy... 33 7.9
tr|A7QNC9|A7QNC9_VITVI Chromosome chr2 scaffold_132, whole genom... 33 7.9
tr|Q22A55|Q22A55_TETTH Cation channel family protein OS=Tetrahym... 33 7.9
tr|A4VF43|A4VF43_TETTH Putative uncharacterized protein OS=Tetra... 33 7.9
tr|A7TQW2|A7TQW2_VANPO Putative uncharacterized protein OS=Vande... 33 7.9

>tr|Q4RVK5|Q4RVK5_TETNG Chromosome 15 SCAF14992, whole genome shotgun
sequence OS=Tetraodon nigroviridis GN=GSTENG00028290001
PE=4 SV=1
Length = 1493

Score = 37.0 bits (84), Expect = 0.72
Identities = 27/118 (22%), Positives = 55/118 (46%), Gaps = 20/118 (16%)
Frame = -3

Query: 432 ADVVHEELEVFEGEALQLQDMQGDFFK--------ESTHAVRDTQNEFCKEPMHTVHEET 277
A VV E+ + + ++L D++K +R+T+ E +E + + +ET
Sbjct: 978 ASVVRHEVAGLQSQYIELLTRSSDYYKFLGELLKNMEELKIRNTKIEMLEEQLRLLKDET 1037

Query: 276 KSRDQKN------------EVSKAHEEIV*VNECSHIQVDMQEDSATNDTFATYSELE 139
K RDQKN E+S++ E++ + E V +Q ++ +T+++L+
Sbjct: 1038 KDRDQKNKSLEDALARYKLELSQSKEQLFSLEEVKRTTV-LQANATKESLDSTHNQLQ 1094


>tr|Q7ME21|Q7ME21_VIBVY Putative uncharacterized protein VVA0863
OS=Vibrio vulnificus (strain YJ016) GN=VVA0863 PE=4 SV=1
Length = 347

Score = 37.0 bits (84), Expect = 0.72
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 16/94 (17%)
Frame = -3

Query: 327 TQNEFCKEPMHTVHEETKSRDQKNEVSKAHEEIV*VNECSHIQ--------VDMQEDSAT 172
T EF EP+ EET + +Q+N +S + + ++EC+H + +++ +
Sbjct: 102 TLPEFKIEPVDNFDEETDNIEQENSLSDCNSAKINIDECNHQKSKFDSSRSMNVHSSNLM 161

Query: 171 NDTFATYS--------ELEHNFSGIDSTIEVIEN 94
ND + Y+ ++ +GID +E EN
Sbjct: 162 NDPYHVYTTDLTTDLRSIQPQATGIDPVVESFEN 195


>tr|Q234Y5|Q234Y5_TETTH Putative uncharacterized protein
OS=Tetrahymena thermophila SB210 GN=TTHERM_00095640 PE=4
SV=1
Length = 525

Score = 35.4 bits (80), Expect = 2.1
Identities = 21/91 (23%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Frame = -3

Query: 417 EELEVFEGEALQLQDMQGDFFKESTHAVRDTQNEFCKEPMHTVHEETKSRDQKNEVSKAH 238
EE ++FEGE LQ Q + + ++E A+RD ++E +E +E + +++ E ++
Sbjct: 302 EEFQLFEGEFLQFQQGEANNYEEK--AMRDEKDEEEQEEQEQEEQEQEEEEEEQEENEKE 359

Query: 237 E------EIV*VNECSHIQVDMQEDSATNDT 163
E E ++ + +++ +D +T
Sbjct: 360 EAMGDGDETKKIDNQNDVEIQFSKDEEVKNT 390


>tr|B0XH51|B0XH51_CULQU Putative uncharacterized protein OS=Culex
quinquefasciatus GN=CpipJ_CPIJ018578 PE=4 SV=1
Length = 613

Score = 35.4 bits (80), Expect = 2.1
Identities = 28/93 (30%), Positives = 37/93 (39%), Gaps = 5/93 (5%)
Frame = -3

Query: 429 DVVHEELEVFEGEALQLQDMQGDFFKESTHAVRDTQNEF-----CKEPMHTVHEETKSRD 265
D V EE EV E E+++ + Q + +E + Q+E KEP TV E T +
Sbjct: 241 DEVQEEEEVKEEESVKEEPAQEEHKEEEVEEEEEEQHEEEVVEDKKEPAKTVEEPTIDAE 300

Query: 264 QKNEVSKAHEEIV*VNECSHIQVDMQEDSATND 166
QK I NE H Q D D
Sbjct: 301 QKEHSPIVFSSITEENEAKHEDEHDQHDEEEQD 333


>tr|Q6AT30|Q6AT30_ORYSJ Os05g0559900 protein OS=Oryza sativa subsp.
japonica GN=OSJNBa0001A14.17 PE=2 SV=1
Length = 1032

Score = 35.0 bits (79), Expect = 2.7
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = -3

Query: 276 KSRDQKNEVSKAHEEIV*VNECSHIQV---DMQEDSATNDTFATYSELEHNFSGIDSTIE 106
K D +NE+S +HE V++ SH++V D ++A ND A +E + + + +E
Sbjct: 291 KGADDRNEISSSHENTDTVDQASHVEVIEHDEHTNAAENDEEANRTEAQ-----VATVVE 345

Query: 105 VIENT 91
ENT
Sbjct: 346 REENT 350


>tr|B8AWQ0|B8AWQ0_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_20957 PE=4 SV=1
Length = 1032

Score = 35.0 bits (79), Expect = 2.7
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = -3

Query: 276 KSRDQKNEVSKAHEEIV*VNECSHIQV---DMQEDSATNDTFATYSELEHNFSGIDSTIE 106
K D +NE+S +HE V++ SH++V D ++A ND A +E + + + +E
Sbjct: 291 KGADDRNEISSSHENTDTVDQASHVEVIEHDEHTNAAENDEEANRTEAQ-----VATVVE 345

Query: 105 VIENT 91
ENT
Sbjct: 346 REENT 350


>tr|A3B6R4|A3B6R4_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_018736 PE=4 SV=1
Length = 1089

Score = 35.0 bits (79), Expect = 2.7
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = -3

Query: 276 KSRDQKNEVSKAHEEIV*VNECSHIQV---DMQEDSATNDTFATYSELEHNFSGIDSTIE 106
K D +NE+S +HE V++ SH++V D ++A ND A +E + + + +E
Sbjct: 291 KGADDRNEISSSHENTDTVDQASHVEVIEHDEHTNAAENDEEANRTEAQ-----VATVVE 345

Query: 105 VIENT 91
ENT
Sbjct: 346 REENT 350


>tr|Q6TUH9|Q6TUH9_RAT LRRGT00065 OS=Rattus norvegicus PE=2 SV=1
Length = 1104

Score = 34.7 bits (78), Expect = 3.6
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Frame = -3

Query: 372 MQGDFFKESTHAVRDTQNEFCKEPMHTVHEETKSRDQKNEVSKAHEEIV*VNECSHIQVD 193
M DF K+ +++R+TQ K+ +T+ + + + + + K H E I+
Sbjct: 311 MLEDFKKDVKNSLRETQENINKQE-NTIKQLKELKMEIEAIKKEHMETT-----LDIENQ 364

Query: 192 MQEDSATNDTFAT-YSELEHNFSGIDSTIEVIENTGTD 82
+ A + +F E+E SG + +IE+I++T D
Sbjct: 365 KKRQGAVDTSFTKRIQEIEERISGAEDSIEIIDSTAKD 402


>tr|Q54MG8|Q54MG8_DICDI LIM domain-containing protein
OS=Dictyostelium discoideum GN=DDB_0238569 PE=4 SV=2
Length = 998

Score = 34.3 bits (77), Expect = 4.6
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = -3

Query: 423 VHEELEVFEGEALQLQDMQGDFFKESTHAVRDTQNEFCKEPMHTVH-EETKSRDQKNEVS 247
+H+++E+ G L + D+Q FF R+++ HT E TK ++ E+
Sbjct: 240 IHQQVELDCGNILLVNDVQIQFFN------RNSKGHMFSYCFHTAFIEGTKIHIRRQEID 293

Query: 246 KAHEEIV*VNECSHIQVDMQEDSATNDTFATYSE 145
KAH+++ + I++ ED +D+ + E
Sbjct: 294 KAHKDLKHFHSNFSIELIFLEDDRDDDSSSVSEE 327


>tr|A2EDV3|A2EDV3_TRIVA Putative uncharacterized protein
OS=Trichomonas vaginalis G3 GN=TVAG_363840 PE=4 SV=1
Length = 987

Score = 34.3 bits (77), Expect = 4.6
Identities = 19/86 (22%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Frame = -3

Query: 447 AKLGFADVVHEELEVFEGEALQLQDMQGDF-----FKESTHAVRDTQNEFCKEPMHTVHE 283
A + HE + F+G +L + + +F F E H V + E ++P + ++
Sbjct: 641 ALIDILSTYHENYQKFDGNSLSISNCLIEFPKELIFPEDFHNVEEEPEEEEEDPYDSFND 700

Query: 282 ETKSRDQKNEVSKAHEEIV*VNECSH 205
++ D+K+EV+ + ++ V C++
Sbjct: 701 DSDDDDKKSEVNLLDKAMISVAYCNN 726