BP919001
Clone id YMU001_000120_A02
Library
Length 410
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000120_A02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTTTAGATAAAACCCTGATTAAACTACAAGAGAACATATACACCATCCATCCATGTTTCA
GGCATTTCAACTGTGCAAAACACCTGCCCGACAAAACTCGACTTGACAAGGCAAGACTCT
CACTGCTAACTGATCACAACTGAGAGTCGCAAACTAAAAGTTTCTTGACTTCCACCTGAA
AAACCAAACCCTGCTCACTATGCAGATAGAATACGTAGTACGAAACTACCTAACAGAGCA
TGAAATCATCCACTAGAATCTGACTATAAACATTGTTCTGGAAGCAATCCCTTGATCCAT
TCTTTCTCGATGTCAGTTGCACCAGTAAGTTCATCAGGCACGGTAATAAGCACTTCCTTC
AAGAGCAGTTTCACGTTCTCAGTCAGATAACTGTAGTTGCGATCAATACC
■■Homology search results ■■ -
sp_hit_id P07439
Definition sp|P07439|LEC3_MEGRO Lectin BRA-3 OS=Megabalanus rosa
Align length 55
Score (bit) 29.3
E-value 6.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919001|Adiantum capillus-veneris mRNA, clone:
YMU001_000120_A02.
(410 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P07439|LEC3_MEGRO Lectin BRA-3 OS=Megabalanus rosa PE=1 SV=2 29 6.5
sp|B0KPF4|SELU_PSEPG tRNA 2-selenouridine synthase OS=Pseudomona... 29 8.5

>sp|P07439|LEC3_MEGRO Lectin BRA-3 OS=Megabalanus rosa PE=1 SV=2
Length = 162

Score = 29.3 bits (64), Expect = 6.5
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +1

Query: 55 VSGISTVQNTCPTKLDLTRQDSHC*LITTESRKLKVS*LPPEKPNPAHYADRIRS 219
V I+T + TCP LD D HC +T + + L + +P Y I+S
Sbjct: 16 VFAITTAECTCPGNLDWQEYDGHCYWASTYQVRWNDAQLACQTVHPGAYLATIQS 70


>sp|B0KPF4|SELU_PSEPG tRNA 2-selenouridine synthase OS=Pseudomonas
putida (strain GB-1) GN=selU PE=3 SV=1
Length = 370

Score = 28.9 bits (63), Expect = 8.5
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = -1

Query: 395 YSYLTENVKLLLKEVLITVPDELTGATDIEKEWIKGLLPE 276
Y L+E ++L L+E + +GA D+ + WI+GLL E
Sbjct: 297 YQRLSEILRLALEE------QQRSGAVDLHRGWIEGLLNE 330


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919001|Adiantum capillus-veneris mRNA, clone:
YMU001_000120_A02.
(410 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******