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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919006
Clone id YMU001_000120_A08
Library
Length 526
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000120_A08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AGAATTCGCGGGCGCAGGAATGTCAGCATACGCTGCAAAGTACCCCTATGCTCAAGGCCA
AGCGTCAGTCATTGCATGACTAATTGCTCCCACTGCAAATGCACCTACTACAAATGCAAT
CTCACGTCTCGAGATGAGTATCTCGTGCATGAGACTCCCGAATGCTGATGCAATCCTAGC
AATGTCTGCCAATCTGACCATCTCAGTCAAATTTGGCTCATAACTCCACTCATAGAAATC
ACCCTGACACACGAACTCCAATCCATGGAATCCATCCTCGTGTCCATTGCATGTCACATG
CGCACCAAGAGCATCTGTCTGTTCTGAACCCTGTGTGGTAAGAGCAATTCCTAGCTCTAA
CTCACATACATCAGCCTCTGGCCTAAGCATATCCATGAATGACTGAATCATGGCTGAATC
CTCAACACTCAAGTCATCCATATCCGTCATCGTATCCACGAATGACATGCCCTGGTGCAC
AACTGGCTCAACATGCTCACAAACTAGAGCATTATGCAACCTATCC
■■Homology search results ■■ -
sp_hit_id P60412
Definition sp|P60412|KR10B_HUMAN Keratin-associated protein 10-11 OS=Homo sapiens
Align length 65
Score (bit) 33.5
E-value 0.58
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919006|Adiantum capillus-veneris mRNA, clone:
YMU001_000120_A08.
         (505 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P60412|KR10B_HUMAN Keratin-associated protein 10-11 OS=Homo s...    33   0.58 
sp|A8DZE6|WTIP_DANRE Wilms tumor protein 1-interacting protein h...    30   4.9  
sp|Q54KX0|GTAN_DICDI GATA zinc finger domain-containing protein ...    30   6.5  
sp|Q6NI74|GLMU_CORDI Bifunctional protein glmU OS=Corynebacteriu...    30   6.5  
sp|P70323|TBX1_MOUSE T-box transcription factor TBX1 OS=Mus musc...    30   8.3  
sp|Q8D2L3|FUMC_WIGBR Fumarate hydratase class II OS=Wigglesworth...    30   8.4  

>sp|P60412|KR10B_HUMAN Keratin-associated protein 10-11 OS=Homo
           sapiens GN=KRTAP10-11 PE=1 SV=1
          Length = 298

 Score = 33.5 bits (75), Expect = 0.58
 Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 11/65 (16%)
 Frame = +1

Query: 13  CKVPLCSRPSVSHC-MTNCSHCKCTYYKCNLTSRDEYLVHETPEC----------*CNPS 159
           C VP+CSR S S C   +C    CT   C  +S    L H  P C           C P+
Sbjct: 203 CCVPVCSRASYSRCQQPSCQPACCTTSCCRPSSSVSLLCH--PVCRSTCCVPVSSCCAPT 260

Query: 160 NVCQS 174
           + CQS
Sbjct: 261 SSCQS 265


>sp|A8DZE6|WTIP_DANRE Wilms tumor protein 1-interacting protein
           homolog OS=Danio rerio GN=wtip PE=3 SV=1
          Length = 648

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 7/47 (14%)
 Frame = +2

Query: 248 NPSSCPLH--VTCAPRASVCSEP-----CVVRAIPSSNSHTSASGLS 367
           +P S  +H     +PR+S+CS+P     CVV    S +SH+S S  S
Sbjct: 275 DPESAAVHGIPMASPRSSICSQPAVAANCVVSPRSSISSHSSRSSRS 321


>sp|Q54KX0|GTAN_DICDI GATA zinc finger domain-containing protein 14
           OS=Dictyostelium discoideum GN=gtaN PE=4 SV=1
          Length = 953

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 19/68 (27%), Positives = 35/68 (51%)
 Frame = +2

Query: 242 PWNPSSCPLHVTCAPRASVCSEPCVVRAIPSSNSHTSASGLSISMND*IMAESSTLKSSI 421
           P +PS+ P+ ++  P ASV  +P    +  SS++H   S   I+    I + S     ++
Sbjct: 126 PGSPSASPIPISSIPTASVYRQPF---SSSSSSNHDQGSYPIINTKSIIPSASQLQSQNL 182

Query: 422 SVIVSTND 445
           ++I S N+
Sbjct: 183 NIINSINN 190


>sp|Q6NI74|GLMU_CORDI Bifunctional protein glmU OS=Corynebacterium
           diphtheriae GN=glmU PE=3 SV=1
          Length = 484

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
 Frame = -2

Query: 393 AMIQSFMDMLRPEADVCELELGIALTTQGSEQTDALGAHVTCNGHE-DGFHGLEFVCQGD 217
           A+I    + +RPE +     +   ++    EQ +  G  V C  HE +GF G   V  GD
Sbjct: 54  AVIGHRREQVRPEVEAVAATVDCEISVAIQEQQNGTGHAVQCAMHELEGFEGTVVVTNGD 113


>sp|P70323|TBX1_MOUSE T-box transcription factor TBX1 OS=Mus
           musculus GN=Tbx1 PE=2 SV=2
          Length = 479

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 243 HGIHPRVHCMSHAHQEHLSVLNP 311
           HG HP  H  +H H  H   +NP
Sbjct: 429 HGYHPHAHPHAHPHHHHHPAVNP 451


>sp|Q8D2L3|FUMC_WIGBR Fumarate hydratase class II OS=Wigglesworthia
           glossinidia brevipalpis GN=fumC PE=3 SV=1
          Length = 464

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = +2

Query: 365 SISMND*IMAESSTLKS-SISVIVSTNDMPWCTTGSTC 475
           S+S  D I+   STLK+ SIS++  +ND+ W ++G  C
Sbjct: 267 SLSTCDAIVKVHSTLKNLSISIMKISNDIRWLSSGPRC 304
tr_hit_id Q5KDH4
Definition tr|Q5KDH4|Q5KDH4_CRYNE Putative uncharacterized protein OS=Cryptococcus neoformans
Align length 44
Score (bit) 39.3
E-value 0.11
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919006|Adiantum capillus-veneris mRNA, clone:
YMU001_000120_A08.
         (505 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q5KDH4|Q5KDH4_CRYNE Putative uncharacterized protein OS=Crypt...    39   0.11 
tr|Q55PY8|Q55PY8_CRYNE Putative uncharacterized protein OS=Crypt...    39   0.11 
tr|A4QTC8|A4QTC8_MAGGR Putative uncharacterized protein OS=Magna...    35   1.6  
tr|A9RFP6|A9RFP6_PHYPA Predicted protein OS=Physcomitrella paten...    35   2.1  
tr|B6KIX7|B6KIX7_TOXGO Ribonuclease II RNB family protein OS=Tox...    34   4.6  
tr|A4HM87|A4HM87_LEIBR Proteophosphoglycan ppg4 OS=Leishmania br...    34   4.6  
tr|A8J718|A8J718_CHLRE Magnesium chelatase subunit H (Fragment) ...    33   7.6  
tr|Q22ZG0|Q22ZG0_TETTH Putative uncharacterized protein OS=Tetra...    33   7.8  
tr|Q2HG84|Q2HG84_CHAGB Putative uncharacterized protein OS=Chaet...    33   7.8  

>tr|Q5KDH4|Q5KDH4_CRYNE Putative uncharacterized protein
           OS=Cryptococcus neoformans GN=CNG03970 PE=4 SV=1
          Length = 346

 Score = 39.3 bits (90), Expect = 0.11
 Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 10/44 (22%)
 Frame = +3

Query: 222 PDTRTPI---HGIHPRVHCMSHAH-------QEHLSVLNPVW*E 323
           P+T+ PI   HG   +VHCM H H       QE +S LNP+W E
Sbjct: 140 PNTKPPILELHGTLAKVHCMKHRHEQSRDEYQEQISRLNPIWDE 183


>tr|Q55PY8|Q55PY8_CRYNE Putative uncharacterized protein
           OS=Cryptococcus neoformans GN=CNBG0760 PE=4 SV=1
          Length = 361

 Score = 39.3 bits (90), Expect = 0.11
 Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 10/44 (22%)
 Frame = +3

Query: 222 PDTRTPI---HGIHPRVHCMSHAH-------QEHLSVLNPVW*E 323
           P+T+ PI   HG   +VHCM H H       QE +S LNP+W E
Sbjct: 147 PNTKPPILELHGTLAKVHCMKHRHEQSRDEYQEQISRLNPIWDE 190


>tr|A4QTC8|A4QTC8_MAGGR Putative uncharacterized protein
           OS=Magnaporthe grisea GN=MGG_12939 PE=4 SV=1
          Length = 593

 Score = 35.4 bits (80), Expect = 1.6
 Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 11/86 (12%)
 Frame = +2

Query: 260 CPLHVTCAPRASVCSEPC------VVRAIPSSNSHTSASGLSISMND*IMAESSTLKSSI 421
           C +H  C    S C + C      V  +  SS+S TSAS  S+S      ++SST  S+I
Sbjct: 430 CSVHGWCGSTDSYCGDGCQPVPLSVASSSVSSSSSTSASPTSVSTTSASSSQSSTSTSTI 489

Query: 422 -----SVIVSTNDMPWCTTGSTCSQT 484
                S I ST+     T+ S  S T
Sbjct: 490 VPLDTSSIDSTSTSASSTSASVSSST 515


>tr|A9RFP6|A9RFP6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_65494 PE=4 SV=1
          Length = 597

 Score = 35.0 bits (79), Expect = 2.1
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +2

Query: 245 WNPSSCPLHVTCAPRASVCSEPCVVRAIPSSNS 343
           W P++C + VTC PR+  C   C+VR +P S S
Sbjct: 540 WVPNACDVIVTCTPRSCAC---CIVRHLPISLS 569


>tr|B6KIX7|B6KIX7_TOXGO Ribonuclease II RNB family protein
           OS=Toxoplasma gondii ME49 GN=TGME49_002720 PE=4 SV=1
          Length = 1882

 Score = 33.9 bits (76), Expect = 4.6
 Identities = 19/42 (45%), Positives = 26/42 (61%)
 Frame = +2

Query: 236 SNPWNPSSCPLHVTCAPRASVCSEPCVVRAIPSSNSHTSASG 361
           S P +PSS P HV+ +P  +  S P +V A  SS+S +S SG
Sbjct: 63  SEPHSPSSLPCHVSLSPE-NASSAPSLVSASSSSSSASSDSG 103


>tr|A4HM87|A4HM87_LEIBR Proteophosphoglycan ppg4 OS=Leishmania
            braziliensis GN=LbrM34_V2.0540 PE=4 SV=1
          Length = 5384

 Score = 33.9 bits (76), Expect = 4.6
 Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
 Frame = +2

Query: 218  SP*HTNSNPWNPSSCPLHVTCAPRASVCSEPCVVRAIPSSNSH---TSASGLSISMND*I 388
            +P  ++S P + SS P   +CAP +S  S P    + PSS+S    +S+S    S +   
Sbjct: 4802 APSSSSSAPSSSSSAPSSSSCAPSSSSSSAPSSSSSAPSSSSSSAPSSSSSAPSSSSSSA 4861

Query: 389  MAESSTLKSSISVIVSTNDMPWCTTGSTCSQTRALC 496
             + SS+  SS S    ++     ++ S+ + + + C
Sbjct: 4862 PSSSSSAPSSSSSSAPSSSSSAPSSSSSSAPSSSSC 4897


>tr|A8J718|A8J718_CHLRE Magnesium chelatase subunit H (Fragment)
           OS=Chlamydomonas reinhardtii GN=CHLH2 PE=4 SV=1
          Length = 1253

 Score = 33.1 bits (74), Expect = 7.6
 Identities = 17/41 (41%), Positives = 18/41 (43%)
 Frame = +3

Query: 159 QCLPI*PSQSNLAHNSTHRNHPDTRTPIHGIHPRVHCMSHA 281
           QC    P  S   H  TH  H  T T  H  HPR H  +HA
Sbjct: 496 QCRNSFPEMSTHTHTHTH-THTHTHTHTHTRHPRTHTHTHA 535


>tr|Q22ZG0|Q22ZG0_TETTH Putative uncharacterized protein
           OS=Tetrahymena thermophila SB210 GN=TTHERM_01097970 PE=4
           SV=1
          Length = 1094

 Score = 33.1 bits (74), Expect = 7.8
 Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 13/130 (10%)
 Frame = +2

Query: 140 NADAILAMSANLTISVKFGS*LHS*KSP*HTNSNPWNPSSCPLHVTCAPRASVCSEPCVV 319
           N+  IL  + N T+ V   +   S ++P     N WN + C L     P AS+ +  C+V
Sbjct: 291 NSTQILFANYNGTVCVASSASCGSSRAP-----NTWNDADCALCNPSTPVASIDNSTCIV 345

Query: 320 RAIPSSNSHTSASGL-------------SISMND*IMAESSTLKSSISVIVSTNDMPWCT 460
             I   N+  + SGL             S + N+     +++  S+  V  + N      
Sbjct: 346 --ITQQNNCNATSGLTDAICASCYQQFNSTNSNNNSTNANNSTNSNEPVFANQNGTACVA 403

Query: 461 TGSTCSQTRA 490
           + ++C   RA
Sbjct: 404 SSASCGSNRA 413


>tr|Q2HG84|Q2HG84_CHAGB Putative uncharacterized protein
           OS=Chaetomium globosum GN=CHGG_00770 PE=4 SV=1
          Length = 586

 Score = 33.1 bits (74), Expect = 7.8
 Identities = 18/72 (25%), Positives = 33/72 (45%)
 Frame = +2

Query: 248 NPSSCPLHVTCAPRASVCSEPCVVRAIPSSNSHTSASGLSISMND*IMAESSTLKSSISV 427
           NP+ C +   C P   +C+         S+ S T++S  S + +    + SST K++ + 
Sbjct: 271 NPADCYVERGCQPAFGICASNSNSTTTSSATSGTTSSATSTTSSTKTTSSSSTTKTTSTS 330

Query: 428 IVSTNDMPWCTT 463
              ++  P  TT
Sbjct: 331 TTPSSSTPGTTT 342