BP919006
Clone id YMU001_000120_A08
Library
Length 526
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000120_A08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AGAATTCGCGGGCGCAGGAATGTCAGCATACGCTGCAAAGTACCCCTATGCTCAAGGCCA
AGCGTCAGTCATTGCATGACTAATTGCTCCCACTGCAAATGCACCTACTACAAATGCAAT
CTCACGTCTCGAGATGAGTATCTCGTGCATGAGACTCCCGAATGCTGATGCAATCCTAGC
AATGTCTGCCAATCTGACCATCTCAGTCAAATTTGGCTCATAACTCCACTCATAGAAATC
ACCCTGACACACGAACTCCAATCCATGGAATCCATCCTCGTGTCCATTGCATGTCACATG
CGCACCAAGAGCATCTGTCTGTTCTGAACCCTGTGTGGTAAGAGCAATTCCTAGCTCTAA
CTCACATACATCAGCCTCTGGCCTAAGCATATCCATGAATGACTGAATCATGGCTGAATC
CTCAACACTCAAGTCATCCATATCCGTCATCGTATCCACGAATGACATGCCCTGGTGCAC
AACTGGCTCAACATGCTCACAAACTAGAGCATTATGCAACCTATCC
■■Homology search results ■■ -
sp_hit_id P60412
Definition sp|P60412|KR10B_HUMAN Keratin-associated protein 10-11 OS=Homo sapiens
Align length 65
Score (bit) 33.5
E-value 0.58
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919006|Adiantum capillus-veneris mRNA, clone:
YMU001_000120_A08.
(505 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P60412|KR10B_HUMAN Keratin-associated protein 10-11 OS=Homo s... 33 0.58
sp|A8DZE6|WTIP_DANRE Wilms tumor protein 1-interacting protein h... 30 4.9
sp|Q54KX0|GTAN_DICDI GATA zinc finger domain-containing protein ... 30 6.5
sp|Q6NI74|GLMU_CORDI Bifunctional protein glmU OS=Corynebacteriu... 30 6.5
sp|P70323|TBX1_MOUSE T-box transcription factor TBX1 OS=Mus musc... 30 8.3
sp|Q8D2L3|FUMC_WIGBR Fumarate hydratase class II OS=Wigglesworth... 30 8.4

>sp|P60412|KR10B_HUMAN Keratin-associated protein 10-11 OS=Homo
sapiens GN=KRTAP10-11 PE=1 SV=1
Length = 298

Score = 33.5 bits (75), Expect = 0.58
Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 11/65 (16%)
Frame = +1

Query: 13 CKVPLCSRPSVSHC-MTNCSHCKCTYYKCNLTSRDEYLVHETPEC----------*CNPS 159
C VP+CSR S S C +C CT C +S L H P C C P+
Sbjct: 203 CCVPVCSRASYSRCQQPSCQPACCTTSCCRPSSSVSLLCH--PVCRSTCCVPVSSCCAPT 260

Query: 160 NVCQS 174
+ CQS
Sbjct: 261 SSCQS 265


>sp|A8DZE6|WTIP_DANRE Wilms tumor protein 1-interacting protein
homolog OS=Danio rerio GN=wtip PE=3 SV=1
Length = 648

Score = 30.4 bits (67), Expect = 4.9
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 7/47 (14%)
Frame = +2

Query: 248 NPSSCPLH--VTCAPRASVCSEP-----CVVRAIPSSNSHTSASGLS 367
+P S +H +PR+S+CS+P CVV S +SH+S S S
Sbjct: 275 DPESAAVHGIPMASPRSSICSQPAVAANCVVSPRSSISSHSSRSSRS 321


>sp|Q54KX0|GTAN_DICDI GATA zinc finger domain-containing protein 14
OS=Dictyostelium discoideum GN=gtaN PE=4 SV=1
Length = 953

Score = 30.0 bits (66), Expect = 6.5
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = +2

Query: 242 PWNPSSCPLHVTCAPRASVCSEPCVVRAIPSSNSHTSASGLSISMND*IMAESSTLKSSI 421
P +PS+ P+ ++ P ASV +P + SS++H S I+ I + S ++
Sbjct: 126 PGSPSASPIPISSIPTASVYRQPF---SSSSSSNHDQGSYPIINTKSIIPSASQLQSQNL 182

Query: 422 SVIVSTND 445
++I S N+
Sbjct: 183 NIINSINN 190


>sp|Q6NI74|GLMU_CORDI Bifunctional protein glmU OS=Corynebacterium
diphtheriae GN=glmU PE=3 SV=1
Length = 484

Score = 30.0 bits (66), Expect = 6.5
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = -2

Query: 393 AMIQSFMDMLRPEADVCELELGIALTTQGSEQTDALGAHVTCNGHE-DGFHGLEFVCQGD 217
A+I + +RPE + + ++ EQ + G V C HE +GF G V GD
Sbjct: 54 AVIGHRREQVRPEVEAVAATVDCEISVAIQEQQNGTGHAVQCAMHELEGFEGTVVVTNGD 113


>sp|P70323|TBX1_MOUSE T-box transcription factor TBX1 OS=Mus
musculus GN=Tbx1 PE=2 SV=2
Length = 479

Score = 29.6 bits (65), Expect = 8.3
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3

Query: 243 HGIHPRVHCMSHAHQEHLSVLNP 311
HG HP H +H H H +NP
Sbjct: 429 HGYHPHAHPHAHPHHHHHPAVNP 451


>sp|Q8D2L3|FUMC_WIGBR Fumarate hydratase class II OS=Wigglesworthia
glossinidia brevipalpis GN=fumC PE=3 SV=1
Length = 464

Score = 29.6 bits (65), Expect = 8.4
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +2

Query: 365 SISMND*IMAESSTLKS-SISVIVSTNDMPWCTTGSTC 475
S+S D I+ STLK+ SIS++ +ND+ W ++G C
Sbjct: 267 SLSTCDAIVKVHSTLKNLSISIMKISNDIRWLSSGPRC 304


tr_hit_id Q5KDH4
Definition tr|Q5KDH4|Q5KDH4_CRYNE Putative uncharacterized protein OS=Cryptococcus neoformans
Align length 44
Score (bit) 39.3
E-value 0.11
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919006|Adiantum capillus-veneris mRNA, clone:
YMU001_000120_A08.
(505 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q5KDH4|Q5KDH4_CRYNE Putative uncharacterized protein OS=Crypt... 39 0.11
tr|Q55PY8|Q55PY8_CRYNE Putative uncharacterized protein OS=Crypt... 39 0.11
tr|A4QTC8|A4QTC8_MAGGR Putative uncharacterized protein OS=Magna... 35 1.6
tr|A9RFP6|A9RFP6_PHYPA Predicted protein OS=Physcomitrella paten... 35 2.1
tr|B6KIX7|B6KIX7_TOXGO Ribonuclease II RNB family protein OS=Tox... 34 4.6
tr|A4HM87|A4HM87_LEIBR Proteophosphoglycan ppg4 OS=Leishmania br... 34 4.6
tr|A8J718|A8J718_CHLRE Magnesium chelatase subunit H (Fragment) ... 33 7.6
tr|Q22ZG0|Q22ZG0_TETTH Putative uncharacterized protein OS=Tetra... 33 7.8
tr|Q2HG84|Q2HG84_CHAGB Putative uncharacterized protein OS=Chaet... 33 7.8

>tr|Q5KDH4|Q5KDH4_CRYNE Putative uncharacterized protein
OS=Cryptococcus neoformans GN=CNG03970 PE=4 SV=1
Length = 346

Score = 39.3 bits (90), Expect = 0.11
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 10/44 (22%)
Frame = +3

Query: 222 PDTRTPI---HGIHPRVHCMSHAH-------QEHLSVLNPVW*E 323
P+T+ PI HG +VHCM H H QE +S LNP+W E
Sbjct: 140 PNTKPPILELHGTLAKVHCMKHRHEQSRDEYQEQISRLNPIWDE 183


>tr|Q55PY8|Q55PY8_CRYNE Putative uncharacterized protein
OS=Cryptococcus neoformans GN=CNBG0760 PE=4 SV=1
Length = 361

Score = 39.3 bits (90), Expect = 0.11
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 10/44 (22%)
Frame = +3

Query: 222 PDTRTPI---HGIHPRVHCMSHAH-------QEHLSVLNPVW*E 323
P+T+ PI HG +VHCM H H QE +S LNP+W E
Sbjct: 147 PNTKPPILELHGTLAKVHCMKHRHEQSRDEYQEQISRLNPIWDE 190


>tr|A4QTC8|A4QTC8_MAGGR Putative uncharacterized protein
OS=Magnaporthe grisea GN=MGG_12939 PE=4 SV=1
Length = 593

Score = 35.4 bits (80), Expect = 1.6
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 11/86 (12%)
Frame = +2

Query: 260 CPLHVTCAPRASVCSEPC------VVRAIPSSNSHTSASGLSISMND*IMAESSTLKSSI 421
C +H C S C + C V + SS+S TSAS S+S ++SST S+I
Sbjct: 430 CSVHGWCGSTDSYCGDGCQPVPLSVASSSVSSSSSTSASPTSVSTTSASSSQSSTSTSTI 489

Query: 422 -----SVIVSTNDMPWCTTGSTCSQT 484
S I ST+ T+ S S T
Sbjct: 490 VPLDTSSIDSTSTSASSTSASVSSST 515


>tr|A9RFP6|A9RFP6_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_65494 PE=4 SV=1
Length = 597

Score = 35.0 bits (79), Expect = 2.1
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2

Query: 245 WNPSSCPLHVTCAPRASVCSEPCVVRAIPSSNS 343
W P++C + VTC PR+ C C+VR +P S S
Sbjct: 540 WVPNACDVIVTCTPRSCAC---CIVRHLPISLS 569


>tr|B6KIX7|B6KIX7_TOXGO Ribonuclease II RNB family protein
OS=Toxoplasma gondii ME49 GN=TGME49_002720 PE=4 SV=1
Length = 1882

Score = 33.9 bits (76), Expect = 4.6
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +2

Query: 236 SNPWNPSSCPLHVTCAPRASVCSEPCVVRAIPSSNSHTSASG 361
S P +PSS P HV+ +P + S P +V A SS+S +S SG
Sbjct: 63 SEPHSPSSLPCHVSLSPE-NASSAPSLVSASSSSSSASSDSG 103


>tr|A4HM87|A4HM87_LEIBR Proteophosphoglycan ppg4 OS=Leishmania
braziliensis GN=LbrM34_V2.0540 PE=4 SV=1
Length = 5384

Score = 33.9 bits (76), Expect = 4.6
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Frame = +2

Query: 218 SP*HTNSNPWNPSSCPLHVTCAPRASVCSEPCVVRAIPSSNSH---TSASGLSISMND*I 388
+P ++S P + SS P +CAP +S S P + PSS+S +S+S S +
Sbjct: 4802 APSSSSSAPSSSSSAPSSSSCAPSSSSSSAPSSSSSAPSSSSSSAPSSSSSAPSSSSSSA 4861

Query: 389 MAESSTLKSSISVIVSTNDMPWCTTGSTCSQTRALC 496
+ SS+ SS S ++ ++ S+ + + + C
Sbjct: 4862 PSSSSSAPSSSSSSAPSSSSSAPSSSSSSAPSSSSC 4897


>tr|A8J718|A8J718_CHLRE Magnesium chelatase subunit H (Fragment)
OS=Chlamydomonas reinhardtii GN=CHLH2 PE=4 SV=1
Length = 1253

Score = 33.1 bits (74), Expect = 7.6
Identities = 17/41 (41%), Positives = 18/41 (43%)
Frame = +3

Query: 159 QCLPI*PSQSNLAHNSTHRNHPDTRTPIHGIHPRVHCMSHA 281
QC P S H TH H T T H HPR H +HA
Sbjct: 496 QCRNSFPEMSTHTHTHTH-THTHTHTHTHTRHPRTHTHTHA 535


>tr|Q22ZG0|Q22ZG0_TETTH Putative uncharacterized protein
OS=Tetrahymena thermophila SB210 GN=TTHERM_01097970 PE=4
SV=1
Length = 1094

Score = 33.1 bits (74), Expect = 7.8
Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 13/130 (10%)
Frame = +2

Query: 140 NADAILAMSANLTISVKFGS*LHS*KSP*HTNSNPWNPSSCPLHVTCAPRASVCSEPCVV 319
N+ IL + N T+ V + S ++P N WN + C L P AS+ + C+V
Sbjct: 291 NSTQILFANYNGTVCVASSASCGSSRAP-----NTWNDADCALCNPSTPVASIDNSTCIV 345

Query: 320 RAIPSSNSHTSASGL-------------SISMND*IMAESSTLKSSISVIVSTNDMPWCT 460
I N+ + SGL S + N+ +++ S+ V + N
Sbjct: 346 --ITQQNNCNATSGLTDAICASCYQQFNSTNSNNNSTNANNSTNSNEPVFANQNGTACVA 403

Query: 461 TGSTCSQTRA 490
+ ++C RA
Sbjct: 404 SSASCGSNRA 413


>tr|Q2HG84|Q2HG84_CHAGB Putative uncharacterized protein
OS=Chaetomium globosum GN=CHGG_00770 PE=4 SV=1
Length = 586

Score = 33.1 bits (74), Expect = 7.8
Identities = 18/72 (25%), Positives = 33/72 (45%)
Frame = +2

Query: 248 NPSSCPLHVTCAPRASVCSEPCVVRAIPSSNSHTSASGLSISMND*IMAESSTLKSSISV 427
NP+ C + C P +C+ S+ S T++S S + + + SST K++ +
Sbjct: 271 NPADCYVERGCQPAFGICASNSNSTTTSSATSGTTSSATSTTSSTKTTSSSSTTKTTSTS 330

Query: 428 IVSTNDMPWCTT 463
++ P TT
Sbjct: 331 TTPSSSTPGTTT 342