BP919008
Clone id YMU001_000120_A11
Library
Length 498
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000120_A11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CGGACGAAAACTTCAAAATGTGAAGTCTGCATGTCTGCTATACCACTAAAAAATATATCT
AGAGAGTCGAGGATAAGCCCAGATTCACCTTTAGAGGGAAGTTCAAGGTATACTAATGGT
AGTCACCCACAAGACAATATAGCCATCAGCTCCATCATGCATAGTATTGACTAAACCATG
AATTAAAATCCTGCATCCATGAGAATAAAATCGTCCTCAATACCCAATATTGAGAATGGC
AAAAAGTTCCCACTCACCCTCCACATAAAGCCAAGTGAGGTCATAGAGATAAAGACTCCA
ATACAGACCAATTCCCCCACTAAAGGATCAAACTACTGAGAAAGTGACAGATCCCAAATG
AACCTTTCTGCCTCCGACATAGTTAACTACCTCATCATCCCAAGGATGATCATGTAAACA
TGAACATAACCATCCTATAGCTCCAAATCCATGGAAGCTAGGACCTTGTTGCGGTAAACA
CTGTGAAAAGAACATGTC
■■Homology search results ■■ -
sp_hit_id P30805
Definition sp|P30805|LALBA_ORNAN Alpha-lactalbumin OS=Ornithorhynchus anatinus
Align length 44
Score (bit) 33.9
E-value 0.43
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919008|Adiantum capillus-veneris mRNA, clone:
YMU001_000120_A11.
(498 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P30805|LALBA_ORNAN Alpha-lactalbumin OS=Ornithorhynchus anati... 34 0.43
sp|Q31D45|FABH_PROM9 3-oxoacyl-[acyl-carrier-protein] synthase 3... 30 4.7
sp|Q5BL44|S20A1_XENTR Sodium-dependent phosphate transporter 1 O... 30 4.8
sp|Q68F35|S20AA_XENLA Sodium-dependent phosphate transporter 1-A... 30 8.2
sp|Q5JE31|RPOH_PYRKO DNA-directed RNA polymerase subunit H OS=Py... 30 8.2
sp|P81646|LALBA_TACAC Alpha-lactalbumin OS=Tachyglossus aculeatu... 30 8.2

>sp|P30805|LALBA_ORNAN Alpha-lactalbumin OS=Ornithorhynchus anatinus
GN=LALBA PE=1 SV=1
Length = 126

Score = 33.9 bits (76), Expect = 0.43
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -1

Query: 486 SQCLPQQG-PSFHGFGAIGWLCSCLHDHPWDDEVVNYVGGRKVH 358
S+ L + G FHG WLC H+ +D + +NY G H
Sbjct: 9 SRVLKENGLGGFHGVSLEEWLCVIFHESGYDSQALNYYNGSSSH 52


>sp|Q31D45|FABH_PROM9 3-oxoacyl-[acyl-carrier-protein] synthase 3
OS=Prochlorococcus marinus (strain MIT 9312) GN=fabH
PE=3 SV=1
Length = 335

Score = 30.4 bits (67), Expect = 4.7
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -2

Query: 110 YLELPSKGESGLILDSLDIFFSGIADMQTSHFEVF 6
+L LPSK LI+D++D G + +Q + EV+
Sbjct: 196 FLNLPSKNNKDLIIDNIDFLNGGFSPIQMNGQEVY 230


>sp|Q5BL44|S20A1_XENTR Sodium-dependent phosphate transporter 1
OS=Xenopus tropicalis GN=slc20a1 PE=2 SV=1
Length = 685

Score = 30.4 bits (67), Expect = 4.8
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1

Query: 1 RTKTSKCEVCMSAIPLKNI-SRESRISPDSPLEGSSRYTNGSHPQDNIAISSIMHS 165
RT T K C A+ + + S E+ I D P+ GS + NG+H Q + +S+ M+S
Sbjct: 323 RTVTFKMGDCDDAVEKEKLNSMETNI--DQPMNGSVQLPNGNHVQFSQTVSNQMNS 376


>sp|Q68F35|S20AA_XENLA Sodium-dependent phosphate transporter 1-A
OS=Xenopus laevis GN=slc20a1-A PE=2 SV=1
Length = 685

Score = 29.6 bits (65), Expect = 8.2
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1

Query: 1 RTKTSKCEVCMSAIPLKNI-SRESRISPDSPLEGSSRYTNGSHPQDNIAISSIMHS 165
RT T K C I + + S E+ I D P GS + NG+H Q + A+S+ M+S
Sbjct: 323 RTVTFKMGECDDPIEKEKLNSMETNI--DQPTNGSVQLPNGNHVQFSQAVSNQMNS 376


>sp|Q5JE31|RPOH_PYRKO DNA-directed RNA polymerase subunit H
OS=Pyrococcus kodakaraensis GN=rpoH PE=3 SV=1
Length = 82

Score = 29.6 bits (65), Expect = 8.2
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +1

Query: 202 RIKSSSIPNIENGKKFPLTLHIKPSEVIEIKTPIQTNSPTKGSNY 336
RI+ S +P I+ + L KP +VIEIK SPT G Y
Sbjct: 34 RIRISQLPQIKASDPAVVALGAKPGDVIEIK----RKSPTAGYYY 74


>sp|P81646|LALBA_TACAC Alpha-lactalbumin OS=Tachyglossus aculeatus
aculeatus GN=LALBA PE=1 SV=1
Length = 126

Score = 29.6 bits (65), Expect = 8.2
Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = -1

Query: 486 SQCLPQQG-PSFHGFGAIGWLCSCLHDHPWDDEVVNYVGGRKVH 358
SQ L G F G W+C H+ +D +NY G H
Sbjct: 9 SQMLKANGLDGFQGITLEEWICIAFHESGFDSRALNYYNGSSSH 52


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919008|Adiantum capillus-veneris mRNA, clone:
YMU001_000120_A11.
(498 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******