BP919018 |
Clone id |
YMU001_000120_B09 |
Library |
YMU01 |
Length |
514 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000120_B09. |
Accession |
BP919018 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1940Contig1 |
Sequence |
GCTCCACATTTGACACACCATTGTGGTGCACAGTTGATTTGTCCAAATATCGACGTGACT GTTGCTTTTCAACGCTTTCCTCCTTCCTTCCTTTTCTGCTTCTAGTATTTTCATCCTTGG GGCTGAACACGGGAATTAGAGGATGGCTACCTAATAGAGGCTCACTTGAGGACGAATGAA GCGGGACTTCGCCCCCATTAACAAGCATGGCATAGTAGCGTGCCAGTGCTCGAGCTGAAA AATGGCCATTTGCTGCAGGTATTACTGCTCTTCTTATGAATAACATGTTGAAGAGGACAG GCATTGCAGCTATAACAGAGAAAAAGTCTTCAGCTGCATTTTCACCTAGTATTGCACTCA CATTCGCATGATTTTGTGTCCCACCATCGCCTATCCCATTCTTGAATAAGCTTTTTGCGC TCTCAAATTCAGCCATATCAAGAGTGAGTGATGCCAGACGGGATTCCACGCCAGGAGGAA TGCCTACATAGAACTCCCCATCCACACCAAGTTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A1WLD5 |
Definition |
sp|A1WLD5|UVRC_VEREI UvrABC system protein C OS=Verminephrobacter eiseniae (strain EF01-2) |
Align length |
84 |
Score (bit) |
36.6 |
E-value |
0.071 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SIA0 |
Definition |
tr|A9SIA0|A9SIA0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
150 |
Score (bit) |
129.0 |
E-value |
9.0e-29 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919018|Adiantum capillus-veneris mRNA, clone: YMU001_000120_B09. (514 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SIA0|A9SIA0_PHYPA Predicted protein OS=Physcomitrella paten... 129 9e-29 tr|Q93YN5|Q93YN5_ARATH Putative uncharacterized protein AT5g2481... 127 4e-28 tr|Q94AD6|Q94AD6_ARATH AT5g24810/F6A4_20 OS=Arabidopsis thaliana... 120 5e-26 tr|A9SM18|A9SM18_PHYPA Predicted protein OS=Physcomitrella paten... 119 9e-26 tr|B8B250|B8B250_ORYSI Putative uncharacterized protein OS=Oryza... 111 2e-23 tr|A3BF43|A3BF43_ORYSJ Putative uncharacterized protein OS=Oryza... 108 1e-22 tr|A7P510|A7P510_VITVI Chromosome chr4 scaffold_6, whole genome ... 65 2e-09 tr|A9UTH3|A9UTH3_MONBE Predicted protein OS=Monosiga brevicollis... 54 5e-06 tr|A5V372|A5V372_SPHWW Beta-lactamase OS=Sphingomonas wittichii ... 48 3e-04 tr|A9FAU1|A9FAU1_SORC5 Carboxylesterase OS=Sorangium cellulosum ... 45 0.002 tr|Q5V0W6|Q5V0W6_HALMA Putative uncharacterized protein OS=Haloa... 44 0.006 tr|A0QHR9|A0QHR9_MYCA1 Beta-lactamase OS=Mycobacterium avium (st... 42 0.014 tr|Q6GVQ7|Q6GVQ7_MYCAV Esterase OS=Mycobacterium avium GN=lipL P... 42 0.014 tr|Q740W4|Q740W4_MYCPA LipL OS=Mycobacterium paratuberculosis GN... 42 0.018 tr|Q0S452|Q0S452_RHOSR Possible beta-lactamase OS=Rhodococcus sp... 42 0.018 tr|Q0S6E5|Q0S6E5_RHOSR Putative uncharacterized protein OS=Rhodo... 41 0.031 tr|B2HTM5|B2HTM5_ACIBC Beta-lactamase class C OS=Acinetobacter b... 41 0.040 tr|B0VRL7|B0VRL7_ACIBS Putative uncharacterized protein OS=Acine... 41 0.040 tr|B0V735|B0V735_ACIBY Putative uncharacterized protein OS=Acine... 41 0.040 tr|A3M6E2|A3M6E2_ACIBT Putative esterase OS=Acinetobacter bauman... 41 0.040 tr|B7IAI1|B7IAI1_ACIBA Beta-lactamase OS=Acinetobacter baumannii... 41 0.040 tr|B7H1A6|B7H1A6_ACIBA Beta-lactamase family protein OS=Acinetob... 41 0.040 tr|B1KCP8|B1KCP8_BURCC Beta-lactamase OS=Burkholderia cenocepaci... 40 0.089 tr|B5WCD7|B5WCD7_9BURK Beta-lactamase OS=Burkholderia sp. H160 G... 40 0.089 tr|B2HPF0|B2HPF0_MYCMM Conserved hypothetical esterase LipL OS=M... 39 0.15 tr|Q4IW88|Q4IW88_AZOVI Beta-lactamase OS=Azotobacter vinelandii ... 39 0.15 tr|Q7TZZ1|Q7TZZ1_MYCBO PROBABLE ESTERASE LIPL OS=Mycobacterium b... 39 0.20 tr|P71778|P71778_MYCTU PROBABLE ESTERASE LIPL OS=Mycobacterium t... 39 0.20 tr|B3PCW6|B3PCW6_CELJU Beta-lactamase OS=Cellvibrio japonicus (s... 39 0.20 tr|B0T1Y0|B0T1Y0_CAUSK Beta-lactamase OS=Caulobacter sp. (strain... 39 0.20
>tr|A9SIA0|A9SIA0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_185235 PE=4 SV=1 Length = 936
Score = 129 bits (324), Expect = 9e-29 Identities = 75/150 (50%), Positives = 95/150 (63%) Frame = -1
Query: 511 LGVDGEFYVGIPPGVESRLASLTLDMAEFESAKSLFKNGIGDGGTQNHANVSAILGENAA 332 +G+ GEFY+G+P G+E RLASL+LD E ++ K + + QN + GE+ Sbjct: 661 IGLAGEFYIGVPAGIEDRLASLSLDTEEVKTMKEM---AMKQATPQNSLD-----GEDG- 711
Query: 331 EDFFSVIAAMPVLFNMLFIRRAVIPAANGHFSARALARYYAMLVNGGEVPLHSSSSEPLL 152 D S I A+PVLFN LF+RRA+IPAANGHFSARALARYYA L G VP SSSSEP L Sbjct: 712 -DGMSTITALPVLFNTLFVRRAIIPAANGHFSARALARYYATLATAGAVPSASSSSEPRL 770
Query: 151 GSHPLIPVFSPKDENTRSRKGRKEESVEKQ 62 GSHP P+ D KG K++ ++ Q Sbjct: 771 GSHPQKPLEKKLDP---LGKGSKKDGMKHQ 797
>tr|Q93YN5|Q93YN5_ARATH Putative uncharacterized protein AT5g24810;F6A4.20 (At5g24810/F6A4.20) OS=Arabidopsis thaliana GN=AT5g24810;F6A4.20 PE=2 SV=1 Length = 1009
Score = 127 bits (318), Expect = 4e-28 Identities = 70/159 (44%), Positives = 96/159 (60%), Gaps = 1/159 (0%) Frame = -1
Query: 511 LGVDGEFYVGIPPGVESRLASLTLDMAEFESAKSLFKNGIGDGGTQNHANVSAILGENAA 332 L +DGE Y+GIPPGVESRLA+LT D E S+ A+ + Sbjct: 704 LNIDGELYIGIPPGVESRLATLTFDTDEMSKLSSI-------------ASQPELPSTFQP 750
Query: 331 EDFFSVIAAMPVLFNMLFIRRAVIPAANGHFSARALARYYAMLVNGGEV-PLHSSSSEPL 155 + + +PVLFN L +RRA+IPAANGH SARALARYYA L +GG V P HSS S+P Sbjct: 751 DKIIQMATNLPVLFNTLNVRRAIIPAANGHCSARALARYYATLADGGLVPPPHSSLSQPP 810
Query: 154 LGSHPLIPVFSPKDENTRSRKGRKEESVEKQQSRRYLDK 38 LGSH +P F+ + T+ +KG++ + EK +S+ + ++ Sbjct: 811 LGSHTHVPKFTSLKDTTKKKKGKEMAATEKGKSKDHQER 849
>tr|Q94AD6|Q94AD6_ARATH AT5g24810/F6A4_20 OS=Arabidopsis thaliana PE=2 SV=1 Length = 690
Score = 120 bits (300), Expect = 5e-26 Identities = 68/159 (42%), Positives = 94/159 (59%), Gaps = 1/159 (0%) Frame = -1
Query: 511 LGVDGEFYVGIPPGVESRLASLTLDMAEFESAKSLFKNGIGDGGTQNHANVSAILGENAA 332 L +D E Y+GI PGVESRLA+LT D E S+ A+ + Sbjct: 474 LNIDVELYIGIHPGVESRLATLTFDTDEMSKLSSI-------------ASQPELPSTFQP 520
Query: 331 EDFFSVIAAMPVLFNMLFIRRAVIPAANGHFSARALARYYAMLVNGGEV-PLHSSSSEPL 155 + + +PVLFN L +RRA+IPAANGH SARALARYYA L +GG V P HSS S+P Sbjct: 521 DKIIQMATNLPVLFNTLNVRRAIIPAANGHCSARALARYYATLADGGLVPPPHSSLSQPP 580
Query: 154 LGSHPLIPVFSPKDENTRSRKGRKEESVEKQQSRRYLDK 38 LGSH +P F+ + T+ +KG++ + EK +S+ + ++ Sbjct: 581 LGSHTHVPKFTSLKDTTKKKKGKEMAATEKGKSKDHQER 619
>tr|A9SM18|A9SM18_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_165653 PE=4 SV=1 Length = 962
Score = 119 bits (298), Expect = 9e-26 Identities = 75/176 (42%), Positives = 95/176 (53%), Gaps = 14/176 (7%) Frame = -1
Query: 511 LGVDGEFYVGIPPGVESRLASLTLDMAEFESAKSLFKNGIGDGGTQNHANVSAILGENA- 335 +G++GEFYVGIP GVE RLA+L+LD E ++ K + + N + + + Sbjct: 662 IGLNGEFYVGIPAGVEDRLATLSLDTEEVKTMKEAIEKQQAAQSLKFLINPAERFSKPSE 721
Query: 334 -------------AEDFFSVIAAMPVLFNMLFIRRAVIPAANGHFSARALARYYAMLVNG 194 ED S I A+PVLFN LF+RRA++PAANGHFSARALARYYA L G Sbjct: 722 TMMKSTTPQSSFGGEDGMSTITALPVLFNTLFVRRAIVPAANGHFSARALARYYATLCTG 781
Query: 193 GEVPLHSSSSEPLLGSHPLIPVFSPKDENTRSRKGRKEESVEKQQSRRYLDKSTVH 26 G VP S SSEP L HP P E KG K+ +K D++T H Sbjct: 782 GIVPPASLSSEPPLSRHPHKPF-----EKKSVAKGNKKNGTKKP------DRNTRH 826
>tr|B8B250|B8B250_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_24357 PE=4 SV=1 Length = 926
Score = 111 bits (277), Expect = 2e-23 Identities = 71/147 (48%), Positives = 86/147 (58%), Gaps = 2/147 (1%) Frame = -1
Query: 511 LGVDGEFYVGIPPGVESRLASLTLDMAEFESAKSLFKNGIGDGGTQNHANVSAILGENAA 332 L + GE Y+GIPPGVESRLA+LT+DM E E F+ G +V L N A Sbjct: 635 LHIKGELYIGIPPGVESRLAALTVDMEELEKLSG-FRAG---------PDVPQELLSNVA 684
Query: 331 EDFFSVIAAMPVLFNMLFIRRAVIPAANGHFSARALARYYAMLVNGGEV-PLHSS-SSEP 158 + + +PVLFN L IRRA++PAANGH SARALARYYA L GG + P HSS SEP Sbjct: 685 Q----MATGLPVLFNTLNIRRAILPAANGHCSARALARYYAALGAGGAIPPPHSSGGSEP 740
Query: 157 LLGSHPLIPVFSPKDENTRSRKGRKEE 77 LGSH P F + + G K + Sbjct: 741 PLGSHVHTPKFPTMPSKKKKKGGSKND 767
>tr|A3BF43|A3BF43_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_021665 PE=4 SV=1 Length = 895
Score = 108 bits (271), Expect = 1e-22 Identities = 69/147 (46%), Positives = 86/147 (58%), Gaps = 2/147 (1%) Frame = -1
Query: 511 LGVDGEFYVGIPPGVESRLASLTLDMAEFESAKSLFKNGIGDGGTQNHANVSAILGENAA 332 L ++GE Y+GIPPGVESRLA+LT+DM E E F+ G +V L N A Sbjct: 604 LHINGELYIGIPPGVESRLAALTVDMEELEKLSG-FRAG---------PDVPQELLSNVA 653
Query: 331 EDFFSVIAAMPVLFNMLFIRRAVIPAANGHFSARALARYYAMLVNGGEV-PLHS-SSSEP 158 + + +PVLFN L IRRA++PAANGH SARALARYYA L GG + P HS S+P Sbjct: 654 Q----MATGLPVLFNTLNIRRAILPAANGHCSARALARYYAALGAGGAIPPPHSGGGSKP 709
Query: 157 LLGSHPLIPVFSPKDENTRSRKGRKEE 77 LGSH P F + + G K + Sbjct: 710 PLGSHVHTPKFPTMPSKKKKKGGSKND 736
>tr|A7P510|A7P510_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032357001 PE=4 SV=1 Length = 859
Score = 65.5 bits (158), Expect = 2e-09 Identities = 32/53 (60%), Positives = 42/53 (79%), Gaps = 1/53 (1%) Frame = -1
Query: 316 VIAAMPVLFNMLFIRRAVIPAANGHFSARALARYYAMLVNGGEV-PLHSSSSE 161 ++ +P LFN L IRR++IP+ANGH SARALARYYA L +GG + P HS+S+E Sbjct: 679 LVTVLPALFNTLNIRRSIIPSANGHCSARALARYYATLADGGILPPPHSTSTE 731
>tr|A9UTH3|A9UTH3_MONBE Predicted protein OS=Monosiga brevicollis GN=36162 PE=4 SV=1 Length = 557
Score = 53.9 bits (128), Expect = 5e-06 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 2/93 (2%) Frame = -1
Query: 457 LASLTLDMAEFESAKSL-FKNGIGDGGTQNHANVSAILGENAAE-DFFSVIAAMPVLFNM 284 LA D ++FE L D AN ++ ++ D ++ A P ++N Sbjct: 361 LAPANGDASDFEPEGGLSMPEARSDAQALEAANTMEAEADSTSDFDLSRLLTADPCIYNA 420
Query: 283 LFIRRAVIPAANGHFSARALARYYAMLVNGGEV 185 +RRA IP+ANGHFSARA+A++YA LV GEV Sbjct: 421 PMVRRACIPSANGHFSARAVAKFYASLV--GEV 451
>tr|A5V372|A5V372_SPHWW Beta-lactamase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=Swit_0367 PE=4 SV=1 Length = 380
Score = 47.8 bits (112), Expect = 3e-04 Identities = 34/104 (32%), Positives = 51/104 (49%) Frame = -1
Query: 496 EFYVGIPPGVESRLASLTLDMAEFESAKSLFKNGIGDGGTQNHANVSAILGENAAEDFFS 317 + + GIP VE+R+A L A +++ + DG A Sbjct: 192 DLWFGIPAEVEARIARL--------DAVAVYV--MPDGNAMREAQPL------------- 228
Query: 316 VIAAMPVLFNMLFIRRAVIPAANGHFSARALARYYAMLVNGGEV 185 V+ MP F ++RRA IPA G F+AR+ AR++AML NGG++ Sbjct: 229 VVDLMPDPFERPYVRRACIPAVGGIFNARSEARFWAMLANGGQL 272
>tr|A9FAU1|A9FAU1_SORC5 Carboxylesterase OS=Sorangium cellulosum (strain So ce56) GN=sce7772 PE=4 SV=1 Length = 388
Score = 45.1 bits (105), Expect = 0.002 Identities = 23/37 (62%), Positives = 24/37 (64%) Frame = -1
Query: 301 PVLFNMLFIRRAVIPAANGHFSARALARYYAMLVNGG 191 P L N RRA IPA NGH +ARALAR Y L NGG Sbjct: 248 PGLVNAARARRAEIPALNGHANARALARMYGALANGG 284
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