BP919028
Clone id YMU001_000120_C08
Library
Length 309
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000120_C08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CCCTCGTTTTTCCTAATCTCCTTTCCCTTGTCAACCTTCTGTTTCCACTCCAATCTCCTC
CTTTGTCGAAGCTAAGTCCGAGAGAGAGATTTTCCCTTTTGCTTTACTTAGTCAAGAGAG
AGCAAGAGAGAGATTGGAGCCGAGACCGTTCCTTCACCTCCCTTTATCTTCGTTCACCTT
CCCTCCTTTGTGCCTCCTCTCTCCAAGAGAGAAAGAGAGAGAGTGAGTATGGAGCTGAGC
TCCCGTCCACTGCTTGCCCCCACGACCTCCTTCTCTTGCCACGCTTCCTCCCCTGCTCCT
TGAATCCCT
■■Homology search results ■■ -
sp_hit_id Q60698
Definition sp|Q60698|SKI_MOUSE Ski oncogene OS=Mus musculus
Align length 34
Score (bit) 29.3
E-value 6.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919028|Adiantum capillus-veneris mRNA, clone:
YMU001_000120_C08.
(309 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q60698|SKI_MOUSE Ski oncogene OS=Mus musculus GN=Ski PE=2 SV=2 29 6.4
sp|Q1LZE2|CL032_BOVIN Uncharacterized protein C12orf32 homolog O... 29 6.4
sp|O97758|ZO1_CANFA Tight junction protein ZO-1 OS=Canis familia... 29 6.4
sp|Q9Y9H2|TRPB2_AERPE Tryptophan synthase beta chain 2 OS=Aeropy... 29 6.4
sp|Q32N32|CASC4_XENLA Protein casc4 OS=Xenopus laevis GN=casc4 P... 29 6.4
sp|Q8C428|TMC7_MOUSE Transmembrane channel-like protein 7 OS=Mus... 29 8.3
sp|Q5HZA1|PHR4A_XENLA Phosphatase and actin regulator 4-A OS=Xen... 29 8.4

>sp|Q60698|SKI_MOUSE Ski oncogene OS=Mus musculus GN=Ski PE=2 SV=2
Length = 725

Score = 29.3 bits (64), Expect = 6.4
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 6/34 (17%)
Frame = +1

Query: 115 RESKREIGAETVPSP------PFIFVHLPSFVPP 198
+ES +E GA TVP+P P +HLP+ PP
Sbjct: 47 KESAKEAGAATVPAPVPTAAEPPPVLHLPAIQPP 80


>sp|Q1LZE2|CL032_BOVIN Uncharacterized protein C12orf32 homolog
OS=Bos taurus PE=2 SV=1
Length = 241

Score = 29.3 bits (64), Expect = 6.4
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = +1

Query: 112 SRESKREIGAETVPSPPFIFVHLPSFVPPLSKRERERVSMELSSRPLLAPTTSFSCHASS 291
S +S RE+ A T P P +F+ P P S + E + EL L S S H S+
Sbjct: 137 SPQSCRELSAHTFPDFPCVFIP-PDIQTPESPGQGEPIPSELRENSL----PSCSLHTST 191

Query: 292 P 294
P
Sbjct: 192 P 192


>sp|O97758|ZO1_CANFA Tight junction protein ZO-1 OS=Canis familiaris
GN=TJP1 PE=1 SV=1
Length = 1769

Score = 29.3 bits (64), Expect = 6.4
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 12/59 (20%)
Frame = +3

Query: 108 LVKREQERDWSRDRSFT---SLYLRSPSLLCASS---------LQERKRESEYGAELPS 248
LV R E+ W+RDRS + SL RS ASS L + ++ EYG L S
Sbjct: 145 LVSRRSEKSWARDRSASRERSLSPRSDRRSVASSQPPKPTKVTLVKSRKNEEYGLRLAS 203


>sp|Q9Y9H2|TRPB2_AERPE Tryptophan synthase beta chain 2 OS=Aeropyrum
pernix GN=trpB2 PE=3 SV=1
Length = 449

Score = 29.3 bits (64), Expect = 6.4
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +2

Query: 20 PFPCQPSVSTPISSFVEAKSEREIFPFALLSQERARER-LEPRPFLHLPLSSFTFPPLCL 196
P P P P+ AK +FP AL+ QE +RER +E +H SF P L
Sbjct: 31 PPPLNPKTGEPVDPSALAK----LFPKALIEQEVSRERYIEIPGEVHEAYISFARRPTPL 86

Query: 197 LSPREKER 220
L ER
Sbjct: 87 LRAVNLER 94


>sp|Q32N32|CASC4_XENLA Protein casc4 OS=Xenopus laevis GN=casc4 PE=2
SV=1
Length = 385

Score = 29.3 bits (64), Expect = 6.4
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3

Query: 105 YLVKREQERDWSRDRSFTSLYLRSPSLLCASSLQERKRESE 227
+L + +Q ++ + +F L+ S CA L ERKRE E
Sbjct: 137 FLRQEDQLHEYKNNNTFLQKSLQEESQQCAQQLAERKREYE 177


>sp|Q8C428|TMC7_MOUSE Transmembrane channel-like protein 7 OS=Mus
musculus GN=Tmc7 PE=2 SV=1
Length = 726

Score = 28.9 bits (63), Expect = 8.3
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1

Query: 154 SPPFIFVH-LPSFVPPLSKRERERVSMELSSRPLLAPTTSFSC 279
SPP F+ LPS+ +++R +S + S LL PT SFSC
Sbjct: 32 SPPVNFLQELPSY-RSVARRRTNILSRDKQSGTLLKPTDSFSC 73


>sp|Q5HZA1|PHR4A_XENLA Phosphatase and actin regulator 4-A
OS=Xenopus laevis GN=phactr4-A PE=2 SV=1
Length = 694

Score = 28.9 bits (63), Expect = 8.4
Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 6/81 (7%)
Frame = +2

Query: 26 PCQPSVSTPISSFVEAKSEREIFPFALLSQERARERLEPRP-----FLHLPLSSFTFPPL 190
P P + P S+ E + P A L A E + P P H+P+S+ PPL
Sbjct: 321 PLPPKRAMPPSTDAVTNKENALGP-ASLPPTPANEIITPSPPSPPASSHIPVSNPPVPPL 379

Query: 191 CLLSP-REKERE*VWS*APVH 250
L P E E+E S P+H
Sbjct: 380 TLAPPYTEVEKEQSASPIPLH 400


tr_hit_id Q9ZUJ1
Definition tr|Q9ZUJ1|Q9ZUJ1_ARATH T2K10.7 protein OS=Arabidopsis thaliana
Align length 78
Score (bit) 34.3
E-value 3.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919028|Adiantum capillus-veneris mRNA, clone:
YMU001_000120_C08.
(309 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9ZUJ1|Q9ZUJ1_ARATH T2K10.7 protein OS=Arabidopsis thaliana G... 34 3.2
tr|A8PA90|A8PA90_COPC7 Putative uncharacterized protein OS=Copri... 33 7.2
tr|A7SFG4|A7SFG4_NEMVE Predicted protein OS=Nematostella vectens... 33 9.3

>tr|Q9ZUJ1|Q9ZUJ1_ARATH T2K10.7 protein OS=Arabidopsis thaliana
GN=T2K10.7 PE=4 SV=1
Length = 1194

Score = 34.3 bits (77), Expect = 3.2
Identities = 29/78 (37%), Positives = 32/78 (41%), Gaps = 7/78 (8%)
Frame = +1

Query: 82 ERDFPFC------FT*SRESKREIGAETVPSPPFIFVHLPSFVPPLSKRERERVSMEL-S 240
E +PF FT ES TVPSPP FV LPS PP + S S
Sbjct: 703 ENTYPFTKPTLDPFTNLEESNNHSITTTVPSPP--FVQLPSVPPPTRDPHQPPPSQPAPS 760

Query: 241 SRPLLAPTTSFSCHASSP 294
PL P+ S SSP
Sbjct: 761 PSPLSPPSMSSPVMTSSP 778


>tr|A8PA90|A8PA90_COPC7 Putative uncharacterized protein
OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC
9003) GN=CC1G_06124 PE=4 SV=1
Length = 2082

Score = 33.1 bits (74), Expect = 7.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3

Query: 117 REQERDWSRDRSFTSLYLRSPSLLCASSLQERKRESEYGAELP 245
RE++RDW R+R Y RS S + ++R R+ +Y P
Sbjct: 561 RERDRDWDRERDRDRSYRRSRSRSRSRDRRDRSRDRDYDTRSP 603


>tr|A7SFG4|A7SFG4_NEMVE Predicted protein OS=Nematostella vectensis
GN=v1g211464 PE=4 SV=1
Length = 623

Score = 32.7 bits (73), Expect = 9.3
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +1

Query: 148 VPSPPFIFVHLPSFVPPLSKRERERVSMELSSRPLLAPTTSFSCHASSPAP 300
+P P + P +P +++ M+ P APT S SC S PAP
Sbjct: 299 MPQAPMMMPQAPMMMPQAPMTMQQQAQMQQPCAPSCAPTYSPSCCGSYPAP 349