BP919031
Clone id YMU001_000120_C11
Library
Length 277
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000120_C11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AAACCACATAACACATACGCATATGCTGCCCTTTGCATGCCCTTGACTTTCATAACTGCT
TTGCCACTTTAGCATTCACCTATAAACACACATAGCTCTACCTTCCACACTTCATAGCGT
CGACCAACTTTAGTTGCACCATTATTGGCAAAGCCACTTGTTGAACATTTATGTTCAACC
AAAAACATGTTCATCGAGCTTTAGGAACTGCAATGGGTAATGGAATGATAGAATCCAAAC
CCCACTTCTCAAATGCATTTTGAGCTATGATAATCCC
■■Homology search results ■■ -
sp_hit_id P27279
Definition sp|P27279|VNS2_AHSV9 Non-structural protein NS2 OS=African horse sickness virus 9
Align length 24
Score (bit) 30.0
E-value 3.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919031|Adiantum capillus-veneris mRNA, clone:
YMU001_000120_C11.
(277 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P27279|VNS2_AHSV9 Non-structural protein NS2 OS=African horse... 30 3.7

>sp|P27279|VNS2_AHSV9 Non-structural protein NS2 OS=African horse
sickness virus 9 GN=S8 PE=3 SV=1
Length = 365

Score = 30.0 bits (66), Expect = 3.7
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -1

Query: 277 GIIIAQNAFEKWGLDSIIPLPIAV 206
GI + QN +E+W +++ P+P+AV
Sbjct: 85 GIEVTQNRWEEWSFEALTPVPMAV 108


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919031|Adiantum capillus-veneris mRNA, clone:
YMU001_000120_C11.
(277 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******