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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919037
Clone id YMU001_000120_D09
Library
Length 364
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000120_D09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GATGGACAACGGGTTAATATTCCCGTACTGCCCCTTGTTGGTCCCGAGGGACGGAGGAGG
CTAGGTTAGCCGAAAGGTGGTTATCGGTTCAAGGACGCAAAGCTAATAAACCTGAGGGGT
AGAGAAAATGCCTCGAGCCAACGTCCGAGTACTAGGCGCTACGGCGCCGAAGTAACCCAT
GCCACACTCCCAAGAAAAGCTCGAACGACCTTTGACAAGTGGGTACCTGTACCCGAAACC
GACACAGGTGGGTAGGTAGAGAATACCTAGGGGCGCGAGACAACTTTCTCTAGGGAACTC
GGCAAAATGGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACACGGGAGGTCGCAGCG
ACCA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919037|Adiantum capillus-veneris mRNA, clone:
YMU001_000120_D09.
         (364 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done

 ***** No hits found ******
tr_hit_id A4QMC1
Definition tr|A4QMC1|A4QMC1_PINKO ORF61c OS=Pinus koraiensis
Align length 45
Score (bit) 83.6
E-value 5.0e-15
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919037|Adiantum capillus-veneris mRNA, clone:
YMU001_000120_D09.
         (364 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A4QMC1|A4QMC1_PINKO ORF61c OS=Pinus koraiensis PE=4 SV=1            84   5e-15
tr|A6N128|A6N128_ORYSI Putative uncharacterized protein (Fragmen...    66   8e-10
tr|A8STH6|A8STH6_9FIRM Putative uncharacterized protein OS=Copro...    58   3e-07
tr|A8SSN4|A8SSN4_9FIRM Putative uncharacterized protein OS=Copro...    58   3e-07
tr|A6BL01|A6BL01_9FIRM Putative uncharacterized protein OS=Dorea...    57   4e-07
tr|A6BKX8|A6BKX8_9FIRM Putative uncharacterized protein OS=Dorea...    57   4e-07
tr|Q8CM04|Q8CM04_COREF Putative uncharacterized protein OS=Coryn...    55   2e-06
tr|A5Z304|A5Z304_9FIRM Putative uncharacterized protein OS=Eubac...    55   2e-06
tr|A5ZYV3|A5ZYV3_9FIRM Putative uncharacterized protein OS=Rumin...    53   9e-06
tr|B1QFN7|B1QFN7_CLOBO Putative uncharacterized protein OS=Clost...    50   4e-05
tr|Q1MP76|Q1MP76_LAWIP NA OS=Lawsonia intracellularis (strain PH...    49   2e-04
tr|A5KRC0|A5KRC0_9FIRM Putative uncharacterized protein OS=Rumin...    48   2e-04
tr|A5KL04|A5KL04_9FIRM Putative uncharacterized protein OS=Rumin...    48   2e-04
tr|B0MGK0|B0MGK0_9FIRM Putative uncharacterized protein OS=Anaer...    48   2e-04
tr|A5KRI8|A5KRI8_9FIRM Putative uncharacterized protein OS=Rumin...    48   3e-04
tr|A5KRF0|A5KRF0_9FIRM Putative uncharacterized protein OS=Rumin...    48   3e-04
tr|A5KRD2|A5KRD2_9FIRM Putative uncharacterized protein OS=Rumin...    48   3e-04
tr|A5KP23|A5KP23_9FIRM Putative uncharacterized protein OS=Rumin...    48   3e-04
tr|A5KMC2|A5KMC2_9FIRM Putative uncharacterized protein OS=Rumin...    48   3e-04
tr|Q3BKI0|Q3BKI0_9PROT Putative uncharacterized protein OS=Magne...    48   3e-04
tr|B1RTS4|B1RTS4_CLOPE Putative uncharacterized protein OS=Clost...    48   3e-04
tr|A7QEC9|A7QEC9_VITVI Chromosome chr1 scaffold_84, whole genome...    47   4e-04
tr|B6G1S8|B6G1S8_9CLOT Putative uncharacterized protein OS=Clost...    47   5e-04
tr|B1BC33|B1BC33_CLOBO Putative uncharacterized protein OS=Clost...    47   5e-04
tr|Q5ZFQ7|Q5ZFQ7_9CLOT Putative uncharacterized protein OS=Clost...    47   6e-04
tr|A7DZR7|A7DZR7_CLOSP Putative uncharacterized protein OS=Clost...    47   6e-04
tr|A7B6Q1|A7B6Q1_RUMGN Putative uncharacterized protein OS=Rumin...    46   8e-04
tr|A5KRI7|A5KRI7_9FIRM Putative uncharacterized protein OS=Rumin...    46   8e-04
tr|A8SBJ8|A8SBJ8_9FIRM Putative uncharacterized protein OS=Faeca...    45   0.001
tr|A8S7Q9|A8S7Q9_9FIRM Putative uncharacterized protein OS=Faeca...    45   0.001

>tr|A4QMC1|A4QMC1_PINKO ORF61c OS=Pinus koraiensis PE=4 SV=1
          Length = 61

 Score = 83.6 bits (205), Expect = 5e-15
 Identities = 39/45 (86%), Positives = 41/45 (91%)
 Frame = +1

Query: 115 RGRENASSQRPSTRRYGAEVTHATLPRKARTTFDKWVPVPETDTG 249
           RGRENASSQ PST+RY AEVTHA LP KARTTF+KWVPVPETDTG
Sbjct: 16  RGRENASSQCPSTKRYSAEVTHAILPGKARTTFNKWVPVPETDTG 60


>tr|A6N128|A6N128_ORYSI Putative uncharacterized protein (Fragment)
           OS=Oryza sativa subsp. indica PE=2 SV=1
          Length = 65

 Score = 66.2 bits (160), Expect = 8e-10
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = -2

Query: 264 ILYLPTCVGFGYRYPLVKGRSSFSWECGMGY 172
           ILYLPTCVGFGYRYP V+GRSSFSWE GMGY
Sbjct: 1   ILYLPTCVGFGYRYPFVEGRSSFSWEYGMGY 31


>tr|A8STH6|A8STH6_9FIRM Putative uncharacterized protein
           OS=Coprococcus eutactus ATCC 27759 GN=COPEUT_01474 PE=4
           SV=1
          Length = 108

 Score = 57.8 bits (138), Expect = 3e-07
 Identities = 32/55 (58%), Positives = 38/55 (69%)
 Frame = -3

Query: 335 HPFSRSYGAILPSSLEKVVSRP*VFSTYPPVSVSGTGTHLSKVVRAFLGSVAWVT 171
           H FSRSYG ILPSSL  ++     FS +PPVSV GTGTH  + + AFLGS  W+T
Sbjct: 12  HSFSRSYGVILPSSLTTLLPPALGFSPHPPVSVYGTGTH--ETIAAFLGS--WLT 62


>tr|A8SSN4|A8SSN4_9FIRM Putative uncharacterized protein
           OS=Coprococcus eutactus ATCC 27759 GN=COPEUT_01252 PE=4
           SV=1
          Length = 142

 Score = 57.8 bits (138), Expect = 3e-07
 Identities = 32/55 (58%), Positives = 38/55 (69%)
 Frame = -3

Query: 335 HPFSRSYGAILPSSLEKVVSRP*VFSTYPPVSVSGTGTHLSKVVRAFLGSVAWVT 171
           H FSRSYG ILPSSL  ++     FS +PPVSV GTGTH  + + AFLGS  W+T
Sbjct: 12  HSFSRSYGVILPSSLTTLLPPALGFSPHPPVSVYGTGTH--ETIAAFLGS--WLT 62


>tr|A6BL01|A6BL01_9FIRM Putative uncharacterized protein OS=Dorea
           longicatena DSM 13814 GN=DORLON_03015 PE=4 SV=1
          Length = 76

 Score = 57.4 bits (137), Expect = 4e-07
 Identities = 34/60 (56%), Positives = 39/60 (65%)
 Frame = -3

Query: 341 RRHPFSRSYGAILPSSLEKVVSRP*VFSTYPPVSVSGTGTHLSKVVRAFLGSVAWVTSAP 162
           R H FSRSYG ILPSSL  ++     FS +PPVSV GTG  LSK + AFL   AW+T  P
Sbjct: 10  RWHSFSRSYGVILPSSLTMLLPSALGFSPHPPVSVYGTG--LSKTIAAFLD--AWLTHFP 65


>tr|A6BKX8|A6BKX8_9FIRM Putative uncharacterized protein OS=Dorea
           longicatena DSM 13814 GN=DORLON_02987 PE=4 SV=1
          Length = 109

 Score = 57.4 bits (137), Expect = 4e-07
 Identities = 34/60 (56%), Positives = 39/60 (65%)
 Frame = -3

Query: 341 RRHPFSRSYGAILPSSLEKVVSRP*VFSTYPPVSVSGTGTHLSKVVRAFLGSVAWVTSAP 162
           R H FSRSYG ILPSSL  ++     FS +PPVSV GTG  LSK + AFL   AW+T  P
Sbjct: 10  RWHSFSRSYGVILPSSLTMLLPSALGFSPHPPVSVYGTG--LSKTIAAFLD--AWLTHFP 65


>tr|Q8CM04|Q8CM04_COREF Putative uncharacterized protein
           OS=Corynebacterium efficiens GN=CE1543 PE=4 SV=1
          Length = 261

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 26/37 (70%), Positives = 27/37 (72%)
 Frame = -2

Query: 339 EAPLLPKLRGHFAEFPRESCLAPLGILYLPTCVGFGY 229
           +APLLPKLRGHFAEF   S    L ILYL TCVG GY
Sbjct: 99  QAPLLPKLRGHFAEFLNHSSPERLSILYLTTCVGLGY 135


>tr|A5Z304|A5Z304_9FIRM Putative uncharacterized protein
           OS=Eubacterium ventriosum ATCC 27560 GN=EUBVEN_00035
           PE=4 SV=1
          Length = 76

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 27/41 (65%), Positives = 31/41 (75%)
 Frame = -3

Query: 344 VRRHPFSRSYGAILPSSLEKVVSRP*VFSTYPPVSVSGTGT 222
           +RRHP SRSYGAILPSSL  ++     FS +PPVSV GTGT
Sbjct: 9   LRRHPLSRSYGAILPSSLTMLLPSALGFSPHPPVSVYGTGT 49


>tr|A5ZYV3|A5ZYV3_9FIRM Putative uncharacterized protein
           OS=Ruminococcus obeum ATCC 29174 GN=RUMOBE_04226 PE=4
           SV=1
          Length = 50

 Score = 52.8 bits (125), Expect = 9e-06
 Identities = 26/39 (66%), Positives = 29/39 (74%)
 Frame = -3

Query: 341 RRHPFSRSYGAILPSSLEKVVSRP*VFSTYPPVSVSGTG 225
           RRHPFSRSYG ILPSSL  ++     FS +PPVSV GTG
Sbjct: 10  RRHPFSRSYGVILPSSLTMLLPPALGFSPHPPVSVYGTG 48


>tr|B1QFN7|B1QFN7_CLOBO Putative uncharacterized protein
           OS=Clostridium botulinum NCTC 2916 GN=CBN_0041 PE=4 SV=1
          Length = 151

 Score = 50.4 bits (119), Expect = 4e-05
 Identities = 25/41 (60%), Positives = 29/41 (70%)
 Frame = -3

Query: 341 RRHPFSRSYGAILPSSLEKVVSRP*VFSTYPPVSVSGTGTH 219
           RRHPFSRSYG  LPSSL  ++     FS + PVSV GTGT+
Sbjct: 17  RRHPFSRSYGVNLPSSLTAILPMALGFSPHLPVSVCGTGTY 57