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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919049
Clone id YMU001_000120_F01
Library
Length 486
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000120_F01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AAAGAGGACCTCAGAAATCTCCAAAAATCGTAGGCATAGGACTATAACTATGGCATTAAT
GACGTCACAACAAGATCTCCAAGCATTTGCTGCAAGGGGTATGGCATGGTGGTATTTTAA
CAAGGACCAGTGATGCTGCCAGGGTGTTGCAAGAGGTATTGCGAGGTCAGCATGACGATG
AGATTGAAGATGAACTATTACAACAAGAACTGCCCACAGGAGGCTGGTGGTCTGCTTTGC
TGAGAGCTCTGCAAGGTATTGTGGCATTGGGGAATGATGCTAAAGCTAGACTTCAAACAA
GAGACAACTTGGAAAATCGAGATTTTTATTGAGGGTCAAGTTATTGTCAATAATAATAGC
TCCACTAGGTAGATTTGAGACACATGTAGAGTCCATGAGGCTATCCAAATGTTGCAAGTT
TTAGTGTGTCAATGTGCATGCCTCAACTCGACTCTTATGTGTGACTTTTGGACTCGGTAC
AATCTG
■■Homology search results ■■ -
sp_hit_id Q42093
Definition sp|Q42093|MRP2_ARATH Multidrug resistance-associated protein 2 OS=Arabidopsis thaliana
Align length 72
Score (bit) 37.0
E-value 0.047
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919049|Adiantum capillus-veneris mRNA, clone:
YMU001_000120_F01.
         (486 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q42093|MRP2_ARATH Multidrug resistance-associated protein 2 O...    37   0.047
sp|Q9C8G9|MRP1_ARATH Multidrug resistance-associated protein 1 O...    37   0.061
sp|P40987|CIN1_YEAST Chromosome instability protein 1 OS=Sacchar...    30   7.6  
sp|Q12307|YD162_YEAST Putative uncharacterized protein YDL162C O...    29   9.9  
sp|Q99678|GPR20_HUMAN Probable G-protein coupled receptor 20 OS=...    29   9.9  

>sp|Q42093|MRP2_ARATH Multidrug resistance-associated protein 2
            OS=Arabidopsis thaliana GN=MRP2 PE=1 SV=2
          Length = 1623

 Score = 37.0 bits (84), Expect = 0.047
 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
 Frame = +3

Query: 114  ILTRTSDAARVLQEVLRGXXXXXXXXXXXXXXXPTGGWWSALLRALQGIVALGNDAKARL 293
            IL RT+DA   L+ VL G                  GW S+L R ++G+  +   A+ R+
Sbjct: 1545 ILKRTNDAVVTLRSVLEGKHDKEIAESLEEHNISREGWLSSLYRMVEGLAVMSRLARNRM 1604

Query: 294  QTRD-NLENRDF 326
            Q  D N E   F
Sbjct: 1605 QQPDYNFEGNTF 1616


>sp|Q9C8G9|MRP1_ARATH Multidrug resistance-associated protein 1
            OS=Arabidopsis thaliana GN=MRP1 PE=1 SV=1
          Length = 1622

 Score = 36.6 bits (83), Expect = 0.061
 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
 Frame = +3

Query: 114  ILTRTSDAARVLQEVLRGXXXXXXXXXXXXXXXPTGGWWSALLRALQGIVALGNDAKARL 293
            IL +T DA   L+ VL G                   WW +L + ++G+  +   A+ R+
Sbjct: 1544 ILKKTKDAVVTLRSVLEGKHDKEIEDSLNQSDISRERWWPSLYKMVEGLAVMSRLARNRM 1603

Query: 294  QTRD-NLENRDF 326
            Q  D NLE + F
Sbjct: 1604 QHPDYNLEGKSF 1615


>sp|P40987|CIN1_YEAST Chromosome instability protein 1
           OS=Saccharomyces cerevisiae GN=CIN1 PE=1 SV=1
          Length = 1014

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 18/66 (27%), Positives = 29/66 (43%)
 Frame = +1

Query: 256 VLWHWGMMLKLDFKQETTWKIEIFIEGQVIVNNNSSTR*I*DTCRVHEAIQMLQVLVCQC 435
           +L +W +  + DF QE  WK    +  Q  +N              +E I ++Q ++ QC
Sbjct: 579 ILKYWQLTGQNDFNQELFWKFVDIVSPQKKLN------------LYNEFIPIIQQIISQC 626

Query: 436 ACLNST 453
             LN T
Sbjct: 627 VSLNYT 632


>sp|Q12307|YD162_YEAST Putative uncharacterized protein YDL162C
           OS=Saccharomyces cerevisiae GN=YDL162C PE=5 SV=1
          Length = 118

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 12/81 (14%)
 Frame = -1

Query: 207 LVVIVHLQSHRHADLAIPLATPWQHHWSLLKY---HHAIPL---------AANAWRSCCD 64
           L+ ++    H + D ++ +AT   +H S +KY   H A P            + W  CC 
Sbjct: 27  LLFVIERNFHHYPDDSLYVATISDNHTSKIKYFEQHKAPPTFRKTCNRNSYCSRWFYCCL 86

Query: 63  VINAIVIVLCLRFLEISEVLF 1
            +++   + C+  LE+++ +F
Sbjct: 87  TLSSFCSLRCVPPLEMADGIF 107


>sp|Q99678|GPR20_HUMAN Probable G-protein coupled receptor 20
           OS=Homo sapiens GN=GPR20 PE=2 SV=1
          Length = 358

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = -1

Query: 222 LLWAVLVVIVHLQSHRHA-DLAIPLATPWQHHWSLLKYHHAIPLAANAWRSCCDVI 58
           LL  VL++ +   +  HA  +A+ L     HH SL+ YH A+ L  ++  SC D I
Sbjct: 242 LLLTVLIIFLVCFTPFHARQVAVALWPDMPHHTSLVVYHVAVTL--SSLNSCMDPI 295
tr_hit_id A7Q1B7
Definition tr|A7Q1B7|A7Q1B7_VITVI Chromosome chr10 scaffold_43, whole genome shotgun sequence OS=Vitis vinifera
Align length 69
Score (bit) 45.1
E-value 0.002
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919049|Adiantum capillus-veneris mRNA, clone:
YMU001_000120_F01.
         (486 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7Q1B7|A7Q1B7_VITVI Chromosome chr10 scaffold_43, whole genom...    45   0.002
tr|A9TGR0|A9TGR0_PHYPA ATP-binding cassette transporter, subfami...    44   0.005
tr|A9TWW4|A9TWW4_PHYPA ATP-binding cassette transporter, subfami...    40   0.044
tr|Q8GU51|Q8GU51_ORYSJ MRP-like ABC transporter (Fragment) OS=Or...    40   0.057
tr|Q7XTT6|Q7XTT6_ORYSJ OSJNBa0058K23.17 protein OS=Oryza sativa ...    40   0.057
tr|Q0JA19|Q0JA19_ORYSJ Os04g0620000 protein OS=Oryza sativa subs...    40   0.057
tr|Q01JU7|Q01JU7_ORYSA H0714H04.5 protein OS=Oryza sativa GN=H07...    40   0.057
tr|A3AXH7|A3AXH7_ORYSJ Putative uncharacterized protein OS=Oryza...    40   0.057
tr|A2XXN8|A2XXN8_ORYSI Putative uncharacterized protein OS=Oryza...    40   0.057
tr|A7Q1C1|A7Q1C1_VITVI Chromosome chr10 scaffold_43, whole genom...    38   0.28 
tr|Q0WLP4|Q0WLP4_ARATH MRP-like ABC transporter (Fragment) OS=Ar...    37   0.48 
tr|B7FNG1|B7FNG1_MEDTR Putative uncharacterized protein OS=Medic...    35   1.8  
tr|B1Q479|B1Q479_CAPCH Putative multidrug resistance-associated ...    34   3.1  
tr|A9TJV3|A9TJV3_PHYPA Predicted protein OS=Physcomitrella paten...    34   4.1  
tr|Q8WQL9|Q8WQL9_LEUMA Male-specific beta-glycosidase OS=Leucoph...    33   5.5  
tr|B8G3U2|B8G3U2_9CHLR Putative uncharacterized protein OS=Chlor...    33   7.2  

>tr|A7Q1B7|A7Q1B7_VITVI Chromosome chr10 scaffold_43, whole genome
            shotgun sequence OS=Vitis vinifera GN=GSVIVT00028389001
            PE=3 SV=1
          Length = 1135

 Score = 45.1 bits (105), Expect = 0.002
 Identities = 23/69 (33%), Positives = 33/69 (47%)
 Frame = +3

Query: 114  ILTRTSDAARVLQEVLRGXXXXXXXXXXXXXXXPTGGWWSALLRALQGIVALGNDAKARL 293
            IL +T DA   LQ VL G                  GWWS+L R ++G+  +   A+ RL
Sbjct: 1058 ILKKTKDAVITLQGVLEGKHDKVIEETLNQYQVSRDGWWSSLYRMIEGLAVMSRLARNRL 1117

Query: 294  QTRDNLENR 320
            Q+ +  E+R
Sbjct: 1118 QSENGFEDR 1126


>tr|A9TGR0|A9TGR0_PHYPA ATP-binding cassette transporter, subfamily C,
            member 11, group MRP protein PpABCC11 OS=Physcomitrella
            patens subsp. patens GN=ppabcc11 PE=3 SV=1
          Length = 1630

 Score = 43.5 bits (101), Expect = 0.005
 Identities = 24/71 (33%), Positives = 32/71 (45%)
 Frame = +3

Query: 114  ILTRTSDAARVLQEVLRGXXXXXXXXXXXXXXXPTGGWWSALLRALQGIVALGNDAKARL 293
            IL  T DA R L +VL G                  GWWSAL R L+G   +G +A+ R+
Sbjct: 1549 ILEVTRDATRTLHQVLVGQHDTSIREALLQRQATEEGWWSALTRVLEGFALMGREARNRI 1608

Query: 294  QTRDNLENRDF 326
                + E  D+
Sbjct: 1609 SHNQDREAFDW 1619


>tr|A9TWW4|A9TWW4_PHYPA ATP-binding cassette transporter, subfamily C,
            member 3, group MRP protein PpABCC3 OS=Physcomitrella
            patens subsp. patens GN=ppabcc3 PE=3 SV=1
          Length = 1622

 Score = 40.4 bits (93), Expect = 0.044
 Identities = 22/71 (30%), Positives = 30/71 (42%)
 Frame = +3

Query: 114  ILTRTSDAARVLQEVLRGXXXXXXXXXXXXXXXPTGGWWSALLRALQGIVALGNDAKARL 293
            IL  T DA R L +VL G                   WWSAL R L+G   +G + + R+
Sbjct: 1541 ILEATRDATRTLHQVLLGHHDTSIRETLLQRQATEESWWSALTRVLEGFAVMGREGRNRI 1600

Query: 294  QTRDNLENRDF 326
                + E  D+
Sbjct: 1601 SHDQDREPIDW 1611


>tr|Q8GU51|Q8GU51_ORYSJ MRP-like ABC transporter (Fragment) OS=Oryza
            sativa subsp. japonica GN=mrp1 PE=3 SV=1
          Length = 1627

 Score = 40.0 bits (92), Expect = 0.057
 Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
 Frame = +3

Query: 90   LQGVWHGGILTRTSDAARVLQEVLRGXXXXXXXXXXXXXXXPTGGWWSALLRALQGIVAL 269
            L+      IL +T DA   LQ VL G               P+  WWS+L + ++G+  +
Sbjct: 1543 LEAAEGNNILRKTKDAVITLQNVLEGKHNTEIDDTLAQYEVPSDRWWSSLYKVMEGLAMM 1602

Query: 270  GNDAKARLQTRD-NLEN 317
                + RLQ    N EN
Sbjct: 1603 SRLGRNRLQQPSYNFEN 1619


>tr|Q7XTT6|Q7XTT6_ORYSJ OSJNBa0058K23.17 protein OS=Oryza sativa
            subsp. japonica GN=OSJNBa0058K23.17 PE=3 SV=2
          Length = 1628

 Score = 40.0 bits (92), Expect = 0.057
 Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
 Frame = +3

Query: 90   LQGVWHGGILTRTSDAARVLQEVLRGXXXXXXXXXXXXXXXPTGGWWSALLRALQGIVAL 269
            L+      IL +T DA   LQ VL G               P+  WWS+L + ++G+  +
Sbjct: 1543 LEAAEGNNILRKTKDAVITLQNVLEGKHNTEIDDTLAQYEVPSDRWWSSLYKVMEGLAMM 1602

Query: 270  GNDAKARLQTRD-NLEN 317
                + RLQ    N EN
Sbjct: 1603 SRLGRNRLQQPSYNFEN 1619


>tr|Q0JA19|Q0JA19_ORYSJ Os04g0620000 protein OS=Oryza sativa subsp.
            japonica GN=Os04g0620000 PE=3 SV=1
          Length = 1650

 Score = 40.0 bits (92), Expect = 0.057
 Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
 Frame = +3

Query: 90   LQGVWHGGILTRTSDAARVLQEVLRGXXXXXXXXXXXXXXXPTGGWWSALLRALQGIVAL 269
            L+      IL +T DA   LQ VL G               P+  WWS+L + ++G+  +
Sbjct: 1565 LEAAEGNNILRKTKDAVITLQNVLEGKHNTEIDDTLAQYEVPSDRWWSSLYKVMEGLAMM 1624

Query: 270  GNDAKARLQTRD-NLEN 317
                + RLQ    N EN
Sbjct: 1625 SRLGRNRLQQPSYNFEN 1641


>tr|Q01JU7|Q01JU7_ORYSA H0714H04.5 protein OS=Oryza sativa
            GN=H0714H04.5 PE=3 SV=1
          Length = 1628

 Score = 40.0 bits (92), Expect = 0.057
 Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
 Frame = +3

Query: 90   LQGVWHGGILTRTSDAARVLQEVLRGXXXXXXXXXXXXXXXPTGGWWSALLRALQGIVAL 269
            L+      IL +T DA   LQ VL G               P+  WWS+L + ++G+  +
Sbjct: 1543 LEAAEGNNILRKTKDAVITLQNVLEGKHNTEIDDTLAQYEVPSDRWWSSLYKVMEGLAMM 1602

Query: 270  GNDAKARLQTRD-NLEN 317
                + RLQ    N EN
Sbjct: 1603 SRLGRNRLQQPSYNFEN 1619


>tr|A3AXH7|A3AXH7_ORYSJ Putative uncharacterized protein OS=Oryza
            sativa subsp. japonica GN=OsJ_015499 PE=3 SV=1
          Length = 1463

 Score = 40.0 bits (92), Expect = 0.057
 Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
 Frame = +3

Query: 90   LQGVWHGGILTRTSDAARVLQEVLRGXXXXXXXXXXXXXXXPTGGWWSALLRALQGIVAL 269
            L+      IL +T DA   LQ VL G               P+  WWS+L + ++G+  +
Sbjct: 1378 LEAAEGNNILRKTKDAVITLQNVLEGKHNTEIDDTLAQYEVPSDRWWSSLYKVMEGLAMM 1437

Query: 270  GNDAKARLQTRD-NLEN 317
                + RLQ    N EN
Sbjct: 1438 SRLGRNRLQQPSYNFEN 1454


>tr|A2XXN8|A2XXN8_ORYSI Putative uncharacterized protein OS=Oryza
            sativa subsp. indica GN=OsI_17449 PE=3 SV=1
          Length = 1650

 Score = 40.0 bits (92), Expect = 0.057
 Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
 Frame = +3

Query: 90   LQGVWHGGILTRTSDAARVLQEVLRGXXXXXXXXXXXXXXXPTGGWWSALLRALQGIVAL 269
            L+      IL +T DA   LQ VL G               P+  WWS+L + ++G+  +
Sbjct: 1565 LEAAEGNNILRKTKDAVITLQNVLEGKHNTEIDDTLAQYEVPSDRWWSSLYKVMEGLAMM 1624

Query: 270  GNDAKARLQTRD-NLEN 317
                + RLQ    N EN
Sbjct: 1625 SRLGRNRLQQPSYNFEN 1641


>tr|A7Q1C1|A7Q1C1_VITVI Chromosome chr10 scaffold_43, whole genome
            shotgun sequence OS=Vitis vinifera GN=GSVIVT00028393001
            PE=3 SV=1
          Length = 1193

 Score = 37.7 bits (86), Expect = 0.28
 Identities = 19/65 (29%), Positives = 30/65 (46%)
 Frame = +3

Query: 114  ILTRTSDAARVLQEVLRGXXXXXXXXXXXXXXXPTGGWWSALLRALQGIVALGNDAKARL 293
            IL +T+DA   L+ VL G               P   WWSAL + ++G+  +   A+ R 
Sbjct: 1115 ILKKTNDAVLTLRGVLEGTHDEVIEEMLKEYQVPRDRWWSALYKMVEGLAVMNRLARHRF 1174

Query: 294  QTRDN 308
            Q  ++
Sbjct: 1175 QQSEH 1179