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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919056
Clone id YMU001_000120_F12
Library
Length 497
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000120_F12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TAGGAACCTGTACGTGAATTTCATACAGTTATGGTTTATCTAGAAGTAACCATAGCTCAT
AAGACATGACATTAGTCATGGCAGTGCAATCTATCTCTGCTGTAAAATTGAGTTTTAGTT
TCTCATGCACATCCAACGAGAATTTAATCTTCTTGTTGGCTGCCAAGTAACTGATGTTCT
CTTTGCTTTTGGTACCTGTCTTGGACTTTTGTGTTTTGGAAGCTTTGTCCTCCTCTTGTA
TGTTGAACTTCTTTGTCATTTGACTGGTTGTAGCATGTCCCAAGTGCTTACTATCTATTA
TTGTAGTTGCTTGTTGGTGTTCATTGCTAGTTTCTGACTGTGACACCTTGATTCTTGATT
TCAGAAGCTCTCTATTACTATTTACTGCTTCTAGCACTTGAAGGTAATTCAATGGTGACT
TTTCTTTTGGAAATCTTTTGAAGCTTGTGTAGCAGGATGTTGAGGTTGACTCTCTTCTTA
TGATGCAATGGTCTCCG
■■Homology search results ■■ -
sp_hit_id Q32MH5
Definition sp|Q32MH5|K1370_HUMAN Uncharacterized protein KIAA1370 OS=Homo sapiens
Align length 74
Score (bit) 33.1
E-value 0.73
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919056|Adiantum capillus-veneris mRNA, clone:
YMU001_000120_F12.
         (497 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q32MH5|K1370_HUMAN Uncharacterized protein KIAA1370 OS=Homo s...    33   0.73 
sp|P39880|CUX1_HUMAN Homeobox protein cut-like 1 OS=Homo sapiens...    32   2.1  
sp|P39881|CUX1_CANFA Homeobox protein cut-like 1 (Fragment) OS=C...    32   2.1  
sp|Q7T229|VSPH_BOTJR Venom serine protease homolog OS=Bothrops j...    30   4.7  
sp|O30408|TYCB_BREPA Tyrocidine synthetase 2 OS=Brevibacillus pa...    30   4.7  
sp|P53565|CUX1_RAT Homeobox protein cut-like 1 (Fragment) OS=Rat...    30   4.7  
sp|P53564|CUX1_MOUSE Homeobox protein cut-like 1 OS=Mus musculus...    30   4.7  

>sp|Q32MH5|K1370_HUMAN Uncharacterized protein KIAA1370 OS=Homo
           sapiens GN=KIAA1370 PE=2 SV=2
          Length = 1076

 Score = 33.1 bits (74), Expect = 0.73
 Identities = 22/74 (29%), Positives = 40/74 (54%)
 Frame = -2

Query: 454 CYTSFKRFPKEKSPLNYLQVLEAVNSNRELLKSRIKVSQSETSNEHQQATTIIDSKHLGH 275
           C+TSFK   KEK  L +    +  N+  E+++S  + +Q+++S+    +T+ I S+H   
Sbjct: 564 CFTSFKNNSKEKCSLKHQTRNQCQNNPSEIIQSTYQETQNKSSS---LSTSSILSQH--K 618

Query: 274 ATTSQMTKKFNIQE 233
                +T +F  QE
Sbjct: 619 ENNLDLTSRFKEQE 632


>sp|P39880|CUX1_HUMAN Homeobox protein cut-like 1 OS=Homo sapiens
            GN=CUX1 PE=1 SV=2
          Length = 1505

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -1

Query: 491  PLHHKKRVNLNILLHKLQKISKRKVTIE 408
            PL  KK  NLN ++H+L+K + R+  IE
Sbjct: 1475 PLRKKKAANLNSIIHRLEKAASREEPIE 1502


>sp|P39881|CUX1_CANFA Homeobox protein cut-like 1 (Fragment) OS=Canis
            familiaris GN=CUX1 PE=2 SV=1
          Length = 975

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -1

Query: 491  PLHHKKRVNLNILLHKLQKISKRKVTIE 408
            PL  KK  NLN ++H+L+K + R+  IE
Sbjct: 945  PLRKKKAANLNSIIHRLEKAASREEPIE 972


>sp|Q7T229|VSPH_BOTJR Venom serine protease homolog OS=Bothrops
           jararacussu PE=2 SV=1
          Length = 260

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = -2

Query: 496 GDHCIIRRESTSTSCYTS-FKRFPKEKSPLNYLQVLEAVNSNRELLKSRIKVSQSETSNE 320
           GD C I       + YTS  +RF    + +N   VL A N +R+ ++ ++ +     +NE
Sbjct: 28  GDECNINEHRFLVALYTSRSRRFHCSGTLINQEWVLTAANCDRKNIRIKLGMHSKNVTNE 87

Query: 319 HQQ 311
            +Q
Sbjct: 88  DEQ 90


>sp|O30408|TYCB_BREPA Tyrocidine synthetase 2 OS=Brevibacillus
            parabrevis GN=tycB PE=3 SV=1
          Length = 3587

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 20/75 (26%), Positives = 39/75 (52%)
 Frame = -2

Query: 454  CYTSFKRFPKEKSPLNYLQVLEAVNSNRELLKSRIKVSQSETSNEHQQATTIIDSKHLGH 275
            C   F R   E+  L+YLQ+L+AV++N E   ++I++    T++E Q+     +     +
Sbjct: 1447 CTKLFARETIERMSLHYLQILQAVSANTEQELAQIEML---TAHEKQELLVHFNDTAALY 1503

Query: 274  ATTSQMTKKFNIQEE 230
               S +++ F  Q +
Sbjct: 1504 PAESTLSQLFEDQAQ 1518


>sp|P53565|CUX1_RAT Homeobox protein cut-like 1 (Fragment) OS=Rattus
           norvegicus GN=Cux1 PE=2 SV=1
          Length = 862

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -1

Query: 491 PLHHKKRVNLNILLHKLQKISKRKVTIE 408
           P+  KK  NLN ++H+L+K + R+  IE
Sbjct: 832 PVRKKKAANLNSIIHRLEKAASREEPIE 859


>sp|P53564|CUX1_MOUSE Homeobox protein cut-like 1 OS=Mus musculus
            GN=Cux1 PE=1 SV=3
          Length = 1515

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -1

Query: 491  PLHHKKRVNLNILLHKLQKISKRKVTIE 408
            P+  KK  NLN ++H+L+K + R+  IE
Sbjct: 1485 PVRKKKAANLNSIIHRLEKAASREEPIE 1512
tr_hit_id A8N9S9
Definition tr|A8N9S9|A8N9S9_COPC7 Putative uncharacterized protein OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003)
Align length 62
Score (bit) 34.7
E-value 2.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919056|Adiantum capillus-veneris mRNA, clone:
YMU001_000120_F12.
         (497 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A8N9S9|A8N9S9_COPC7 Putative uncharacterized protein OS=Copri...    35   2.6  
tr|Q24G77|Q24G77_TETTH Putative uncharacterized protein OS=Tetra...    34   3.4  
tr|Q7SYD6|Q7SYD6_DANRE Tubulin, gamma complex associated protein...    34   4.4  
tr|B1MMQ5|B1MMQ5_MYCA9 Putative uncharacterized protein OS=Mycob...    34   4.4  
tr|Q7REW7|Q7REW7_PLAYO Putative uncharacterized protein PY04946 ...    33   5.7  
tr|Q6FBW0|Q6FBW0_ACIAD Sulfate ester binding protein (ABC superf...    33   7.5  
tr|Q95KZ7|Q95KZ7_HORSE AlphaS1-casein OS=Equus caballus PE=2 SV=1      33   7.5  
tr|B4DEP5|B4DEP5_HUMAN cDNA FLJ54413 OS=Homo sapiens PE=2 SV=1         33   7.5  

>tr|A8N9S9|A8N9S9_COPC7 Putative uncharacterized protein
           OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC
           9003) GN=CC1G_11582 PE=3 SV=1
          Length = 650

 Score = 34.7 bits (78), Expect = 2.6
 Identities = 22/62 (35%), Positives = 29/62 (46%)
 Frame = -3

Query: 342 HSQKLAMNTNKQLQ**IVSTWDMLQPVK*QRSSTYKRRTKLPKHKSPRQVPKAKRTSVTW 163
           HS++LAM+T+  LQ    + W    P     S TY  +TKLPK   P       R   T 
Sbjct: 17  HSKRLAMSTSTNLQFTRPADWKERAPEALPGSVTYAAQTKLPKLPVPNLQDTLSRLKETL 76

Query: 162 QP 157
           +P
Sbjct: 77  KP 78


>tr|Q24G77|Q24G77_TETTH Putative uncharacterized protein
            OS=Tetrahymena thermophila SB210 GN=TTHERM_01212890 PE=4
            SV=1
          Length = 2253

 Score = 34.3 bits (77), Expect = 3.4
 Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
 Frame = -2

Query: 481  IRRESTSTSCYTSFKRFPKEKSPLNYLQVLEAVNSNRELLKSRIK--VSQSETSNEHQQA 308
            I+  +T+ +CY  F+ F +  +  N  ++ + + +N+E   S IK  +   +T ++ Q  
Sbjct: 1950 IQNNNTTQNCYQQFQFFKRIYAYHNSFEIYQQITTNQETSHSAIKSILFYQQTESQKQYE 2009

Query: 307  TTIIDSKHLGHATTSQMTKKF 245
              +ID+  L      +M   F
Sbjct: 2010 QLLIDNVQLHFPNDEKMQSSF 2030


>tr|Q7SYD6|Q7SYD6_DANRE Tubulin, gamma complex associated protein 2
           OS=Danio rerio GN=tubgcp2 PE=2 SV=1
          Length = 882

 Score = 33.9 bits (76), Expect = 4.4
 Identities = 17/60 (28%), Positives = 29/60 (48%)
 Frame = -2

Query: 484 IIRRESTSTSCYTSFKRFPKEKSPLNYLQVLEAVNSNRELLKSRIKVSQSETSNEHQQAT 305
           ++ R     SCY++  RF +EKS   Y QV  A+ +    L     +  ++  + H+Q T
Sbjct: 259 LVNRILPVASCYSTITRFTEEKSSFEYGQVNHALTAAMRTLMKEYLILVTQLEHLHRQGT 318


>tr|B1MMQ5|B1MMQ5_MYCA9 Putative uncharacterized protein
           OS=Mycobacterium abscessus (strain ATCC 19977 / DSM
           44196) GN=MAB_1531c PE=4 SV=1
          Length = 295

 Score = 33.9 bits (76), Expect = 4.4
 Identities = 21/90 (23%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
 Frame = -2

Query: 466 TSTSCYTSFKRFPKEKSPLNYLQVLEAVN----------SNRELLKSRIKVSQSETSNEH 317
           T+T+   S + F + ++  + ++V E ++          ++ E LKSR++ +  + S+  
Sbjct: 2   TTTTLNESTRNFTRTRNGYDPIEVNEYISRLTIMHQSGLNDVETLKSRLEDATKQISSLK 61

Query: 316 QQATTIIDSKHLGHATTSQMTKKFNIQEED 227
            + TT+ D+    HA T +M K   I  ++
Sbjct: 62  DEVTTLSDTSPSAHAMTDRMAKMLRIAVDE 91


>tr|Q7REW7|Q7REW7_PLAYO Putative uncharacterized protein PY04946
           OS=Plasmodium yoelii yoelii GN=PY04946 PE=4 SV=1
          Length = 143

 Score = 33.5 bits (75), Expect = 5.7
 Identities = 14/43 (32%), Positives = 26/43 (60%)
 Frame = -2

Query: 448 TSFKRFPKEKSPLNYLQVLEAVNSNRELLKSRIKVSQSETSNE 320
           T+F+   K +S   Y+++LE +N+  E +  +IK S  E +N+
Sbjct: 17  TNFQENIKIESKKKYIEILELINNENETINKKIKQSHDELNND 59


>tr|Q6FBW0|Q6FBW0_ACIAD Sulfate ester binding protein (ABC
           superfamily, peri_bind) OS=Acinetobacter sp. (strain
           ADP1) GN=atsR PE=4 SV=1
          Length = 382

 Score = 33.1 bits (74), Expect = 7.5
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = -2

Query: 391 EAVNSNRELLKSRIKVSQSETSNEHQQATTIIDSKHLGHATTSQMTKKFNIQEE 230
           +  N N +++K RI V    +S  H   T +ID  +L      +  KK NIQ E
Sbjct: 51  KTTNQNEDIVKIRIAVPDLSSSERHSSGTPLIDYIYLNQLLEKEFAKK-NIQIE 103


>tr|Q95KZ7|Q95KZ7_HORSE AlphaS1-casein OS=Equus caballus PE=2 SV=1
          Length = 208

 Score = 33.1 bits (74), Expect = 7.5
 Identities = 21/70 (30%), Positives = 32/70 (45%)
 Frame = -2

Query: 439 KRFPKEKSPLNYLQVLEAVNSNRELLKSRIKVSQSETSNEHQQATTIIDSKHLGHATTSQ 260
           K   + K P   L+ +  +N  RELLK + K    +TSNE  +   I D +    ++TS 
Sbjct: 36  KVLKERKFPSFALEYINELNRQRELLKEKQKDEHKDTSNESTEEYLIEDPEQQESSSTSS 95

Query: 259 MTKKFNIQEE 230
             +   I  E
Sbjct: 96  SEEVVPINTE 105


>tr|B4DEP5|B4DEP5_HUMAN cDNA FLJ54413 OS=Homo sapiens PE=2 SV=1
          Length = 689

 Score = 33.1 bits (74), Expect = 7.5
 Identities = 22/74 (29%), Positives = 40/74 (54%)
 Frame = -2

Query: 454 CYTSFKRFPKEKSPLNYLQVLEAVNSNRELLKSRIKVSQSETSNEHQQATTIIDSKHLGH 275
           C+TSFK   KEK  L +    +  N+  E+++S  + +Q+++S+    +T+ I S+H   
Sbjct: 290 CFTSFKNNSKEKCSLKHQTRNQCQNNPSEIIQSTYQETQNKSSS---LSTSSILSQH--K 344

Query: 274 ATTSQMTKKFNIQE 233
                +T +F  QE
Sbjct: 345 ENNLDLTSRFKEQE 358