BP919062 |
Clone id |
YMU001_000120_G07 |
Library |
YMU01 |
Length |
479 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000120_G07. |
Accession |
BP919062 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL572Contig1 |
Sequence |
ACTCCAGTGACGCTGCTGTCTCTGCCTCCTCAGCTGCCAAAAGCGCCTCAAGGGATCTCT CTGAAGAGACGTACTTGCTGATGCTGTGAGCTTTGACATGACTAGAAAGAACAGTATTTG AGTACTGGTTTGTATATAGCCTCGCCCTTTTGTGCAACAGACCTAGCTTCTCTGCTCTCA CACGCTTCAGTGATAATGCACCCTGTTTTTTCCTTTTGGCATCTCGTTCCTCAGTTCTCT CTCCCTTTGAAATCTTCTCATCAACCAAATCAATGATACCATCCAGTCTGTCCTCCTTGA TAGGTTTGTCGCCATGCCGTATTGCCACTTCTTGTTGCACAATTAACTCTGCCATGGCAT TGTCACTTGTCTCATTATCTTTCACATCCACAGTTGTCACTTCCAACTTGATAGCATGCA TAAGCAAAAGTGACTCTGCGTTATCTTCAACTCCAGACTGAGGTGGTGTACTACCCGCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P60040 |
Definition |
sp|P60040|RL72_ARATH 60S ribosomal protein L7-2 OS=Arabidopsis thaliana |
Align length |
50 |
Score (bit) |
35.0 |
E-value |
0.18 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q1MY30 |
Definition |
tr|Q1MY30|Q1MY30_9GAMM TraG OS=Oceanobacter sp. RED65 |
Align length |
82 |
Score (bit) |
36.6 |
E-value |
0.64 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919062|Adiantum capillus-veneris mRNA, clone: YMU001_000120_G07. (479 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q1MY30|Q1MY30_9GAMM TraG OS=Oceanobacter sp. RED65 GN=RED65_0... 37 0.64 tr|B2KET3|B2KET3_ELUMP PpiC-type peptidyl-prolyl cis-trans isome... 36 1.1 tr|Q8IJP7|Q8IJP7_PLAF7 Putative uncharacterized protein OS=Plasm... 36 1.1 tr|A8I4E9|A8I4E9_CHLRE Flagellar associated protein OS=Chlamydom... 35 1.4 tr|Q6U967|Q6U967_9CAUD Binds Mot boxes at phage middle promoters... 35 1.4 tr|Q56EC9|Q56EC9_9CAUD MotA OS=Aeromonas phage 31 GN=motA PE=4 SV=1 35 1.4 tr|A9PEI9|A9PEI9_POPTR Putative uncharacterized protein OS=Popul... 35 1.9 tr|A8MRH4|A8MRH4_ARATH Uncharacterized protein At2g01250.2 OS=Ar... 35 1.9 tr|Q54BR4|Q54BR4_DICDI Putative uncharacterized protein OS=Dicty... 35 1.9 tr|A2F9I8|A2F9I8_TRIVA Putative uncharacterized protein OS=Trich... 35 1.9 tr|Q03X63|Q03X63_LEUMM Putative uncharacterized protein OS=Leuco... 35 2.4 tr|B8GC43|B8GC43_9CHLR PHA accumulation regulator DNA-binding pr... 35 2.4 tr|Q96W68|Q96W68_CANAL Heat shock protein Hsp104 OS=Candida albi... 35 2.4 tr|A9BMU7|A9BMU7_DELAS GTP-binding proten HflX OS=Delftia acidov... 34 3.2 tr|A2FNX7|A2FNX7_TRIVA Putative uncharacterized protein OS=Trich... 34 3.2 tr|Q9KAI2|Q9KAI2_BACHD Lipopolysaccharide N-acetylglucosaminyltr... 34 4.1 tr|A8UA49|A8UA49_9BILA Putative ribosomal protein L7 (Fragment) ... 34 4.1 tr|Q0V5B7|Q0V5B7_PHANO Putative uncharacterized protein OS=Phaeo... 34 4.1 tr|A7EB47|A7EB47_SCLS1 Putative uncharacterized protein OS=Scler... 34 4.1 tr|B7BL65|B7BL65_9CLOT Putative uncharacterized protein OS=Clost... 33 5.4 tr|A9PGL2|A9PGL2_POPTR Putative uncharacterized protein OS=Popul... 33 5.4 tr|B4LZY0|B4LZY0_DROVI GJ23215 OS=Drosophila virilis GN=GJ23215 ... 33 5.4 tr|A2GM94|A2GM94_TRIVA Putative uncharacterized protein OS=Trich... 33 5.4 tr|A2F5I5|A2F5I5_TRIVA Putative uncharacterized protein OS=Trich... 33 5.4 tr|A2E9P8|A2E9P8_TRIVA Putative uncharacterized protein OS=Trich... 33 5.4 tr|A0DKG7|A0DKG7_PARTE Chromosome undetermined scaffold_54, whol... 33 5.4 tr|Q96W69|Q96W69_CANAL Heat shock protein Hsp104 OS=Candida albi... 33 5.4 tr|Q5A3G5|Q5A3G5_CANAL Putative uncharacterized protein OS=Candi... 33 5.4 tr|Q5A376|Q5A376_CANAL Putative uncharacterized protein HSP104 O... 33 5.4 tr|A8TD22|A8TD22_METVO UvrD/REP helicase OS=Methanococcus voltae... 33 5.4
>tr|Q1MY30|Q1MY30_9GAMM TraG OS=Oceanobacter sp. RED65 GN=RED65_01968 PE=4 SV=1 Length = 1038
Score = 36.6 bits (83), Expect = 0.64 Identities = 24/82 (29%), Positives = 41/82 (50%) Frame = -2
Query: 460 QSGVEDNAESLLLMHAIKLEVTTVDVKDNETSDNAMAELIVQQEVAIRHGDKPIKEDRLD 281 QS E+NA+ ++ H I T+++K+ E+S N+ ++ E IR + +D+ D Sbjct: 835 QSSFEENAQGEVVQHGISGAENTIELKNAESSLNSSEGILANNE-QIRQDNSSFSKDQSD 893
Query: 280 GIIDLVDEKISKGERTEERDAK 215 I+D E I K + D K Sbjct: 894 -IVDAGKETIEKAGDRIQGDTK 914
>tr|B2KET3|B2KET3_ELUMP PpiC-type peptidyl-prolyl cis-trans isomerase OS=Elusimicrobium minutum (strain Pei191) GN=Emin_1481 PE=3 SV=1 Length = 390
Score = 35.8 bits (81), Expect = 1.1 Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 5/121 (4%) Frame = -2
Query: 439 AESLLLMHAIKLEVTTVDVKDNETSDNAMAELIVQQEVAIRHG--DKPIKEDRLDGIIDL 266 A L+ +KL++ +V D +D + + ++ V R D+ +K+ + D +I Sbjct: 57 APKLMEQPGVKLKLEK-EVLDQMINDELLFQAAEKEGVKAREDEIDEAVKQAK-DALIPA 114
Query: 265 VDEK---ISKGERTEERDAKRKKQGALSLKRVRAEKLGLLHKRARLYTNQYSNTVLSSHV 95 DEK IS+ ERT++ DA KK+G +S K+ R +KL + ++ + +Y T + + V Sbjct: 115 ADEKGKPISEKERTKQFDAALKKEG-ISQKQFR-DKL-----KKQIMSRKYVETAIVTKV 167
Query: 94 K 92 K Sbjct: 168 K 168
>tr|Q8IJP7|Q8IJP7_PLAF7 Putative uncharacterized protein OS=Plasmodium falciparum (isolate 3D7) GN=PF10_0145 PE=4 SV=1 Length = 775
Score = 35.8 bits (81), Expect = 1.1 Identities = 18/69 (26%), Positives = 36/69 (52%) Frame = -2
Query: 307 KPIKEDRLDGIIDLVDEKISKGERTEERDAKRKKQGALSLKRVRAEKLGLLHKRARLYTN 128 KP+ E + I+D + E+ E+ E+ + + KKQ AL K ++ K + ++ Y + Sbjct: 97 KPLDEKGVASILDKIKEERENTEKREKEEEEEKKQNALKKKNLKYSKKANILEKKSSYED 156
Query: 127 QYSNTVLSS 101 Y+ ++S Sbjct: 157 TYAVEKINS 165
>tr|A8I4E9|A8I4E9_CHLRE Flagellar associated protein OS=Chlamydomonas reinhardtii GN=FAP100 PE=4 SV=1 Length = 576
Score = 35.4 bits (80), Expect = 1.4 Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 2/99 (2%) Frame = -2
Query: 448 EDNAESLLLMHAIKLEVTTVDVKDNETSDNAMAELIVQQEVAIRHGDKPIKED--RLDGI 275 E+ A+ + I L ++D K E + E Q+E A++ ++ ++ED R D Sbjct: 113 ENMADFIAKKREIFLLQMSLDTKRAEIKK--LEERARQREEALKKSEQMLEEDALRFDAF 170
Query: 274 IDLVDEKISKGERTEERDAKRKKQGALSLKRVRAEKLGL 158 + DEK+ + + E +AK K+ L +KR+ L Sbjct: 171 LKENDEKVQEAIKKAEAEAKAKQDKVLEIKRLNTATAAL 209
>tr|Q6U967|Q6U967_9CAUD Binds Mot boxes at phage middle promoters OS=Aeromonas phage 44RR2.8t GN=motA PE=4 SV=1 Length = 217
Score = 35.4 bits (80), Expect = 1.4 Identities = 27/111 (24%), Positives = 54/111 (48%), Gaps = 4/111 (3%) Frame = -2
Query: 457 SGVEDNAESLLLMHAIKLEVTTVDVKDN-ETSDNAMAE---LIVQQEVAIRHGDKPIKED 290 + + DNA + + A K +T ++ ++ E + NA+ +++++E+ + GD I + Sbjct: 16 ASISDNATQIFIQVAKKAFITVSEIAESVEMNKNAVYSNIGVMIKKELIEKSGDGYITTE 75
Query: 289 RLDGIIDLVDEKISKGERTEERDAKRKKQGALSLKRVRAEKLGLLHKRARL 137 D I+ E + EE ++KK G + + AE GL+ K + L Sbjct: 76 AGDAILVEAAEMWKAAQPVEEVKVEKKK-GTRKSREITAEMTGLMEKISAL 125
>tr|Q56EC9|Q56EC9_9CAUD MotA OS=Aeromonas phage 31 GN=motA PE=4 SV=1 Length = 217
Score = 35.4 bits (80), Expect = 1.4 Identities = 27/111 (24%), Positives = 54/111 (48%), Gaps = 4/111 (3%) Frame = -2
Query: 457 SGVEDNAESLLLMHAIKLEVTTVDVKDN-ETSDNAMAE---LIVQQEVAIRHGDKPIKED 290 + + DNA + + A K +T ++ ++ E + NA+ +++++E+ + GD I + Sbjct: 16 ASISDNATQIFIQVAKKAFITVSEIAESVEMNKNAVYSNIGVMIKKELIEKSGDGYITTE 75
Query: 289 RLDGIIDLVDEKISKGERTEERDAKRKKQGALSLKRVRAEKLGLLHKRARL 137 D I+ E + EE ++KK G + + AE GL+ K + L Sbjct: 76 AGDAILVEAAEMWKAAQPVEEVKVEKKK-GTRKSREITAEMTGLMEKISAL 125
>tr|A9PEI9|A9PEI9_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 244
Score = 35.0 bits (79), Expect = 1.9 Identities = 18/48 (37%), Positives = 26/48 (54%) Frame = -2
Query: 265 VDEKISKGERTEERDAKRKKQGALSLKRVRAEKLGLLHKRARLYTNQY 122 V E + K ++ EE A KKQ + K+ AE L+ RA+LY +Y Sbjct: 10 VPESVLKKQKREEEWALAKKQELAATKKKNAENRKLIFNRAKLYAKEY 57
>tr|A8MRH4|A8MRH4_ARATH Uncharacterized protein At2g01250.2 OS=Arabidopsis thaliana GN=At2g01250 PE=4 SV=1 Length = 184
Score = 35.0 bits (79), Expect = 1.9 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = -2
Query: 268 LVDEKISKGERTEERDAKRKKQGALSLKRVRAEKLGLLHKRARLYTNQYS 119 +V E + K + EE A KKQ + K+ AE L+ KRA Y+ +Y+ Sbjct: 7 VVPESVLKKRKREEEWALEKKQNVEAAKKKNAENRKLIFKRAEQYSKEYA 56
>tr|Q54BR4|Q54BR4_DICDI Putative uncharacterized protein OS=Dictyostelium discoideum GN=DDB_0191962 PE=4 SV=1 Length = 1784
Score = 35.0 bits (79), Expect = 1.9 Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 8/93 (8%) Frame = -2
Query: 394 TVDVKD--------NETSDNAMAELIVQQEVAIRHGDKPIKEDRLDGIIDLVDEKISKGE 239 T+D KD NE S+N + E I+H D+ ++E+ ++ + ++ + + + E Sbjct: 7 TIDSKDKSKKHKRVNEHSENEL------DEEEIKHSDEEVQEEEVEEVEEVEEVEEDEEE 60
Query: 238 RTEERDAKRKKQGALSLKRVRAEKLGLLHKRAR 140 R E ++ KRK+ K+ R EK L K + Sbjct: 61 RRERKERKRKE------KKERKEKRKLKKKEKK 87
>tr|A2F9I8|A2F9I8_TRIVA Putative uncharacterized protein OS=Trichomonas vaginalis G3 GN=TVAG_264660 PE=4 SV=1 Length = 1446
Score = 35.0 bits (79), Expect = 1.9 Identities = 18/61 (29%), Positives = 33/61 (54%) Frame = -2
Query: 388 DVKDNETSDNAMAELIVQQEVAIRHGDKPIKEDRLDGIIDLVDEKISKGERTEERDAKRK 209 D +DN+ D + +++ + GDK K+D+ D D+ D+K K ++ ++ D K K Sbjct: 604 DDEDNDEDDEIKEKKDKKKDKKEKDGDKKSKKDKNDKDDDVKDKKKKKDKKKDDEDKKSK 663
Query: 208 K 206 K Sbjct: 664 K 664
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