BP919065 |
Clone id |
YMU001_000120_G12 |
Library |
YMU01 |
Length |
355 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000120_G12. |
Accession |
BP919065 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL605Contig1 |
Sequence |
CTGGAAAACATTTCTATTGTAGCACACAGGGTGCCCCTCTTTGTCGACACCATGGAGGAA TGCCCATTTCTCAAAGTCTTCCTTACCCTCAATTTCCTCCTCTTCAATGCCGTCGGCATT AAACTCCTTCCTCCACTTCACAGTGCTCTTGAGCATGGAGAGTGTGTCATCGACTTTGAA GTGTCTCGCACGTAAGAACTTGAGCAGAAGGGCATCTGTCTTGTCATCTCCTTCATGGAT AGGGATCCCCCATACGTAAAAATTCTTGGGGCCTTCTTCAACAGGGGGTTCTTCAATTAA GATCTCTCTTTTCTCGGTGACGACGGAATCAGTAGAGTCAATGGGGGCTTCTTCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q56Z59 |
Definition |
sp|Q56Z59|PATL3_ARATH Patellin-3 OS=Arabidopsis thaliana |
Align length |
85 |
Score (bit) |
83.6 |
E-value |
3.0e-16 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q2Q0V7 |
Definition |
tr|Q2Q0V7|Q2Q0V7_CUCPE Patellin 1 OS=Cucurbita pepo |
Align length |
113 |
Score (bit) |
86.7 |
E-value |
6.0e-16 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919065|Adiantum capillus-veneris mRNA, clone: YMU001_000120_G12. (355 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q2Q0V7|Q2Q0V7_CUCPE Patellin 1 OS=Cucurbita pepo GN=PATL1 PE=... 87 6e-16 tr|B4FBC9|B4FBC9_MAIZE Putative uncharacterized protein OS=Zea m... 85 2e-15 tr|A7PKK5|A7PKK5_VITVI Chromosome chr7 scaffold_20, whole genome... 82 1e-14 tr|B8LQX3|B8LQX3_PICSI Putative uncharacterized protein OS=Picea... 81 2e-14 tr|Q5TKJ2|Q5TKJ2_ORYSJ Os05g0429400 protein OS=Oryza sativa subs... 79 1e-13 tr|B8AYI6|B8AYI6_ORYSI Putative uncharacterized protein OS=Oryza... 78 2e-13 tr|Q8RYZ1|Q8RYZ1_ORYSJ cDNA clone:J033015J08, full insert sequen... 77 3e-13 tr|A2WXH7|A2WXH7_ORYSI Putative uncharacterized protein OS=Oryza... 77 3e-13 tr|B6TVE3|B6TVE3_MAIZE Patellin-1 OS=Zea mays PE=2 SV=1 77 4e-13 tr|A7QFG3|A7QFG3_VITVI Chromosome chr8 scaffold_88, whole genome... 76 1e-12 tr|A5ASS0|A5ASS0_VITVI Putative uncharacterized protein OS=Vitis... 76 1e-12 tr|A7QLX0|A7QLX0_VITVI Chromosome chr18 scaffold_122, whole geno... 75 1e-12 tr|A7Q4T0|A7Q4T0_VITVI Chromosome chr10 scaffold_50, whole genom... 72 1e-11 tr|A5BW68|A5BW68_VITVI Putative uncharacterized protein OS=Vitis... 72 1e-11 tr|Q9LEN5|Q9LEN5_CICAR Putative uncharacterized protein (Fragmen... 72 2e-11 tr|B6TB19|B6TB19_MAIZE Patellin-5 OS=Zea mays PE=2 SV=1 72 2e-11 tr|Q652I7|Q652I7_ORYSJ Os06g0671800 protein OS=Oryza sativa subs... 70 4e-11 tr|A7QD42|A7QD42_VITVI Chromosome undetermined scaffold_80, whol... 70 4e-11 tr|A5BL92|A5BL92_VITVI Putative uncharacterized protein OS=Vitis... 70 4e-11 tr|A2YG28|A2YG28_ORYSI Putative uncharacterized protein OS=Oryza... 70 4e-11 tr|B7FL90|B7FL90_MEDTR Putative uncharacterized protein OS=Medic... 69 1e-10 tr|Q2PF01|Q2PF01_TRIPR Putative cytosolic factor OS=Trifolium pr... 67 5e-10 tr|A7Q1S9|A7Q1S9_VITVI Chromosome chr7 scaffold_44, whole genome... 64 3e-09 tr|A3A041|A3A041_ORYSJ Putative uncharacterized protein OS=Oryza... 64 3e-09 tr|Q76H02|Q76H02_SOLME Putative uncharacterized protein 5E08 (Fr... 64 5e-09 tr|Q5W6M0|Q5W6M0_ORYSJ Os05g0345100 protein OS=Oryza sativa subs... 63 7e-09 tr|A2Y3F5|A2Y3F5_ORYSI Putative uncharacterized protein OS=Oryza... 63 7e-09 tr|B6U0S4|B6U0S4_MAIZE Patellin-5 OS=Zea mays PE=2 SV=1 63 9e-09 tr|A5ASS1|A5ASS1_VITVI Putative uncharacterized protein OS=Vitis... 62 2e-08 tr|B6T219|B6T219_MAIZE Patellin-5 OS=Zea mays PE=2 SV=1 61 3e-08
>tr|Q2Q0V7|Q2Q0V7_CUCPE Patellin 1 OS=Cucurbita pepo GN=PATL1 PE=2 SV=1 Length = 604
Score = 86.7 bits (213), Expect = 6e-16 Identities = 48/113 (42%), Positives = 61/113 (53%) Frame = -2
Query: 354 EEAPIDSTDSVVTEKREILIEEPPVEEGPKNFYVWGIPIHEGDDKTDALLLKFLRARHFK 175 E AP V E E + PP E ++WGIP+ GD+++D +LLKFLRAR FK Sbjct: 238 ESAPSKEEAEVEVEAAEAVPPPPPEE-----VFIWGIPLL-GDERSDVILLKFLRARDFK 291
Query: 174 VDDTLSMLKSTVKWRKXXXXXXXXXXXXXXXXXXXKWAFLHGVDKEGHPVCYN 16 V D +M+K+TV+WRK F HGVD+EGHPVCYN Sbjct: 292 VKDAFTMIKNTVRWRKQFDIEALLDEDLGNQWDKV--VFSHGVDREGHPVCYN 342
>tr|B4FBC9|B4FBC9_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 620
Score = 85.1 bits (209), Expect = 2e-15 Identities = 42/93 (45%), Positives = 52/93 (55%) Frame = -2
Query: 294 EEPPVEEGPKNFYVWGIPIHEGDDKTDALLLKFLRARHFKVDDTLSMLKSTVKWRKXXXX 115 EEP E PK +WG+P+ D++TD +LLKFLRAR FKV + ++MLKS V WRK Sbjct: 268 EEPEAGE-PKEELIWGVPLAGDDERTDTVLLKFLRAREFKVKEAMAMLKSAVLWRKRFGI 326
Query: 114 XXXXXXXXXXXXXXXKWAFLHGVDKEGHPVCYN 16 F G D+EGHPVCYN Sbjct: 327 DELLLDADLGLRELEGVVFYRGADREGHPVCYN 359
>tr|A7PKK5|A7PKK5_VITVI Chromosome chr7 scaffold_20, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019216001 PE=4 SV=1 Length = 452
Score = 82.4 bits (202), Expect = 1e-14 Identities = 45/109 (41%), Positives = 63/109 (57%), Gaps = 3/109 (2%) Frame = -2
Query: 333 TDSVVTEKR---EILIEEPPVEEGPKNFYVWGIPIHEGDDKTDALLLKFLRARHFKVDDT 163 +D TEK+ E+ E ++G K ++WGI + E D+++D +LLKFLRAR FKV + Sbjct: 88 SDLPETEKKALEELKQLEKVDDDGAKTVFIWGIKLME-DERSDVILLKFLRARDFKVKEA 146
Query: 162 LSMLKSTVKWRKXXXXXXXXXXXXXXXXXXXKWAFLHGVDKEGHPVCYN 16 +M+K+TV+WRK F+HG DKEGHPVCYN Sbjct: 147 FAMIKNTVQWRKEFGIDQLMDEELGNDLEKV--VFMHGFDKEGHPVCYN 193
>tr|B8LQX3|B8LQX3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 592
Score = 81.3 bits (199), Expect = 2e-14 Identities = 48/125 (38%), Positives = 67/125 (53%), Gaps = 8/125 (6%) Frame = -2
Query: 351 EAPIDSTDSVVTEKREILIEEPPVEEGPKNF-----YVWGIPI--HEGDDKTDALLLKFL 193 EA +++V E+ + + E + F Y+WG+P+ +GD++TD +LLKFL Sbjct: 215 EATAVESEAVTGEQETVEVTVETFEAETEKFRATDVYLWGVPLLHTKGDERTDVILLKFL 274
Query: 192 RARHFKVDDTLSMLKSTVKWRKXXXXXXXXXXXXXXXXXXXKWAFLHGVDKEGHPVCYN- 16 RAR FKV + MLK+TV WRK A+++G DKEGHPVCYN Sbjct: 275 RARDFKVQEAFEMLKNTVLWRKSFKTDSILEEDFGNDLDGV--AYMNGYDKEGHPVCYNV 332
Query: 15 RNVFQ 1 VFQ Sbjct: 333 YGVFQ 337
>tr|Q5TKJ2|Q5TKJ2_ORYSJ Os05g0429400 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0048I21.5 PE=4 SV=1 Length = 585
Score = 78.6 bits (192), Expect = 1e-13 Identities = 46/124 (37%), Positives = 59/124 (47%), Gaps = 11/124 (8%) Frame = -2
Query: 354 EEAPIDSTDSVVTEKREILIEEPPV-----------EEGPKNFYVWGIPIHEGDDKTDAL 208 EE + T+ T K IEE V PK +WG+P+ D++TD + Sbjct: 199 EEKTVVVTEDEGTSKTVEAIEETVVVAAPAAAAEAEAAAPKEELIWGVPLTGDDERTDTV 258
Query: 207 LLKFLRARHFKVDDTLSMLKSTVKWRKXXXXXXXXXXXXXXXXXXXKWAFLHGVDKEGHP 28 LLKFLRAR FKV + ++MLK+ V WRK F G D+EGHP Sbjct: 259 LLKFLRAREFKVKEAMAMLKAAVLWRKRFGIDAVLAADLGLPELENV-VFYRGADREGHP 317
Query: 27 VCYN 16 VCYN Sbjct: 318 VCYN 321
>tr|B8AYI6|B8AYI6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_20058 PE=4 SV=1 Length = 583
Score = 78.2 bits (191), Expect = 2e-13 Identities = 46/124 (37%), Positives = 59/124 (47%), Gaps = 11/124 (8%) Frame = -2
Query: 354 EEAPIDSTDSVVTEKREILIEEPPVEEGP-----------KNFYVWGIPIHEGDDKTDAL 208 EE + T+ T K IEE V P K +WG+P+ D++TD + Sbjct: 197 EEKTVVVTEDEGTSKTVEAIEETVVVAAPAAAAEAEVAAPKEELIWGVPLTGDDERTDTV 256
Query: 207 LLKFLRARHFKVDDTLSMLKSTVKWRKXXXXXXXXXXXXXXXXXXXKWAFLHGVDKEGHP 28 LLKFLRAR FKV + ++MLK+ V WRK F G D+EGHP Sbjct: 257 LLKFLRAREFKVKEAMAMLKAAVLWRKRFGIDAVLAADLGLPELENV-VFYRGADREGHP 315
Query: 27 VCYN 16 VCYN Sbjct: 316 VCYN 319
>tr|Q8RYZ1|Q8RYZ1_ORYSJ cDNA clone:J033015J08, full insert sequence OS=Oryza sativa subsp. japonica GN=P0648C09.9 PE=2 SV=1 Length = 613
Score = 77.4 bits (189), Expect = 3e-13 Identities = 40/99 (40%), Positives = 53/99 (53%), Gaps = 2/99 (2%) Frame = -2
Query: 306 EILIEEPPVEEG--PKNFYVWGIPIHEGDDKTDALLLKFLRARHFKVDDTLSMLKSTVKW 133 E EP V+ P+ +WG+P+ D++TD +LLKFLRAR FKV + ++ML+S V W Sbjct: 253 EAAAPEPEVQAAAAPEPVLIWGVPLVGDDERTDTVLLKFLRAREFKVKEAMAMLRSAVLW 312
Query: 132 RKXXXXXXXXXXXXXXXXXXXKWAFLHGVDKEGHPVCYN 16 RK F G D+EGHPVCYN Sbjct: 313 RKRFGIESLLDADLALPELDSV-VFYRGADREGHPVCYN 350
>tr|A2WXH7|A2WXH7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_04628 PE=4 SV=1 Length = 610
Score = 77.4 bits (189), Expect = 3e-13 Identities = 40/99 (40%), Positives = 53/99 (53%), Gaps = 2/99 (2%) Frame = -2
Query: 306 EILIEEPPVEEG--PKNFYVWGIPIHEGDDKTDALLLKFLRARHFKVDDTLSMLKSTVKW 133 E EP V+ P+ +WG+P+ D++TD +LLKFLRAR FKV + ++ML+S V W Sbjct: 250 EAAAPEPEVQAAAAPEPVLIWGVPLVGDDERTDTVLLKFLRAREFKVKEAMAMLRSAVLW 309
Query: 132 RKXXXXXXXXXXXXXXXXXXXKWAFLHGVDKEGHPVCYN 16 RK F G D+EGHPVCYN Sbjct: 310 RKRFGIESLLDADLALPELDSV-VFYRGADREGHPVCYN 347
>tr|B6TVE3|B6TVE3_MAIZE Patellin-1 OS=Zea mays PE=2 SV=1 Length = 567
Score = 77.0 bits (188), Expect = 4e-13 Identities = 37/85 (43%), Positives = 48/85 (56%) Frame = -2
Query: 270 PKNFYVWGIPIHEGDDKTDALLLKFLRARHFKVDDTLSMLKSTVKWRKXXXXXXXXXXXX 91 P+ +WG+P+ D++TD +LLKFLRAR FKV + ++MLKS V WRK Sbjct: 223 PEPVLIWGVPLVGDDERTDTVLLKFLRAREFKVKEAMAMLKSAVLWRKRFGITSLLDADL 282
Query: 90 XXXXXXXKWAFLHGVDKEGHPVCYN 16 F G D+EGHPVCYN Sbjct: 283 GLTELENV-VFYRGTDREGHPVCYN 306
>tr|A7QFG3|A7QFG3_VITVI Chromosome chr8 scaffold_88, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037411001 PE=4 SV=1 Length = 417
Score = 75.9 bits (185), Expect = 1e-12 Identities = 34/80 (42%), Positives = 47/80 (58%) Frame = -2
Query: 255 VWGIPIHEGDDKTDALLLKFLRARHFKVDDTLSMLKSTVKWRKXXXXXXXXXXXXXXXXX 76 +WGIP+ GD++ D +LLKFLRAR F+V D+ +ML+ + WRK Sbjct: 78 MWGIPLLGGDERADVILLKFLRARDFRVADSFNMLEKCLAWRKEFGADDVAEEDLGFKEL 137
Query: 75 XXKWAFLHGVDKEGHPVCYN 16 A++HG D+E HPVCYN Sbjct: 138 EGVVAYMHGYDREEHPVCYN 157
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