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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919079
Clone id YMU001_000121_A06
Library
Length 570
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000121_A06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CACCTAAATTAGCCTCAATCCTTAATAAGCAGTTGTAATGAAATGTCTTGCAATTCCTTC
CCATGTACTCCATGAATCGCAACATGCGAATGCAATTTGCATGATGATTAATTTCTGCAT
TTTTCTCCACTAAAGCATCAAAGAGCTGATCAGTGCCCCTATAGCCCCCGTCTGCTCCTT
TCAGAAATGTTTCAGTGGCCTCTTTCAGATAACCCGATTGTAGAAGGTCATCAACAAAAG
ACAACCATGTAACCTGTCCACTTAAATTAAAATGCTCCATTGCAGCAAGAAGCTGCTCTC
CCTTTTGTTGATTTCCAACTAAAGCAAAGGAGCTCGCTACAGATGTGAAAGTTTCCTGTA
AGGGGATATGACCTGAGTTCAGCTCTCTTTTGAGAGCATGCAACGCCCCTTCGGCATCTC
CTGACCTTGAGTATGAAACAACAAGACCATGAAAACTCCTCGGACCTGGGTTCAATCCTA
CGGCCACCATATCTGCAAACGTTGCCTCTGCTCCTACAGGGTCACCTTCACGAGCTTTAA
CCATGAGATTTCCATAAACAAGAAGCGGAG
■■Homology search results ■■ -
sp_hit_id Q9FIX3
Definition sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana
Align length 185
Score (bit) 51.2
E-value 4.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919079|Adiantum capillus-veneris mRNA, clone:
YMU001_000121_A06.
         (570 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protei...    51   4e-06
sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protei...    51   4e-06
sp|Q9FGR7|PP426_ARATH Pentatricopeptide repeat-containing protei...    49   1e-05
sp|Q3ECH5|PP107_ARATH Pentatricopeptide repeat-containing protei...    48   3e-05
sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containi...    46   1e-04
sp|Q9LVA2|PP443_ARATH Pentatricopeptide repeat-containing protei...    45   3e-04
sp|Q9FKR3|PP404_ARATH Pentatricopeptide repeat-containing protei...    45   3e-04
sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containi...    45   3e-04
sp|O82178|PP186_ARATH Pentatricopeptide repeat-containing protei...    44   4e-04
sp|Q9LR67|PPR9_ARATH Pentatricopeptide repeat-containing protein...    44   6e-04
sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protei...    44   6e-04
sp|Q0WP85|PP150_ARATH Pentatricopeptide repeat-containing protei...    44   7e-04
sp|O64624|PP163_ARATH Pentatricopeptide repeat-containing protei...    42   0.002
sp|Q5SGE0|LPPRC_RAT Leucine-rich PPR motif-containing protein, m...    42   0.003
sp|Q9SA60|PPR6_ARATH Pentatricopeptide repeat-containing protein...    41   0.004
sp|Q94JX6|PP391_ARATH Pentatricopeptide repeat-containing protei...    41   0.004
sp|Q9LER0|PP381_ARATH Pentatricopeptide repeat-containing protei...    41   0.004
sp|Q9SAA6|PPR34_ARATH Pentatricopeptide repeat-containing protei...    41   0.005
sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protei...    40   0.008
sp|P0C896|PP209_ARATH Pentatricopeptide repeat-containing protei...    40   0.008
sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protei...    39   0.014
sp|Q9FZ19|PPR5_ARATH Putative pentatricopeptide repeat-containin...    39   0.014
sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protei...    39   0.014
sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containi...    39   0.014
sp|Q8S9D1|PP395_ARATH Pentatricopeptide repeat-containing protei...    39   0.018
sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protei...    39   0.018
sp|Q9M1D8|PP288_ARATH Pentatricopeptide repeat-containing protei...    39   0.018
sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protei...    39   0.018
sp|Q1PFA6|PP144_ARATH Pentatricopeptide repeat-containing protei...    39   0.018
sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protei...    39   0.018

>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein
           At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
          Length = 747

 Score = 51.2 bits (121), Expect = 4e-06
 Identities = 43/185 (23%), Positives = 76/185 (41%), Gaps = 3/185 (1%)
 Frame = -3

Query: 568 PLLVYGNLMVKA--REGDPVGAEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAEGALHA 395
           P L+  N+++    REG          +M   G +    +++ L+  Y + G+   AL  
Sbjct: 273 PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332

Query: 394 LKRELNSGHIPLQETFTSVASSFALVGNQQKGEQLLAAMEHFNLS-GQVTWLSFVDDLLQ 218
               L  G  P   T+TS+  S    GN  +  + L  M    L   + T+ + VD   Q
Sbjct: 333 HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392

Query: 217 SGYLKEATETFLKGADGGYRGTDQLFDALVEKNAEINHHANCIRMLRFMEYMGRNCKTFH 38
            GY+ EA     +  D G+  +   ++AL+  +       + I +L  M+  G +     
Sbjct: 393 KGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVS 452

Query: 37  YNCLL 23
           Y+ +L
Sbjct: 453 YSTVL 457



 Score = 36.6 bits (83), Expect = 0.090
 Identities = 28/130 (21%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
 Frame = -3

Query: 499 FADMVAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRELNSGHIPLQETFTSVASSFAL 320
           + +M+ VGL P   ++  L+ +Y   GD E AL      +  G +P   T++ + +    
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567

Query: 319 VGNQQKGEQLLAAMEH-FNLSGQVTWLSFVDDLLQSGYLKEATETFLKG--ADGGYRGTD 149
               ++ ++LL  + +  ++   VT+ + +++   S    ++  + +KG    G     D
Sbjct: 568 QSRTREAKRLLLKLFYEESVPSDVTYHTLIENC--SNIEFKSVVSLIKGFCMKGMMTEAD 625

Query: 148 QLFDALVEKN 119
           Q+F++++ KN
Sbjct: 626 QVFESMLGKN 635


>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein
           At4g11690 OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
          Length = 566

 Score = 51.2 bits (121), Expect = 4e-06
 Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
 Frame = -3

Query: 493 DMVAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRELNSGHIPLQETFTSVASSFALVG 314
           D+ + GL+P   +++ LV  + R GD  GA   +K     G  P + T+T +  +FA   
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSD 422

Query: 313 NQQKGEQLLAAMEHFNLSGQV-TWLSFVDDLLQSGYLKEATETFLKGADGGYRGTDQLFD 137
           N +K  QL  +ME   L   V T+   +      G + EA+               +LF 
Sbjct: 423 NMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEAS---------------RLFK 467

Query: 136 ALVEKNAEIN 107
           ++VEKN E N
Sbjct: 468 SMVEKNCEPN 477


>sp|Q9FGR7|PP426_ARATH Pentatricopeptide repeat-containing protein
           At5g50280, chloroplastic OS=Arabidopsis thaliana
           GN=EMB1006 PE=2 SV=1
          Length = 723

 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 1/164 (0%)
 Frame = -3

Query: 511 AEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRELNSGHIPLQETFTSVAS 332
           A   F  M  VGL P   S+  L+ +YS SG  E A  + +     G  P  ET+TSV  
Sbjct: 469 AADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLD 528

Query: 331 SFALVGNQQKGEQLLAAMEHFNLSG-QVTWLSFVDDLLQSGYLKEATETFLKGADGGYRG 155
           +F   G+  K  ++   M    + G ++T+ + +D   + G   EA +   + +  G + 
Sbjct: 529 AFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQP 588

Query: 154 TDQLFDALVEKNAEINHHANCIRMLRFMEYMGRNCKTFHYNCLL 23
           +   ++ L+   A     A   ++L+ M  +     +  Y+ ++
Sbjct: 589 SVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMI 632


>sp|Q3ECH5|PP107_ARATH Pentatricopeptide repeat-containing protein
           At1g66345, mitochondrial OS=Arabidopsis thaliana
           GN=At1g66345 PE=2 SV=1
          Length = 544

 Score = 48.1 bits (113), Expect = 3e-05
 Identities = 40/159 (25%), Positives = 62/159 (38%), Gaps = 1/159 (0%)
 Frame = -3

Query: 538 KAREGDPVGAEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRELNSGHIPL 359
           KA+EGD V A   F +M+  G +     +   V      GD + A   L     SG  P 
Sbjct: 314 KAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPY 373

Query: 358 QETFTSVASSFALVGNQQKGEQLLAAMEHFNLSGQVT-WLSFVDDLLQSGYLKEATETFL 182
            ETF  +   FA  G ++KG +    M    L    + +   V  + +   +  A E   
Sbjct: 374 DETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILT 433

Query: 181 KGADGGYRGTDQLFDALVEKNAEINHHANCIRMLRFMEY 65
           K  D G+   +  +  L+    E N     +++   MEY
Sbjct: 434 KSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEY 472


>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing
           protein At1g09680 OS=Arabidopsis thaliana GN=At1g09680
           PE=3 SV=1
          Length = 607

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 21/85 (24%), Positives = 42/85 (49%)
 Frame = -3

Query: 532 REGDPVGAEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRELNSGHIPLQE 353
           +EG  + AE    +M+  G+ P   ++  ++ ++ + GDA+     LK   + GH+P   
Sbjct: 462 KEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVV 521

Query: 352 TFTSVASSFALVGNQQKGEQLLAAM 278
           T+  + +    +G  +  + LL AM
Sbjct: 522 TYNVLLNGLCKLGQMKNADMLLDAM 546



 Score = 38.5 bits (88), Expect = 0.024
 Identities = 41/186 (22%), Positives = 74/186 (39%), Gaps = 4/186 (2%)
 Frame = -3

Query: 568 PLLVYGNLMVKA--REGDPVGAEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAEGALHA 395
           P +V  N +V    + GD V A      M+  GL P   ++  L+  + R GD E AL  
Sbjct: 378 PDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALE- 436

Query: 394 LKRELNSGHIPLQET-FTSVASSFALVGNQQKGEQLLAAMEHFNLS-GQVTWLSFVDDLL 221
           +++E++   I L    F+++       G     E+ L  M    +    VT+   +D   
Sbjct: 437 IRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFC 496

Query: 220 QSGYLKEATETFLKGADGGYRGTDQLFDALVEKNAEINHHANCIRMLRFMEYMGRNCKTF 41
           + G  +   +   +    G+  +   ++ L+    ++    N   +L  M  +G      
Sbjct: 497 KKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDI 556

Query: 40  HYNCLL 23
            YN LL
Sbjct: 557 TYNTLL 562



 Score = 37.4 bits (85), Expect = 0.053
 Identities = 35/188 (18%), Positives = 81/188 (43%), Gaps = 1/188 (0%)
 Frame = -3

Query: 562 LVYGNLMVKAREGDPVGAEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRE 383
           L++G+    +R G+    + ++  M++ GL P    ++ LV  + ++GD   A + +   
Sbjct: 351 LIHGH----SRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406

Query: 382 LNSGHIPLQETFTSVASSFALVGNQQKGEQLLAAMEHFNLS-GQVTWLSFVDDLLQSGYL 206
           +  G  P + T+T++   F   G+ +   ++   M+   +   +V + + V  + + G +
Sbjct: 407 IRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRV 466

Query: 205 KEATETFLKGADGGYRGTDQLFDALVEKNAEINHHANCIRMLRFMEYMGRNCKTFHYNCL 26
            +A     +    G +  D  +  +++   +        ++L+ M+  G       YN L
Sbjct: 467 IDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVL 526

Query: 25  LRIEANLG 2
           L     LG
Sbjct: 527 LNGLCKLG 534


>sp|Q9LVA2|PP443_ARATH Pentatricopeptide repeat-containing protein
           At5g62370 OS=Arabidopsis thaliana GN=At5g62370 PE=2 SV=1
          Length = 982

 Score = 45.1 bits (105), Expect = 3e-04
 Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
 Frame = -3

Query: 532 REGDPVGAEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRELNSGHIPLQE 353
           ++G  V AE TFA M+  G+ P   ++  ++ +Y+R+G  + A   ++  +     P   
Sbjct: 594 KQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSF 653

Query: 352 TFTSVASSFALVGNQQKGEQLLAAMEHFNLSGQVT-WLSFVDDLLQSGYLK 203
           T+T + S F  +G  +KG Q L  M    LS  V  + + +   L+ G  K
Sbjct: 654 TYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFK 704


>sp|Q9FKR3|PP404_ARATH Pentatricopeptide repeat-containing protein
           At5g38730 OS=Arabidopsis thaliana GN=At5g38730 PE=2 SV=1
          Length = 596

 Score = 45.1 bits (105), Expect = 3e-04
 Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 1/178 (0%)
 Frame = -3

Query: 550 NLMVKAREGDPVGAEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRELNSG 371
           N +VK R  D V     F  MV +G+      ++ LV + S+SGD E A   L      G
Sbjct: 176 NSLVKQRLTDTVWK--IFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKG 233

Query: 370 HIPLQETFTSVASSFALVGNQQKGEQLLAAMEHFNLSGQ-VTWLSFVDDLLQSGYLKEAT 194
             P   T+ ++ S +       +   +   ME   ++   VT+ SF+    + G ++EAT
Sbjct: 234 VFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREAT 293

Query: 193 ETFLKGADGGYRGTDQLFDALVEKNAEINHHANCIRMLRFMEYMGRNCKTFHYNCLLR 20
             F +  D         +  L++    +N     +R+   ME  G +     YN +LR
Sbjct: 294 RLFREIKD-DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILR 350


>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing
           protein At2g02150 OS=Arabidopsis thaliana GN=At2g02150
           PE=3 SV=1
          Length = 761

 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 4/162 (2%)
 Frame = -3

Query: 520 PVGAEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRELNSGHIPLQETFTS 341
           P+G E  + +M   GL P   S+  LV ++ + G  + A+         G +P + T+TS
Sbjct: 349 PIGLEF-YREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTS 407

Query: 340 VASSFALVGNQ----QKGEQLLAAMEHFNLSGQVTWLSFVDDLLQSGYLKEATETFLKGA 173
           +  +   +GN     + G ++L     +N+   VT+ + +D L  +  +KEA E F K  
Sbjct: 408 LIDANCKIGNLSDAFRLGNEMLQVGVEWNV---VTYTALIDGLCDAERMKEAEELFGKMD 464

Query: 172 DGGYRGTDQLFDALVEKNAEINHHANCIRMLRFMEYMGRNCK 47
             G       ++AL+    +  +    + +L   E  GR  K
Sbjct: 465 TAGVIPNLASYNALIHGFVKAKNMDRALELLN--ELKGRGIK 504



 Score = 32.3 bits (72), Expect = 1.7
 Identities = 33/179 (18%), Positives = 63/179 (35%), Gaps = 1/179 (0%)
 Frame = -3

Query: 535 AREGDPVGAEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRELNSGHIPLQ 356
           A+ G     +  F DM+  G  P   +++ ++    + GD E A    +     G +P  
Sbjct: 238 AKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDT 297

Query: 355 ETFTSVASSFALVGNQQKGEQLLAAMEHFNLSGQV-TWLSFVDDLLQSGYLKEATETFLK 179
            T+ S+   F  VG           M+       V T+ + ++   + G L    E + +
Sbjct: 298 VTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYRE 357

Query: 178 GADGGYRGTDQLFDALVEKNAEINHHANCIRMLRFMEYMGRNCKTFHYNCLLRIEANLG 2
               G +     +  LV+   +       I+    M  +G     + Y  L+     +G
Sbjct: 358 MKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIG 416


>sp|O82178|PP186_ARATH Pentatricopeptide repeat-containing protein
           At2g35130 OS=Arabidopsis thaliana GN=At2g35130 PE=2 SV=1
          Length = 591

 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 34/134 (25%), Positives = 67/134 (50%), Gaps = 3/134 (2%)
 Frame = -3

Query: 550 NLMVKA--REGDPVGAEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRELN 377
           N+MV A  R G    AEA F +M  +G+ P  +S   L+ +YS++ D       +K    
Sbjct: 373 NIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSE 432

Query: 376 SGHIPLQETFTSVASSFALVGNQQKGEQLLAAMEHFNLSGQVTWLSFVDDLL-QSGYLKE 200
           +G  P      S+ + +  +G   K E++LA ME+   +  ++  + + ++  ++G+L+ 
Sbjct: 433 NGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLER 492

Query: 199 ATETFLKGADGGYR 158
             E F++  +  +R
Sbjct: 493 IEELFVELKEKNFR 506



 Score = 35.4 bits (80), Expect = 0.20
 Identities = 40/183 (21%), Positives = 69/183 (37%), Gaps = 5/183 (2%)
 Frame = -3

Query: 535 AREGDPVGAEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRELNSGHIPLQ 356
           AREG    AE  F  +   GL P    ++ L+ SYSR+G   GA        + G  P +
Sbjct: 310 AREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDR 369

Query: 355 ETFTSVASSFALVGNQQKGEQLLAAMEHFNLSGQVTWLSFVDDLLQSGYLKEATETFLKG 176
            ++  +  ++   G     E +   M+   ++   T  S +  LL S Y K    T  + 
Sbjct: 370 ASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIA--PTMKSHM--LLLSAYSKARDVTKCEA 425

Query: 175 -----ADGGYRGTDQLFDALVEKNAEINHHANCIRMLRFMEYMGRNCKTFHYNCLLRIEA 11
                ++ G      + ++++     +       ++L  ME          YN L+ I  
Sbjct: 426 IVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYG 485

Query: 10  NLG 2
             G
Sbjct: 486 KAG 488



 Score = 34.7 bits (78), Expect = 0.34
 Identities = 25/136 (18%), Positives = 53/136 (38%), Gaps = 1/136 (0%)
 Frame = -3

Query: 427 RSGDAEGALHALKRELNSGHIPLQETFTSVASSFALVGNQQKGEQLLAAMEHFNLSGQV- 251
           R G+ E A+   +R       P  ET+  + + +          +L   M        + 
Sbjct: 241 RKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNIC 300

Query: 250 TWLSFVDDLLQSGYLKEATETFLKGADGGYRGTDQLFDALVEKNAEINHHANCIRMLRFM 71
           T+ + V+   + G  ++A E F +  + G      +++AL+E  +   +      +   M
Sbjct: 301 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 360

Query: 70  EYMGRNCKTFHYNCLL 23
           ++MG       YN ++
Sbjct: 361 QHMGCEPDRASYNIMV 376


>sp|Q9LR67|PPR9_ARATH Pentatricopeptide repeat-containing protein
           At1g03560, mitochondrial OS=Arabidopsis thaliana
           GN=At1g03560 PE=2 SV=1
          Length = 660

 Score = 43.9 bits (102), Expect = 6e-04
 Identities = 37/166 (22%), Positives = 69/166 (41%), Gaps = 1/166 (0%)
 Frame = -3

Query: 562 LVYGNLMVKAREGDPVGAEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRE 383
           LV G L    +EG        F +M+  G  P    +  L+  Y++SG  E A+  L R 
Sbjct: 332 LVIGGL---CKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 388

Query: 382 LNSGHIPLQETFTSVASSFALVGNQQKGEQLLAAMEHFNLS-GQVTWLSFVDDLLQSGYL 206
           ++ G  P   T++ V +     G  ++            L+   + + S +D L ++G +
Sbjct: 389 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRV 448

Query: 205 KEATETFLKGADGGYRGTDQLFDALVEKNAEINHHANCIRMLRFME 68
            EA   F + ++ G       ++AL++   +       I + + ME
Sbjct: 449 DEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRME 494
tr_hit_id A9RZV2
Definition tr|A9RZV2|A9RZV2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 178
Score (bit) 181.0
E-value 3.0e-44
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919079|Adiantum capillus-veneris mRNA, clone:
YMU001_000121_A06.
         (570 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RZV2|A9RZV2_PHYPA Predicted protein OS=Physcomitrella paten...   181   3e-44
tr|Q8LNP4|Q8LNP4_ORYSJ Putative chloroplast RNA processing prote...   170   6e-41
tr|Q8H902|Q8H902_ORYSJ Putative DNA binding domain containing pr...   170   6e-41
tr|A7PZ38|A7PZ38_VITVI Chromosome chr4 scaffold_39, whole genome...   169   8e-41
tr|A5ARW7|A5ARW7_VITVI Putative uncharacterized protein OS=Vitis...   165   2e-39
tr|Q9M8Y2|Q9M8Y2_ARATH T6K12.12 protein OS=Arabidopsis thaliana ...   164   2e-39
tr|B8BHB8|B8BHB8_ORYSI Putative uncharacterized protein OS=Oryza...   118   3e-25
tr|A3C5H7|A3C5H7_ORYSJ Putative uncharacterized protein OS=Oryza...   118   3e-25
tr|A3C5H1|A3C5H1_ORYSJ Putative uncharacterized protein OS=Oryza...    72   3e-11
tr|Q8LNR5|Q8LNR5_ORYSJ Putative stress inducible protein OS=Oryz...    71   4e-11
tr|Q8LNR2|Q8LNR2_ORYSJ Putative uncharacterized protein OSJNBa00...    71   4e-11
tr|Q337M8|Q337M8_ORYSJ Tetratricopeptide repeat, putative, expre...    71   4e-11
tr|Q109L1|Q109L1_ORYSJ PsbP family protein, expressed OS=Oryza s...    71   4e-11
tr|Q109L0|Q109L0_ORYSJ Os10g0461100 protein OS=Oryza sativa subs...    71   4e-11
tr|Q109K8|Q109K8_ORYSJ cDNA clone:J013158D14, full insert sequen...    71   4e-11
tr|Q0IX76|Q0IX76_ORYSJ Os10g0460900 protein OS=Oryza sativa subs...    70   6e-11
tr|A2Z876|A2Z876_ORYSI Putative uncharacterized protein OS=Oryza...    63   1e-08
tr|Q109K9|Q109K9_ORYSJ PsbP family protein, expressed OS=Oryza s...    61   4e-08
tr|Q259U0|Q259U0_ORYSA H0913C04.4 protein OS=Oryza sativa GN=H09...    59   2e-07
tr|A2XZ48|A2XZ48_ORYSI Putative uncharacterized protein OS=Oryza...    59   2e-07
tr|Q0J8W3|Q0J8W3_ORYSJ Os04g0684500 protein OS=Oryza sativa subs...    58   3e-07
tr|A3AYT1|A3AYT1_ORYSJ Putative uncharacterized protein OS=Oryza...    58   3e-07
tr|Q1G1I8|Q1G1I8_MAIZE Pentatricopeptide repeat protein OS=Zea m...    57   9e-07
tr|A9T9D8|A9T9D8_PHYPA Predicted protein OS=Physcomitrella paten...    56   2e-06
tr|A9SC54|A9SC54_PHYPA Predicted protein (Fragment) OS=Physcomit...    56   2e-06
tr|B6U1C3|B6U1C3_MAIZE Putative uncharacterized protein OS=Zea m...    55   2e-06
tr|B8B2Y8|B8B2Y8_ORYSI Putative uncharacterized protein OS=Oryza...    53   1e-05
tr|A3B8H0|A3B8H0_ORYSJ Putative uncharacterized protein OS=Oryza...    53   1e-05
tr|Q75HY8|Q75HY8_ORYSJ Putative uncharacterized protein OSJNBb00...    53   1e-05
tr|B8AX70|B8AX70_ORYSI Putative uncharacterized protein OS=Oryza...    53   1e-05

>tr|A9RZV2|A9RZV2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_207299 PE=4 SV=1
          Length = 803

 Score =  181 bits (459), Expect = 3e-44
 Identities = 86/178 (48%), Positives = 120/178 (67%)
 Frame = -3

Query: 547 LMVKAREGDPVGAEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRELNSGH 368
           +M KAR+ D  G E     M   GL+ GPR+++GL V+Y+RSGD EGA+ ALK+ + +G 
Sbjct: 6   IMEKARKADVEGVEEALTGMSLAGLDAGPRAYYGLTVAYARSGDPEGAVQALKKAVQAGV 65

Query: 367 IPLQETFTSVASSFALVGNQQKGEQLLAAMEHFNLSGQVTWLSFVDDLLQSGYLKEATET 188
            PL E+  +    +   G  Q+G+++LAAME  N + +V WL+ V++LL + YL+EA E 
Sbjct: 66  NPLPESMLACVRLYGSTGQPQRGKEILAAMEKLNYNPRVAWLTLVEELLNNSYLQEANEV 125

Query: 187 FLKGADGGYRGTDQLFDALVEKNAEINHHANCIRMLRFMEYMGRNCKTFHYNCLLRIE 14
           +++G +GG RGTD LFD +VE N+ I  HANCI +LR MEY GR   TFHYNCLLR +
Sbjct: 126 YIEGLEGGLRGTDVLFDRIVEANSIIGDHANCISVLRLMEYGGRMSTTFHYNCLLRAQ 183


>tr|Q8LNP4|Q8LNP4_ORYSJ Putative chloroplast RNA processing protein
           OS=Oryza sativa subsp. japonica GN=OSJNBa0042E19.39 PE=4
           SV=1
          Length = 730

 Score =  170 bits (430), Expect = 6e-41
 Identities = 81/182 (44%), Positives = 118/182 (64%)
 Frame = -3

Query: 547 LMVKAREGDPVGAEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRELNSGH 368
           L  +AR  D  G      DMVA GL+PGPRSFHGLV ++  +GDAEGA+ +L+REL+SG 
Sbjct: 87  LAERARAADAAGVADAIYDMVAAGLSPGPRSFHGLVAAHVLAGDAEGAMQSLRRELSSGV 146

Query: 367 IPLQETFTSVASSFALVGNQQKGEQLLAAMEHFNLSGQVTWLSFVDDLLQSGYLKEATET 188
            PL ETF ++   FA  G   +G ++LAAME +    +  WL  V++L+ + YL++A   
Sbjct: 147 RPLHETFVALVRVFAKKGLATRGMEILAAMERYKYDIRKAWLILVEELVNNNYLEDANTV 206

Query: 187 FLKGADGGYRGTDQLFDALVEKNAEINHHANCIRMLRFMEYMGRNCKTFHYNCLLRIEAN 8
           FLKG +GG +GTD+++D L+E++ +   H+N + +   ME  GR   TFH+NCLL ++A 
Sbjct: 207 FLKGTEGGLQGTDEIYDLLIEEDCKAGDHSNALTVAYKMEASGRMATTFHFNCLLSVQAT 266

Query: 7   LG 2
            G
Sbjct: 267 CG 268


>tr|Q8H902|Q8H902_ORYSJ Putative DNA binding domain containing
           protein (SAP domain containing protein, expressed)
           OS=Oryza sativa subsp. japonica GN=OSJNBa0071K18.11 PE=4
           SV=1
          Length = 898

 Score =  170 bits (430), Expect = 6e-41
 Identities = 81/182 (44%), Positives = 118/182 (64%)
 Frame = -3

Query: 547 LMVKAREGDPVGAEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRELNSGH 368
           L  +AR  D  G      DMVA GL+PGPRSFHGLV ++  +GDAEGA+ +L+REL+SG 
Sbjct: 87  LAERARAADAAGVADAIYDMVAAGLSPGPRSFHGLVAAHVLAGDAEGAMQSLRRELSSGV 146

Query: 367 IPLQETFTSVASSFALVGNQQKGEQLLAAMEHFNLSGQVTWLSFVDDLLQSGYLKEATET 188
            PL ETF ++   FA  G   +G ++LAAME +    +  WL  V++L+ + YL++A   
Sbjct: 147 RPLHETFVALVRVFAKKGLATRGMEILAAMERYKYDIRKAWLILVEELVNNNYLEDANTV 206

Query: 187 FLKGADGGYRGTDQLFDALVEKNAEINHHANCIRMLRFMEYMGRNCKTFHYNCLLRIEAN 8
           FLKG +GG +GTD+++D L+E++ +   H+N + +   ME  GR   TFH+NCLL ++A 
Sbjct: 207 FLKGTEGGLQGTDEIYDLLIEEDCKAGDHSNALTVAYKMEASGRMATTFHFNCLLSVQAT 266

Query: 7   LG 2
            G
Sbjct: 267 CG 268


>tr|A7PZ38|A7PZ38_VITVI Chromosome chr4 scaffold_39, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00026730001
           PE=4 SV=1
          Length = 818

 Score =  169 bits (429), Expect = 8e-41
 Identities = 81/182 (44%), Positives = 119/182 (65%)
 Frame = -3

Query: 547 LMVKAREGDPVGAEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRELNSGH 368
           LM +AR  D  G    F DMVA GL+PGPRSFHGL+VS   +GD EGA+ +L+REL++G 
Sbjct: 72  LMERARSADTAGVSEVFYDMVAAGLSPGPRSFHGLIVSTVLNGDDEGAMQSLRRELSAGL 131

Query: 367 IPLQETFTSVASSFALVGNQQKGEQLLAAMEHFNLSGQVTWLSFVDDLLQSGYLKEATET 188
            PL ETF ++   F   G   +G ++LAAME  N   +  WL  V++L++  +L++A + 
Sbjct: 132 RPLHETFVALIRLFGSKGYATRGLEILAAMEKLNFDIRKAWLVLVEELVRHNHLEDANKV 191

Query: 187 FLKGADGGYRGTDQLFDALVEKNAEINHHANCIRMLRFMEYMGRNCKTFHYNCLLRIEAN 8
           FLKGA GG R T++L+D L+E++ ++  H+N + +   ME  GR   T+H+NCLL ++A 
Sbjct: 192 FLKGAKGGLRATNELYDLLIEEDCKVGDHSNALTIAYEMEAAGRMATTYHFNCLLSVQAT 251

Query: 7   LG 2
            G
Sbjct: 252 CG 253


>tr|A5ARW7|A5ARW7_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_023135 PE=4 SV=1
          Length = 298

 Score =  165 bits (417), Expect = 2e-39
 Identities = 79/178 (44%), Positives = 116/178 (65%)
 Frame = -3

Query: 547 LMVKAREGDPVGAEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRELNSGH 368
           LM  AR  D  G    F DMVA GL+PGPRSFHGL+VS   +GD EGA+ +L+REL++G 
Sbjct: 72  LMEXARSADTAGVSEVFYDMVAAGLSPGPRSFHGLIVSTVLNGDDEGAMQSLRRELSAGL 131

Query: 367 IPLQETFTSVASSFALVGNQQKGEQLLAAMEHFNLSGQVTWLSFVDDLLQSGYLKEATET 188
            PL ETF ++   F   G   +G ++LAAME  N   +  WL  V++L++  +L++A + 
Sbjct: 132 RPLHETFVALIRLFGSKGYATRGLEILAAMEKLNFDIRKAWLVLVEELVRHNHLEDANKV 191

Query: 187 FLKGADGGYRGTDQLFDALVEKNAEINHHANCIRMLRFMEYMGRNCKTFHYNCLLRIE 14
           FLKGA GG R T++L+D L+E++ ++  H+N + +   ME  GR   T+H+NCLL ++
Sbjct: 192 FLKGAKGGLRATNELYDLLIEEDCKVGDHSNALTIAYEMEAAGRMATTYHFNCLLSVQ 249


>tr|Q9M8Y2|Q9M8Y2_ARATH T6K12.12 protein OS=Arabidopsis thaliana
           GN=At3g04260 PE=4 SV=1
          Length = 913

 Score =  164 bits (416), Expect = 2e-39
 Identities = 78/182 (42%), Positives = 117/182 (64%)
 Frame = -3

Query: 547 LMVKAREGDPVGAEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRELNSGH 368
           LM +AR  D  G      DM+A GL+PGPRSFHGLVV+++ +GD +GA+H+L++EL +G 
Sbjct: 80  LMERARNRDTSGVSEVIYDMIAAGLSPGPRSFHGLVVAHALNGDEQGAMHSLRKELGAGQ 139

Query: 367 IPLQETFTSVASSFALVGNQQKGEQLLAAMEHFNLSGQVTWLSFVDDLLQSGYLKEATET 188
            PL ET  ++       GN  +G ++LAAME      +  WL  V++L++  +L++A + 
Sbjct: 140 RPLPETMIALVRLSGSKGNATRGLEILAAMEKLKYDIRQAWLILVEELMRINHLEDANKV 199

Query: 187 FLKGADGGYRGTDQLFDALVEKNAEINHHANCIRMLRFMEYMGRNCKTFHYNCLLRIEAN 8
           FLKGA GG R TDQL+D ++E++ +   H+N + +   ME  GR   TFH+NCLL ++A 
Sbjct: 200 FLKGARGGMRATDQLYDLMIEEDCKAGDHSNALDISYEMEAAGRMATTFHFNCLLSVQAT 259

Query: 7   LG 2
            G
Sbjct: 260 CG 261


>tr|B8BHB8|B8BHB8_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_33922 PE=4 SV=1
          Length = 836

 Score =  118 bits (295), Expect = 3e-25
 Identities = 54/134 (40%), Positives = 86/134 (64%)
 Frame = -3

Query: 403 LHALKRELNSGHIPLQETFTSVASSFALVGNQQKGEQLLAAMEHFNLSGQVTWLSFVDDL 224
           + +L+REL+SG  PL ETF ++   FA  G   +G ++LAAME +    +  WL  V++L
Sbjct: 72  MQSLRRELSSGVRPLHETFVALVRVFAKKGLATRGMEILAAMERYKYDIRKAWLILVEEL 131

Query: 223 LQSGYLKEATETFLKGADGGYRGTDQLFDALVEKNAEINHHANCIRMLRFMEYMGRNCKT 44
           + + YL++A   FLKG +GG +GTD+++D L+E++ +   H+N + +   ME  GR   T
Sbjct: 132 VNNNYLEDANTVFLKGTEGGLQGTDEIYDLLIEEDCKAGDHSNALTVAYKMEASGRMATT 191

Query: 43  FHYNCLLRIEANLG 2
           FH+NCLL ++A  G
Sbjct: 192 FHFNCLLSVQATCG 205


>tr|A3C5H7|A3C5H7_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_030549 PE=4 SV=1
          Length = 764

 Score =  118 bits (295), Expect = 3e-25
 Identities = 54/134 (40%), Positives = 86/134 (64%)
 Frame = -3

Query: 403 LHALKRELNSGHIPLQETFTSVASSFALVGNQQKGEQLLAAMEHFNLSGQVTWLSFVDDL 224
           + +L+REL+SG  PL ETF ++   FA  G   +G ++LAAME +    +  WL  V++L
Sbjct: 1   MQSLRRELSSGVRPLHETFVALVRVFAKKGLATRGMEILAAMERYKYDIRKAWLILVEEL 60

Query: 223 LQSGYLKEATETFLKGADGGYRGTDQLFDALVEKNAEINHHANCIRMLRFMEYMGRNCKT 44
           + + YL++A   FLKG +GG +GTD+++D L+E++ +   H+N + +   ME  GR   T
Sbjct: 61  VNNNYLEDANTVFLKGTEGGLQGTDEIYDLLIEEDCKAGDHSNALTVAYKMEASGRMATT 120

Query: 43  FHYNCLLRIEANLG 2
           FH+NCLL ++A  G
Sbjct: 121 FHFNCLLSVQATCG 134


>tr|A3C5H1|A3C5H1_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_030543 PE=4 SV=1
          Length = 364

 Score = 71.6 bits (174), Expect = 3e-11
 Identities = 38/73 (52%), Positives = 51/73 (69%)
 Frame = -3

Query: 487 VAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRELNSGHIPLQETFTSVASSFALVGNQ 308
           VA G +PGPRSFHGLV+S    G+AEGA+ +L+REL+SG  PL+E F ++   FA     
Sbjct: 65  VAAGRSPGPRSFHGLVLS----GNAEGAMQSLRRELSSGMHPLRENFVALVHVFAKNDLT 120

Query: 307 QKGEQLLAAMEHF 269
            KG ++LAAME +
Sbjct: 121 TKGMEILAAMERY 133


>tr|Q8LNR5|Q8LNR5_ORYSJ Putative stress inducible protein OS=Oryza
           sativa subsp. japonica GN=OSJNBa0042E19.1 PE=4 SV=1
          Length = 380

 Score = 71.2 bits (173), Expect = 4e-11
 Identities = 38/78 (48%), Positives = 53/78 (67%)
 Frame = -3

Query: 487 VAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRELNSGHIPLQETFTSVASSFALVGNQ 308
           VA G +PGPRSFHGLV+S    G+AEGA+ +L+REL+SG  PL+E F ++   FA     
Sbjct: 65  VAAGRSPGPRSFHGLVLS----GNAEGAMQSLRRELSSGMHPLRENFVALVHVFAKNDLT 120

Query: 307 QKGEQLLAAMEHFNLSGQ 254
            KG ++LAAME  ++  +
Sbjct: 121 TKGMEILAAMERQSIKSE 138