BP919084
Clone id YMU001_000121_A11
Library
Length 430
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000121_A11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AAAATCCACTAAGGTAAGGGAAGGAGGACCCTCCTCCTGAAGCGCTGCAAACTTAAGCCA
GCATGCACCTATCACTAAACAACAAAGAAAGTTAATTGAAAATAAGAGTTAAGTGGATCA
TGGGTTTTAGCCATGGAATCTGCCTTAAGGATAGGAAATCCACAAGTCATCGATACCTAA
GTCTGTCGGAAGCATGCACAGATTTGTCAAGGGCAAGCAAGAGTTAAGGCAAATAGCTTT
TGTCTATTCGATTTCTTACTAGAAGCCTAATGATTGTATAACTTCAAGGAATACGGATAG
AGGGATTTGAACCCCCACGACTGAGTAAGGTCACCAGAACCTAAACCTGGCATGTCTGCC
AATTCCATCATATCCGCACATTGATTCTTACTTCGAAATGTTCTTATTGAGTTGGAAAAC
CAACCCTTTT
■■Homology search results ■■ -
sp_hit_id Q70XV6
Definition sp|Q70XV6|YCF1_AMBTC Putative membrane protein ycf1 OS=Amborella trichopoda
Align length 27
Score (bit) 28.9
E-value 9.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919084|Adiantum capillus-veneris mRNA, clone:
YMU001_000121_A11.
(430 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q70XV6|YCF1_AMBTC Putative membrane protein ycf1 OS=Amborella... 29 9.1
sp|Q9P6N5|DS1PP_SCHPO Dihydrosphingosine 1-phosphate phosphatase... 29 9.1
sp|Q8N1N5|CRPAK_HUMAN Cysteine-rich PAK1 inhibitor OS=Homo sapie... 29 9.1

>sp|Q70XV6|YCF1_AMBTC Putative membrane protein ycf1 OS=Amborella
trichopoda GN=ycf1 PE=3 SV=2
Length = 1794

Score = 28.9 bits (63), Expect = 9.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3

Query: 314 GFKSLYPYSLKLYNH*ASSKKSNRQKL 234
G K LYP LYNH S+ + R K+
Sbjct: 430 GMKELYPKDKNLYNHWVSTNEQKRDKV 456


>sp|Q9P6N5|DS1PP_SCHPO Dihydrosphingosine 1-phosphate phosphatase
C823.11 OS=Schizosaccharomyces pombe GN=SPAC823.11 PE=2
SV=1
Length = 411

Score = 28.9 bits (63), Expect = 9.1
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -3

Query: 140 DSMAKTHDPLNSYFQLTFFV 81
+S++ HD LNSYF L FFV
Sbjct: 283 ESLSHLHDNLNSYFLLKFFV 302


>sp|Q8N1N5|CRPAK_HUMAN Cysteine-rich PAK1 inhibitor OS=Homo sapiens
GN=CRIPAK PE=1 SV=1
Length = 446

Score = 28.9 bits (63), Expect = 9.1
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -3

Query: 230 ALTLACP*QICACFRQT*VSMTCGFPILKADSMAKTHDPLNSYFQLTFFV 81
A + CP + AC + C FP+L A+S A T + F + F+V
Sbjct: 384 ACSHTCPCGVPACSHKALAWWFCRFPVLPAESDAVTVHSTHGGFLIRFYV 433


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919084|Adiantum capillus-veneris mRNA, clone:
YMU001_000121_A11.
(430 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******