BP919085
Clone id YMU001_000121_A12
Library
Length 447
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000121_A12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TGCAGAGATTACATGATTTGGGTGTACTGTGGTGATAGGTAGAGTGCAGACAAAAGTCAT
AATCTCAATGATAAGGTTCAAGGAGAGGGCTTGCAAAGCACATGAATCATTCTCACATCT
GAAAACAAGAGCTCCCATGGAAAATACTTGCCCAATCTTGGCATTGGACATGTGCATCCA
AAACGTACGCACTTTTATTCTCTGTAGGAATATTGCATCGCTTGTGGGGAACCTCAAAGG
GAGGGTAAACCCGCGAAGTGCAAAATGTGGCTCAAGTCCAAACACCAAAGTGGAGCAAGC
CACAATGTACACCTAAAATGATCCAAAGAAAAGCTTAAAAGTTGGTTGAGAGATTTGTAG
AATATCATATACAAGATTTGGATAGTACTCGGAAGAGTTGTGTGAAAGTAAGGACAGGCA
TGGAATAGGTGTGTTACAAGGAAACTC
■■Homology search results ■■ -
sp_hit_id Q54BD4
Definition sp|Q54BD4|STATC_DICDI Signal transducer and activator of transcription C OS=Dictyostelium discoideum
Align length 52
Score (bit) 32.3
E-value 0.93
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919085|Adiantum capillus-veneris mRNA, clone:
YMU001_000121_A12.
(447 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q54BD4|STATC_DICDI Signal transducer and activator of transcr... 32 0.93
sp|Q8TE60|ATS18_HUMAN A disintegrin and metalloproteinase with t... 31 2.7
sp|Q76P29|IMAB_DICDI Importin subunit alpha-B OS=Dictyostelium d... 30 6.0
sp|Q5T1A1|DCST2_HUMAN DC-STAMP domain-containing protein 2 OS=Ho... 29 8.0

>sp|Q54BD4|STATC_DICDI Signal transducer and activator of
transcription C OS=Dictyostelium discoideum GN=dstC PE=1
SV=1
Length = 931

Score = 32.3 bits (72), Expect = 0.93
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +3

Query: 276 VQTPKWSKPQCTPKMIQRKA*KLVE--RFVEYHIQDLDSTRKSCVKVRTGME 425
V+ + SK +PK I+ + + E R +YH++ L+ TRK+ V ++ GM+
Sbjct: 628 VENQQGSKTSSSPKTIETEVVSMDETNRLAKYHLKFLNGTRKNPVTLKFGMQ 679


>sp|Q8TE60|ATS18_HUMAN A disintegrin and metalloproteinase with
thrombospondin motifs 18 OS=Homo sapiens GN=ADAMTS18
PE=2 SV=2
Length = 1221

Score = 30.8 bits (68), Expect = 2.7
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = -2

Query: 290 LWCLDLSHILHFAGLPSL*GSPQAMQYSYRE*KCVRFGCTCPMPRLGKYFPW 135
LWC + H +P+ G+ + R+ +CV+FG P P G++ W
Sbjct: 544 LWCHRVGHRCETKFMPAAEGTVCGLSMWCRQGQCVKFGELGPRPIHGQWSAW 595


>sp|Q76P29|IMAB_DICDI Importin subunit alpha-B OS=Dictyostelium
discoideum GN=DDB_G0272318 PE=3 SV=1
Length = 516

Score = 29.6 bits (65), Expect = 6.0
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = -3

Query: 310 VHCGLLHFGVWT*ATFCTSRVYPPFEVPHKRCNIPTENKSAYVLDAHV 167
+ ++ WT + FC + PPFE+ R ++P K Y D V
Sbjct: 210 IKVSMVRNATWTLSNFCRGKPQPPFEI--VRASLPVLAKLIYYQDEEV 255


>sp|Q5T1A1|DCST2_HUMAN DC-STAMP domain-containing protein 2 OS=Homo
sapiens GN=DCST2 PE=2 SV=2
Length = 773

Score = 29.3 bits (64), Expect = 8.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1

Query: 178 PKRTHFYSL*EYCIACGEPQREG 246
P +HF+ YC+ CG+PQ EG
Sbjct: 587 PFVSHFWLHQAYCLGCGQPQDEG 609


tr_hit_id A8U6F6
Definition tr|A8U6F6|A8U6F6_9LACT Putative uncharacterized protein OS=Carnobacterium sp. AT7
Align length 62
Score (bit) 34.3
E-value 3.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919085|Adiantum capillus-veneris mRNA, clone:
YMU001_000121_A12.
(447 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A8U6F6|A8U6F6_9LACT Putative uncharacterized protein OS=Carno... 34 3.2

>tr|A8U6F6|A8U6F6_9LACT Putative uncharacterized protein
OS=Carnobacterium sp. AT7 GN=CAT7_06031 PE=4 SV=1
Length = 192

Score = 34.3 bits (77), Expect = 3.2
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -1

Query: 336 KLFFGSF*VYIVACSTLVFGLEPHFALRGFTLPLRFPTSDAIFLQRIKVRTFWMHMSNAK 157
+L G+ +Y A + + PH RGF + LR +D +F+ + VRT NA
Sbjct: 130 RLATGALIMYKAAKDYQIKNINPHSLRRGFAMNLRSQRADVVFISKASVRTQVFRGYNAV 189

Query: 156 IG 151
G
Sbjct: 190 FG 191