BP919092
Clone id YMU001_000121_B07
Library
Length 442
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000121_B07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GGTCTCCATGTTAGCCCTGGAGCTTGGTGGAGAATCCTCTTTCTAAGAGCATACAGCCAG
GCAGGCCTTCCGTTTCTGGAGCTTCACGGGCGTTGCCCCGTTCCCTAACCGGATGCTTAG
ACGTGAGCTACACTTCGTAGAAGATGCCGCAAGCGTAAATGGTTCGTCCTAGACCTAGAA
TGAAAGAGCCATCAATAACTTACTTTTCTTGGGCGTCTAGGGACGCTCAATGACAATCCC
CAAGTTGTCACTGCCTTACTTTTTCCGCTATTACGATAATGAGTCCCTCGGTGCAGTCAG
CACCGTCGATTGTCGGGCAACGAGGCTTACACTCATTCATTGTTCGTCCTATGTGTGCTC
TAGGCCTTTTGCTTTTGTGGCTTCGAGGGTAGCTACCTTTCTATTAAATCAAGGCCTGAG
AGTTGGCTGAACATCCCAGCTA
■■Homology search results ■■ -
sp_hit_id Q54IG2
Definition sp|Q54IG2|Y8886_DICDI Heat shock protein DDB_G0288861 OS=Dictyostelium discoideum
Align length 79
Score (bit) 31.2
E-value 2.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919092|Adiantum capillus-veneris mRNA, clone:
YMU001_000121_B07.
(442 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q54IG2|Y8886_DICDI Heat shock protein DDB_G0288861 OS=Dictyos... 31 2.0
sp|B2LT65|TLR2_SHEEP Toll-like receptor 2 OS=Ovis aries GN=TLR2 ... 30 3.4
sp|B2LT62|TLR2_CAPIB Toll-like receptor 2 OS=Capra ibex GN=TLR2 ... 30 3.4

>sp|Q54IG2|Y8886_DICDI Heat shock protein DDB_G0288861
OS=Dictyostelium discoideum GN=DDB_G0288861 PE=3 SV=1
Length = 722

Score = 31.2 bits (69), Expect = 2.0
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Frame = +3

Query: 21 SLVENPLSKSIQPGRPSVS------GASRALPRSLTGCLDVSYTS*KMPQA*MVRPRPRM 182
S V+ P S+S++P RP+VS G S+++ + L S + Q +PR +
Sbjct: 292 SNVDLPSSRSVEPQRPNVSDSDTNQGYSQSVEQRLGNTQQQSSQLPQQQQQQQDQPRSNV 351

Query: 183 KEPSITYFSWASRDAQ*QS 239
EPS + W+S+ Q +S
Sbjct: 352 NEPS--FQQWSSQQDQHRS 368


>sp|B2LT65|TLR2_SHEEP Toll-like receptor 2 OS=Ovis aries GN=TLR2
PE=2 SV=1
Length = 784

Score = 30.4 bits (67), Expect = 3.4
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Frame = +2

Query: 191 INNLLFLGV*GRSMTIPKLSLPYFFRYYDNESL----GAVSTVDCRATRLTLIHC 343
+N + +LG ++TI KL +P FF +YD S+ G V V +++ L+ C
Sbjct: 300 LNRIRYLGN-VETLTIRKLHIPQFFLFYDLSSIYPLTGKVKRVTIENSKVFLVPC 353


>sp|B2LT62|TLR2_CAPIB Toll-like receptor 2 OS=Capra ibex GN=TLR2
PE=3 SV=1
Length = 784

Score = 30.4 bits (67), Expect = 3.4
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Frame = +2

Query: 191 INNLLFLGV*GRSMTIPKLSLPYFFRYYDNESL----GAVSTVDCRATRLTLIHC 343
+N + +LG ++TI KL +P FF +YD S+ G V V +++ L+ C
Sbjct: 300 LNRIRYLGN-VETLTIRKLHIPQFFLFYDLSSIYPLTGKVKRVTIENSKVFLVPC 353


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919092|Adiantum capillus-veneris mRNA, clone:
YMU001_000121_B07.
(442 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******