BP919094
Clone id YMU001_000121_B09
Library
Length 411
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000121_B09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTTTTTTTTTTTTTTACCTGGACCATGATGGATCGAGATTTTGGTACCTTTCTGGATTA
CCTTTAGACTTTTCCGATTAGTGTCCCTGGATCTAATGTAGCTTCCCCTAAAGTTTCTTT
ACAATCCAAGTTCATTTGGTGGACGAGATGGTGTGATGACCTAGAGCAATGAGATAGGAC
ATATACTAGTTTTCAGATATCAGAGAGTGAGGGTTTGCTTGTTTATAGTTTTTTTGACCT
GGACCATGATGGATCGAGATTTTGGTACCTTTCTGGATTACCTTTAGACTTTTCAGATTA
GTGTCCCTGGATCTAATATAGCTTCCCCTAAAGTTTCTTTACAATCCAAGTTCATTTGGT
GACGAGATGGTGTGATGACCTAGAGCAACGAGATAGGACATATACTAGGTA
■■Homology search results ■■ -
sp_hit_id Q09804
Definition sp|Q09804|URB2_SCHPO Probable nucleolar pre-ribosomal-associated protein 2 OS=Schizosaccharomyces pombe
Align length 33
Score (bit) 30.0
E-value 3.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919094|Adiantum capillus-veneris mRNA, clone:
YMU001_000121_B09.
(395 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q09804|URB2_SCHPO Probable nucleolar pre-ribosomal-associated... 30 3.7

>sp|Q09804|URB2_SCHPO Probable nucleolar pre-ribosomal-associated
protein 2 OS=Schizosaccharomyces pombe GN=urb2 PE=2 SV=2
Length = 1318

Score = 30.0 bits (66), Expect = 3.7
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1

Query: 158 SHCSRSSHHLVHQMNLDCKETLGEATLDPGTLI 60
S C + + HLVH + L C TL P TLI
Sbjct: 1059 SDCFQRNRHLVHMVLLCCTHVFYNQTLKPATLI 1091


tr_hit_id A2E7A3
Definition tr|A2E7A3|A2E7A3_TRIVA Ankyrin repeat protein, putative OS=Trichomonas vaginalis G3
Align length 84
Score (bit) 33.9
E-value 4.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919094|Adiantum capillus-veneris mRNA, clone:
YMU001_000121_B09.
(395 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A2E7A3|A2E7A3_TRIVA Ankyrin repeat protein, putative OS=Trich... 34 4.1

>tr|A2E7A3|A2E7A3_TRIVA Ankyrin repeat protein, putative
OS=Trichomonas vaginalis G3 GN=TVAG_248670 PE=4 SV=1
Length = 932

Score = 33.9 bits (76), Expect = 4.1
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Frame = -2

Query: 385 MSYLVALGHHTISSPNELGL*RNFRGSYIRSRDTNLKSLKVIQKGTKISIHHGPGQKNYK 206
+ YL+++G ++PNE G+ F +I ++ L+ ++ + IS+ P +KN K
Sbjct: 578 IQYLISVG----ANPNEKGI-GGFSPLFIAAQKGYLELVQYL-----ISVGANPNEKNIK 627

Query: 205 QANPHSLISEN*YM---SYLIALG 143
A+P + S+N Y+ YLI++G
Sbjct: 628 GASPLFISSQNGYLELVQYLISVG 651