BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919096|Adiantum capillus-veneris mRNA, clone:
YMU001_000121_B11.
         (575 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q11094|TWIST_CAEEL Twist-related protein OS=Caenorhabditis el...    32   2.3  
sp|Q53902|MMPLA_STRCO Putative membrane protein actII-3 OS=Strep...    31   3.9  
sp|Q3ARM4|PTH_CHLCH Peptidyl-tRNA hydrolase OS=Chlorobium chloro...    25   5.2  
sp|Q4ZHG4|FNDC1_HUMAN Fibronectin type III domain-containing pro...    30   6.6  

>sp|Q11094|TWIST_CAEEL Twist-related protein OS=Caenorhabditis
           elegans GN=hlh-8 PE=1 SV=2
          Length = 178

 Score = 32.0 bits (71), Expect = 2.3
 Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 6/72 (8%)
 Frame = -2

Query: 346 STYYQERAYVCASTIDVERWMWFPSHGAIPKANPTHKPP------PRDGDSINPSHYTLP 185
           S + ++R Y   S  +    MW  ++G  P A P+  PP      P    S  P H  +P
Sbjct: 85  SIFDEKRGYNLQSAFN----MWRGNNGYTPIAGPSQLPPLQSAHIPPPAPSSIPPHCLMP 140

Query: 184 NAWLLMNCLPPR 149
             W    C PP+
Sbjct: 141 QPW-YQTCPPPK 151


>sp|Q53902|MMPLA_STRCO Putative membrane protein actII-3
           OS=Streptomyces coelicolor GN=actII-3 PE=3 SV=1
          Length = 711

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -2

Query: 355 MIVSTYYQERAYVCASTIDVERWMWFPSHGAIPKANPTHKP 233
           +++ T       V A T+DV RWMW+P H    + +P+  P
Sbjct: 653 VLLDTMIVRSVLVTALTLDVGRWMWWP-HPLARREDPSEDP 692


>sp|Q3ARM4|PTH_CHLCH Peptidyl-tRNA hydrolase OS=Chlorobium
           chlorochromatii (strain CaD3) GN=pth PE=3 SV=2
          Length = 190

 Score = 24.6 bits (52), Expect(2) = 5.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 78  YPNHTGITIIQAANTYKLA 134
           Y NH+G  ++ A N YK+A
Sbjct: 64  YMNHSGHAVVAAMNFYKVA 82



 Score = 23.9 bits (50), Expect(2) = 5.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 151 GGGGNS*GAKHLVECSGKD 207
           G  G   G KH++EC G +
Sbjct: 106 GSAGGQNGLKHIIECFGSN 124


>sp|Q4ZHG4|FNDC1_HUMAN Fibronectin type III domain-containing protein
            1 OS=Homo sapiens GN=FNDC1 PE=1 SV=3
          Length = 1888

 Score = 30.4 bits (67), Expect = 6.6
 Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
 Frame = -1

Query: 212  YQSFPLHSTKCLAPHELPPPPIVTSQCQFIGVGCLDYG-NPSVVRVSL--IGRQR 57
            + S P   T   AP + PPPP+ TSQ    G    D G +PS  R+SL   GR R
Sbjct: 989  HPSVPRRMTPGRAPQQQPPPPVATSQ-HHPGPQSRDAGRSPSQPRLSLTQAGRPR 1042

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919096|Adiantum capillus-veneris mRNA, clone:
YMU001_000121_B11.
         (575 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******