BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919100|Adiantum capillus-veneris mRNA, clone:
YMU001_000121_C03.
         (561 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9KVY5|MNME_VIBCH tRNA modification GTPase mnmE OS=Vibrio cho...    30   6.2  
sp|A5F485|MNME_VIBC3 tRNA modification GTPase mnmE OS=Vibrio cho...    30   6.2  
sp|Q9NR16|C163B_HUMAN Scavenger receptor cysteine-rich type 1 pr...    30   6.3  

>sp|Q9KVY5|MNME_VIBCH tRNA modification GTPase mnmE OS=Vibrio
           cholerae GN=mnmE PE=3 SV=2
          Length = 453

 Score = 30.4 bits (67), Expect = 6.2
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 428 TSLQNKQDQSGSPRVTCHVKHPAL 499
           T ++NK DQ+G P   CHV  P L
Sbjct: 330 TVIRNKADQTGEPLGICHVNQPTL 353


>sp|A5F485|MNME_VIBC3 tRNA modification GTPase mnmE OS=Vibrio
           cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 /
           O395) GN=mnmE PE=3 SV=2
          Length = 453

 Score = 30.4 bits (67), Expect = 6.2
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 428 TSLQNKQDQSGSPRVTCHVKHPAL 499
           T ++NK DQ+G P   CHV  P L
Sbjct: 330 TVIRNKADQTGEPLGICHVNQPTL 353


>sp|Q9NR16|C163B_HUMAN Scavenger receptor cysteine-rich type 1
           protein M160 OS=Homo sapiens GN=CD163L1 PE=1 SV=1
          Length = 1453

 Score = 30.4 bits (67), Expect = 6.3
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +1

Query: 364 ATVCTKYIA*SVGKPEHIIGMN*SAK*AGPIWIPKSDMSC 483
           A VC +      GKP H+ GM    + +GPIW+   D+SC
Sbjct: 511 AVVCKQL---GCGKPMHVFGMTYFKEASGPIWL--DDVSC 545

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919100|Adiantum capillus-veneris mRNA, clone:
YMU001_000121_C03.
         (561 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7PAF1|A7PAF1_VITVI Chromosome chr14 scaffold_9, whole genome...    36   1.3  
tr|Q29AN5|Q29AN5_DROPS GA19308 OS=Drosophila pseudoobscura pseud...    34   4.7  
tr|B4G657|B4G657_DROPE GL23715 OS=Drosophila persimilis GN=GL237...    34   4.7  
tr|Q24WU1|Q24WU1_DESHY Putative uncharacterized protein OS=Desul...    34   6.2  
tr|B8FXG3|B8FXG3_DESHD Putative uncharacterized protein OS=Desul...    34   6.2  

>tr|A7PAF1|A7PAF1_VITVI Chromosome chr14 scaffold_9, whole genome
            shotgun sequence OS=Vitis vinifera GN=GSVIVT00038089001
            PE=4 SV=1
          Length = 5125

 Score = 36.2 bits (82), Expect = 1.3
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = -1

Query: 471  TLGDPDWSCLFCRLVHADDVFWLSYR-LSNIFCAHCRIY 358
            +L   DW CLFC  + +  +F L +  LSN  C  CR Y
Sbjct: 2510 SLSSLDWQCLFCIFIFSHSIFSLHFTLLSNAACIGCRYY 2548


>tr|Q29AN5|Q29AN5_DROPS GA19308 OS=Drosophila pseudoobscura
            pseudoobscura GN=GA19308 PE=4 SV=2
          Length = 1218

 Score = 34.3 bits (77), Expect = 4.7
 Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
 Frame = +3

Query: 108  LVKYF-RQAESASVPTDTRFNGPGHICHSFCLSSVRCPCMSLPQSQFSGSSKHLNQSVIL 284
            +V+YF R+ + +S P+    NG G +  +   S++    +S    ++S   +HLN   + 
Sbjct: 1119 IVEYFERKRQDSSPPSMHHRNGNGTVAAAVAASALGSNYLSYESRRYSDFKRHLNPDALC 1178

Query: 285  WKLFKWPLHK 314
            + L K P H+
Sbjct: 1179 FDLEKKPAHQ 1188


>tr|B4G657|B4G657_DROPE GL23715 OS=Drosophila persimilis GN=GL23715
           PE=4 SV=1
          Length = 317

 Score = 34.3 bits (77), Expect = 4.7
 Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
 Frame = +3

Query: 108 LVKYF-RQAESASVPTDTRFNGPGHICHSFCLSSVRCPCMSLPQSQFSGSSKHLNQSVIL 284
           +V+YF R+ + +S P+    NG G +  +   S++    +S    ++S   +HLN   + 
Sbjct: 218 IVEYFERKRQDSSPPSMHHRNGNGTVAAAVAASALGSNYLSYESRRYSDFKRHLNPDALC 277

Query: 285 WKLFKWPLHK 314
           + L K P H+
Sbjct: 278 FDLEKKPAHQ 287


>tr|Q24WU1|Q24WU1_DESHY Putative uncharacterized protein
           OS=Desulfitobacterium hafniense (strain Y51) GN=DSY1712
           PE=4 SV=1
          Length = 212

 Score = 33.9 bits (76), Expect = 6.2
 Identities = 16/30 (53%), Positives = 19/30 (63%)
 Frame = +3

Query: 111 VKYFRQAESASVPTDTRFNGPGHICHSFCL 200
           VKYF  A+  S+P DTR +G   I  SFCL
Sbjct: 89  VKYFAAAQQWSIPLDTRIDGWAWIVLSFCL 118


>tr|B8FXG3|B8FXG3_DESHD Putative uncharacterized protein
           OS=Desulfitobacterium hafniense (strain DCB-2)
           GN=Dhaf_2859 PE=3 SV=1
          Length = 212

 Score = 33.9 bits (76), Expect = 6.2
 Identities = 16/30 (53%), Positives = 19/30 (63%)
 Frame = +3

Query: 111 VKYFRQAESASVPTDTRFNGPGHICHSFCL 200
           VKYF  A+  S+P DTR +G   I  SFCL
Sbjct: 89  VKYFAAAQQWSIPLDTRIDGWAWIVLSFCL 118