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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919117
Clone id YMU001_000121_D09
Library
Length 484
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000121_D09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTTTTTTTTTTTTTTTTTTCAATACGAACACCCTTGGATTATGGATAGCCACAAAGCAGG
TCTTATACAAGAAGTTAGGACATCCTGCATAAAACAGCCATTGCCTTTCTAGAACGCATG
CCGCTTCTTCACTTTCTTTTTCTTGAGCCTGACTACCTTTCTCTTAGGAGGCAAGTACAC
AGCCGGCTGAACCTTATATGTTCCAGCACGTGCCCGCTTCTGGAGTCGTTTGAATTTCTT
TATATCCACACCTTCTAGATATCTCTCATCTTCATCTGAGTTGTCCGGGGCGTCTGGATC
ATCCTTCTTTCTCAGTCTGAGAAAAGAGGCTAGAAGCATGTCTACTTCTGTTGCCACTTC
CAATACATTGATGAACCGCCCATCTGGACCTTTCTTCAACCTGGCCAAACATGCCTTTGT
GCGCTCCGTTGTATGCCAAGGCTTCCCAGGCCTCCACTCATGTTCATCATCAGGCTCCTC
CTTC
■■Homology search results ■■ -
sp_hit_id Q9BXX2
Definition sp|Q9BXX2|AN30B_HUMAN Ankyrin repeat domain-containing protein 30B OS=Homo sapiens
Align length 50
Score (bit) 32.0
E-value 1.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919117|Adiantum capillus-veneris mRNA, clone:
YMU001_000121_D09.
         (465 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9BXX2|AN30B_HUMAN Ankyrin repeat domain-containing protein 3...    32   1.3  

>sp|Q9BXX2|AN30B_HUMAN Ankyrin repeat domain-containing protein 30B
           OS=Homo sapiens GN=ANKRD30B PE=2 SV=2
          Length = 1477

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 14/50 (28%), Positives = 27/50 (54%)
 Frame = -2

Query: 464 KEEPDDEHEWRPGKPWHTTERTKACLARLKKGPDGRFINVLEVATEVDML 315
           K E D+E+ W  G  + ++ +T+ C+      P+  +  V+E+  EV+ L
Sbjct: 482 KREEDEEYSWDSGSLFESSAKTQVCI------PESMYQKVMEINREVEEL 525
tr_hit_id Q9AWU7
Definition tr|Q9AWU7|Q9AWU7_ORYSJ P0044F08.15 protein OS=Oryza sativa subsp. japonica
Align length 106
Score (bit) 49.3
E-value 9.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919117|Adiantum capillus-veneris mRNA, clone:
YMU001_000121_D09.
         (465 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9AWU7|Q9AWU7_ORYSJ P0044F08.15 protein OS=Oryza sativa subsp...    49   9e-05
tr|Q5ZCC0|Q5ZCC0_ORYSJ cDNA clone:J033108C20, full insert sequen...    49   9e-05
tr|A2WK62|A2WK62_ORYSI Putative uncharacterized protein OS=Oryza...    49   9e-05
tr|B6T890|B6T890_MAIZE Putative uncharacterized protein OS=Zea m...    49   1e-04
tr|A7PR69|A7PR69_VITVI Chromosome chr14 scaffold_26, whole genom...    48   2e-04
tr|A7PR68|A7PR68_VITVI Chromosome chr14 scaffold_26, whole genom...    48   3e-04
tr|A9PBK4|A9PBK4_POPTR Putative uncharacterized protein OS=Popul...    47   6e-04
tr|Q9LF56|Q9LF56_ARATH Putative uncharacterized protein K3M16_30...    44   0.004
tr|Q949X1|Q949X1_ARATH Putative uncharacterized protein At5g1746...    44   0.004
tr|A7APA3|A7APA3_BABBO DEAD/DEAH box helicase domain containing ...    33   7.0  

>tr|Q9AWU7|Q9AWU7_ORYSJ P0044F08.15 protein OS=Oryza sativa subsp.
           japonica GN=P0044F08.15 PE=4 SV=1
          Length = 350

 Score = 49.3 bits (116), Expect = 9e-05
 Identities = 35/106 (33%), Positives = 51/106 (48%)
 Frame = -2

Query: 464 KEEPDDEHEWRPGKPWHTTERTKACLARLKKGPDGRFINVLEVATEVDMLLASFLRLRKK 285
           KE P    E  PGK         A L +LKKGPDGR+INV +V T++D+L+ +F  +   
Sbjct: 197 KEPP----ELSPGKQARKLAVENA-LKKLKKGPDGRYINVFDVVTDIDILIGAFENIVSG 251

Query: 284 XXXXXXXXXXXXERYLEGVDIKKFKRLQKRARAGTYKVQPAVYLPP 147
                           + ++I+ FK +Q R R   +K  P + L P
Sbjct: 252 PEYAELREGGP-----KKLNIQFFKDIQARMRDPNFKFSPELKLKP 292


>tr|Q5ZCC0|Q5ZCC0_ORYSJ cDNA clone:J033108C20, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0037C04.34 PE=2 SV=1
          Length = 315

 Score = 49.3 bits (116), Expect = 9e-05
 Identities = 35/106 (33%), Positives = 51/106 (48%)
 Frame = -2

Query: 464 KEEPDDEHEWRPGKPWHTTERTKACLARLKKGPDGRFINVLEVATEVDMLLASFLRLRKK 285
           KE P    E  PGK         A L +LKKGPDGR+INV +V T++D+L+ +F  +   
Sbjct: 197 KEPP----ELSPGKQARKLAVENA-LKKLKKGPDGRYINVFDVVTDIDILIGAFENIVSG 251

Query: 284 XXXXXXXXXXXXERYLEGVDIKKFKRLQKRARAGTYKVQPAVYLPP 147
                           + ++I+ FK +Q R R   +K  P + L P
Sbjct: 252 PEYAELREGGP-----KKLNIQFFKDIQARMRDPNFKFSPELKLKP 292


>tr|A2WK62|A2WK62_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_00211 PE=4 SV=1
          Length = 315

 Score = 49.3 bits (116), Expect = 9e-05
 Identities = 35/106 (33%), Positives = 51/106 (48%)
 Frame = -2

Query: 464 KEEPDDEHEWRPGKPWHTTERTKACLARLKKGPDGRFINVLEVATEVDMLLASFLRLRKK 285
           KE P    E  PGK         A L +LKKGPDGR+INV +V T++D+L+ +F  +   
Sbjct: 197 KEPP----ELSPGKQARKLAVENA-LKKLKKGPDGRYINVFDVVTDIDILIGAFENIVSG 251

Query: 284 XXXXXXXXXXXXERYLEGVDIKKFKRLQKRARAGTYKVQPAVYLPP 147
                           + ++I+ FK +Q R R   +K  P + L P
Sbjct: 252 PEYAELREGGP-----KKLNIQFFKDIQARMRDPNFKFSPELKLKP 292


>tr|B6T890|B6T890_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 310

 Score = 48.9 bits (115), Expect = 1e-04
 Identities = 32/98 (32%), Positives = 48/98 (48%)
 Frame = -2

Query: 440 EWRPGKPWHTTERTKACLARLKKGPDGRFINVLEVATEVDMLLASFLRLRKKXXXXXXXX 261
           E  PGK         A L +LKKGPDGR+INV +V T++D+L+ +F  +           
Sbjct: 196 ELSPGKQARKLAVENA-LKKLKKGPDGRYINVFDVVTDIDILIGAFENIVSGPEYAELRE 254

Query: 260 XXXXERYLEGVDIKKFKRLQKRARAGTYKVQPAVYLPP 147
                   + ++I+ FK +Q R R   +K  P + L P
Sbjct: 255 GGP-----KKLNIQFFKDIQARMRDPNFKFSPELKLKP 287


>tr|A7PR69|A7PR69_VITVI Chromosome chr14 scaffold_26, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00022352001
           PE=4 SV=1
          Length = 312

 Score = 48.1 bits (113), Expect = 2e-04
 Identities = 32/102 (31%), Positives = 49/102 (48%)
 Frame = -2

Query: 452 DDEHEWRPGKPWHTTERTKACLARLKKGPDGRFINVLEVATEVDMLLASFLRLRKKXXXX 273
           ++  E  PGK         A L +LKKGPDGR+ NV EV +++D+L+ +F  +       
Sbjct: 194 NEPEEMSPGKQARKIAVENA-LKKLKKGPDGRYTNVWEVMSDLDILIGAFENIASGPEYA 252

Query: 272 XXXXXXXXERYLEGVDIKKFKRLQKRARAGTYKVQPAVYLPP 147
                       + ++I+ FK +Q R R   YK  P + L P
Sbjct: 253 ELRQGGP-----KKLNIQFFKDIQARMRDPNYKFSPELKLKP 289


>tr|A7PR68|A7PR68_VITVI Chromosome chr14 scaffold_26, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00022351001
           PE=4 SV=1
          Length = 285

 Score = 47.8 bits (112), Expect = 3e-04
 Identities = 32/102 (31%), Positives = 49/102 (48%)
 Frame = -2

Query: 452 DDEHEWRPGKPWHTTERTKACLARLKKGPDGRFINVLEVATEVDMLLASFLRLRKKXXXX 273
           ++  E  PGK         A L +LKKGPDGR+ NV EV +++D+L+ +F  +       
Sbjct: 167 NEPEEMSPGKQARKIAVENA-LKQLKKGPDGRYTNVWEVMSDLDILIGAFENIASGPEYA 225

Query: 272 XXXXXXXXERYLEGVDIKKFKRLQKRARAGTYKVQPAVYLPP 147
                       + ++I+ FK +Q R R   YK  P + L P
Sbjct: 226 ELRQGGP-----KKLNIQFFKDIQARMRDPNYKFSPELKLKP 262


>tr|A9PBK4|A9PBK4_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 324

 Score = 46.6 bits (109), Expect = 6e-04
 Identities = 31/102 (30%), Positives = 50/102 (49%)
 Frame = -2

Query: 452 DDEHEWRPGKPWHTTERTKACLARLKKGPDGRFINVLEVATEVDMLLASFLRLRKKXXXX 273
           ++E E  PGK         A L +LKKGPDGR+ NV EV +++D+L+ +F  +       
Sbjct: 206 ENEPELSPGKQARKLAVENA-LKKLKKGPDGRYTNVWEVMSDIDILIGAFENIVSGPEYE 264

Query: 272 XXXXXXXXERYLEGVDIKKFKRLQKRARAGTYKVQPAVYLPP 147
                       + ++++ FK +Q R R   +K  P + L P
Sbjct: 265 ELRQGGP-----KKLNMQFFKDIQARMRDPNFKFSPELKLKP 301


>tr|Q9LF56|Q9LF56_ARATH Putative uncharacterized protein K3M16_30
           OS=Arabidopsis thaliana GN=K3M16_30 PE=4 SV=1
          Length = 399

 Score = 43.9 bits (102), Expect = 0.004
 Identities = 30/102 (29%), Positives = 48/102 (47%)
 Frame = -2

Query: 452 DDEHEWRPGKPWHTTERTKACLARLKKGPDGRFINVLEVATEVDMLLASFLRLRKKXXXX 273
           ++  E  PGK         A L +L KGPDGR+ NV EV ++VD+L+ +F  +       
Sbjct: 281 NEPEELSPGKKARKLAVENA-LKKLNKGPDGRYTNVWEVMSDVDILIGAFENIISGPEYE 339

Query: 272 XXXXXXXXERYLEGVDIKKFKRLQKRARAGTYKVQPAVYLPP 147
                       + ++++ FK +Q R R   +K  P + L P
Sbjct: 340 ELRKGGP-----KRLNMQFFKDIQTRMRDPNFKFTPEIKLKP 376


>tr|Q949X1|Q949X1_ARATH Putative uncharacterized protein At5g17460
           OS=Arabidopsis thaliana GN=At5g17460 PE=2 SV=1
          Length = 309

 Score = 43.9 bits (102), Expect = 0.004
 Identities = 30/102 (29%), Positives = 48/102 (47%)
 Frame = -2

Query: 452 DDEHEWRPGKPWHTTERTKACLARLKKGPDGRFINVLEVATEVDMLLASFLRLRKKXXXX 273
           ++  E  PGK         A L +L KGPDGR+ NV EV ++VD+L+ +F  +       
Sbjct: 191 NEPEELSPGKKARKLAVENA-LKKLNKGPDGRYTNVWEVMSDVDILIGAFENIISGPEYE 249

Query: 272 XXXXXXXXERYLEGVDIKKFKRLQKRARAGTYKVQPAVYLPP 147
                       + ++++ FK +Q R R   +K  P + L P
Sbjct: 250 ELRKGGP-----KRLNMQFFKDIQTRMRDPNFKFTPEIKLKP 286


>tr|A7APA3|A7APA3_BABBO DEAD/DEAH box helicase domain containing
           protein OS=Babesia bovis GN=BBOV_III008270 PE=4 SV=1
          Length = 953

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 17/68 (25%), Positives = 33/68 (48%)
 Frame = +3

Query: 129 PDYLSLRRQVHSRLNLICSSTCPLLESFEFLYIHTF*ISLIFI*VVRGVWIILLSQSEKR 308
           PDY  LR  +  + +L+  S  P+L++ +F Y+  F    I   +   + +++    + R
Sbjct: 411 PDYKGLRTAIEQKESLVEQSDTPVLKNVQFFYVEVFEAPNIVKQIALKLRVVVKLLEDPR 470

Query: 309 G*KHVYFC 332
             K + FC
Sbjct: 471 YIKTIIFC 478