BP919118
Clone id YMU001_000121_D10
Library
Length 577
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000121_D10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GCTTTTCATGCGAGTGGTCCGATGATGCGTATGCCCAATTGTTACTGTCCGATTGAATTA
ACTTCTCCTTTTAGTGCTAGGCTTCAATTGGCTTCTCTGTCCTCCATGTTCGTATGCGAG
ACAGTTACTCTTAGGCCTCAGTGGAAATGTTGATGTGTGGGGAAGGGTGTGTTGCTACCC
AGTTCTCTGTTGTCTATTGGCCGCTCATCGCAATAGTGTAAAAATTGGAAAACCTTTGAT
AGTTATTAGTGGAAGGTAACCACGAGTGTTATTGAATTTGGGCGTGTTCCTTGTTTTAAT
AGGAGTTCAAAAGCCTTTCAATTGAGTAACTTTCAGCTGTTTTGTAAGCATGGTCGTTAT
GAACCACATCAAGTTAATGTGTTCTTAAAATAACTTGCGTGAGTTTTTCAAACATGTTGG
CCTTTGCTATGAAGCAACATTTTTGCTTGTGTGTGTTGAATAGGTTGTTAGCTTAACACA
GATCCAACTTGAGGAAGCAGTGAGCCCTTTTGGTTGTGGCATATCATCTCAAAAGGCCGC
GAATTCTTCCAGGAGTACCTGCAGGTAATATCTCAAG
■■Homology search results ■■ -
sp_hit_id Q49WP1
Definition sp|Q49WP1|COXX_STAS1 Protoheme IX farnesyltransferase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
Align length 47
Score (bit) 30.0
E-value 8.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919118|Adiantum capillus-veneris mRNA, clone:
YMU001_000121_D10.
(577 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q49WP1|COXX_STAS1 Protoheme IX farnesyltransferase OS=Staphyl... 30 8.6
sp|P14297|ARYB_MANSE Arylphorin subunit beta OS=Manduca sexta PE... 30 8.7

>sp|Q49WP1|COXX_STAS1 Protoheme IX farnesyltransferase
OS=Staphylococcus saprophyticus subsp. saprophyticus
(strain ATCC 15305 / DSM 20229) GN=ctaB PE=3 SV=1
Length = 303

Score = 30.0 bits (66), Expect = 8.6
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +3

Query: 75 C*ASIGFSVLHVRMRDSYS*ASVEMLMCGEGCVATQFSVVYWPLIAI 215
C I F L ++ +D YS A++ ML +G T+ S+ +W ++ +
Sbjct: 188 CWQPIHFYALAIKRKDEYSLANIPMLPSVKGFNRTRVSMFFWLVVLL 234


>sp|P14297|ARYB_MANSE Arylphorin subunit beta OS=Manduca sexta PE=2
SV=2
Length = 703

Score = 30.0 bits (66), Expect = 8.7
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = -1

Query: 358 NDHAYKTAESYSIERLLNSY*NK----EHAQIQ*HSWLPSTNNYQRFSNFY 218
ND YK + Y+IE +++Y NK E Q+ +LP Y FS FY
Sbjct: 54 NDEYYKIGKEYNIEANIDNYSNKKAVEEFLQLYRTGFLP---KYYEFSPFY 101


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919118|Adiantum capillus-veneris mRNA, clone:
YMU001_000121_D10.
(577 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******