BP919120
Clone id YMU001_000121_D12
Library
Length 300
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000121_D12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GATCTGCAACCTCTTCAACACCTGCCTCTCGCCCAACAACACCCACTAGTAGACCCAAAG
CTCCTGCATCGGCACCAATGCATCGTCCTGAAACACCCACCAACAGATCGAGGGCCGCTC
CAACACCTGCATCACGCCCCTCGACGCCCTCAAATAGAGCCACGATCACTCCATTCTCTA
GAAACGCAGAAAATAATGCGATGTCTTCCTCATCAGCATCAAAAGGCAATGTCCCATCAC
GCTCTACTACGCCTCTGCGCAGACCAATAACTCCCCAAGCGCAGCCTCAATCAGTTTCTG
■■Homology search results ■■ -
sp_hit_id Q9CXK9
Definition sp|Q9CXK9|RBM33_MOUSE RNA-binding protein 33 OS=Mus musculus
Align length 95
Score (bit) 32.0
E-value 0.99
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919120|Adiantum capillus-veneris mRNA, clone:
YMU001_000121_D12.
(300 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9CXK9|RBM33_MOUSE RNA-binding protein 33 OS=Mus musculus GN=... 32 0.99
sp|Q1LYG4|CR3LB_DANRE cAMP-responsive element-binding protein 3-... 32 1.3
sp|Q502F0|CR3LA_DANRE cAMP-responsive element-binding protein 3-... 32 1.3
sp|Q0BPE6|DAPB_GRABC Dihydrodipicolinate reductase OS=Granulibac... 31 1.7
sp|Q5X3Q5|HIS82_LEGPA Histidinol-phosphate aminotransferase 2 OS... 30 2.9
sp|Q5WV43|HIS82_LEGPL Histidinol-phosphate aminotransferase 2 OS... 29 6.5
sp|Q5ZU10|HIS82_LEGPH Histidinol-phosphate aminotransferase 2 OS... 29 6.5
sp|Q9PWE8|TBX5_CHICK T-box transcription factor TBX5 OS=Gallus g... 29 8.4
sp|Q23985|DTX_DROME Protein deltex OS=Drosophila melanogaster GN... 29 8.4
sp|P60178|TXMG3_AGEAP Mu-agatoxin-3 OS=Agelenopsis aperta PE=1 SV=1 29 8.4
sp|P60177|TXC2_HOLCU Curtatoxin-2 OS=Hololena curta PE=1 SV=1 29 8.4

>sp|Q9CXK9|RBM33_MOUSE RNA-binding protein 33 OS=Mus musculus
GN=Rbm33 PE=2 SV=2
Length = 1231

Score = 32.0 bits (71), Expect = 0.99
Identities = 27/95 (28%), Positives = 37/95 (38%), Gaps = 13/95 (13%)
Frame = +1

Query: 49 VDPKLLHRHQCIVLKHPPTDRGPLQHLHH-------APRRPQIEPRSLHSLET------Q 189
+ P L HQ PP P QH HH P P +P+ ++T
Sbjct: 662 LQPPLQPPHQPPPQHQPPPQHQPQQHQHHHHLSAPPPPLMPMSQPQFRPHVQTAQPQPSS 721

Query: 190 KIMRCLPHQHQKAMSHHALLRLCADQ*LPKRSLNQ 294
M+C PHQ + H+A A Q + KR + Q
Sbjct: 722 SRMQCTPHQ---GLRHNA-----ASQNISKRPMQQ 748


>sp|Q1LYG4|CR3LB_DANRE cAMP-responsive element-binding protein
3-like protein 3-B OS=Danio rerio GN=creb3l3b PE=2 SV=2
Length = 428

Score = 31.6 bits (70), Expect = 1.3
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +1

Query: 97 PPTDRGPLQHLHHAPRRPQIEPRSLHSLETQKIMRCLPHQHQKAMSHHALLRLCADQ 267
P TD QH +P R ++ RSLH+L++ +++R L H + + L R D+
Sbjct: 308 PFTDTKVSQHGDFSPMR--VQSRSLHNLQSSRVLRNLDHPYSMTENAKILPRFPEDK 362


>sp|Q502F0|CR3LA_DANRE cAMP-responsive element-binding protein
3-like protein 3-A OS=Danio rerio GN=creb3l3a PE=2 SV=1
Length = 428

Score = 31.6 bits (70), Expect = 1.3
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +1

Query: 97 PPTDRGPLQHLHHAPRRPQIEPRSLHSLETQKIMRCLPHQHQKAMSHHALLRLCADQ 267
P TD QH +P R ++ RSLH+L++ +++R L H + + L R D+
Sbjct: 308 PFTDTKVSQHGDFSPMR--VQSRSLHNLQSSRVLRNLDHPYSMTENAKILPRFPEDK 362


>sp|Q0BPE6|DAPB_GRABC Dihydrodipicolinate reductase OS=Granulibacter
bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=dapB
PE=3 SV=1
Length = 261

Score = 31.2 bits (69), Expect = 1.7
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Frame = -3

Query: 280 AWGVIGLRRGVVERDGTLPFDADEEDIALF------SAFLENGVIVALFEGVEGRDAGVG 119
A G LR G V + TL F AD+E IAL AF V AL+ V+G+ G+
Sbjct: 195 AIGFAALRGGQVVGEHTLLFAADDEHIALTHRAFDRRAFARGAVQAALW--VQGKPPGLY 252

Query: 118 AALDLL 101
+ +D+L
Sbjct: 253 SMMDVL 258


>sp|Q5X3Q5|HIS82_LEGPA Histidinol-phosphate aminotransferase 2
OS=Legionella pneumophila (strain Paris) GN=hisC2 PE=3
SV=1
Length = 369

Score = 30.4 bits (67), Expect = 2.9
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = -3

Query: 229 LPFDADEEDIALFSAFLENGVIV 161
L FD +E+ IAL++ L+NG+IV
Sbjct: 313 LTFDCEEDSIALYNYLLDNGIIV 335


>sp|Q5WV43|HIS82_LEGPL Histidinol-phosphate aminotransferase 2
OS=Legionella pneumophila (strain Lens) GN=hisC2 PE=3
SV=1
Length = 369

Score = 29.3 bits (64), Expect = 6.5
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = -3

Query: 229 LPFDADEEDIALFSAFLENGVIV 161
L FD +E+ +AL++ L+NG+IV
Sbjct: 313 LTFDCEEDSMALYNYLLDNGIIV 335


>sp|Q5ZU10|HIS82_LEGPH Histidinol-phosphate aminotransferase 2
OS=Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 / ATCC 33152 / DSM 7513) GN=hisC2 PE=3
SV=2
Length = 369

Score = 29.3 bits (64), Expect = 6.5
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = -3

Query: 229 LPFDADEEDIALFSAFLENGVIV 161
L FD +E+ +AL++ L+NG+IV
Sbjct: 313 LTFDCEEDSMALYNYLLDNGIIV 335


>sp|Q9PWE8|TBX5_CHICK T-box transcription factor TBX5 OS=Gallus
gallus GN=TBX5 PE=2 SV=1
Length = 521

Score = 28.9 bits (63), Expect = 8.4
Identities = 20/75 (26%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Frame = +1

Query: 55 PKLLHRHQCIVLKHPPTDRGPLQHLH----HAPRRPQIEPRSLHSLETQKIMRCLPHQHQ 222
P + C V P DR P QH P P++ + H+ + QHQ
Sbjct: 402 PSVPSYSSCTVSAMQPMDRLPYQHFSAHFTSGPLMPRLSSVANHTSPQIGDTHSM-FQHQ 460

Query: 223 KAMSHHALLRLCADQ 267
++SH ++R C Q
Sbjct: 461 TSVSHQPIVRQCGPQ 475


>sp|Q23985|DTX_DROME Protein deltex OS=Drosophila melanogaster GN=dx
PE=1 SV=2
Length = 738

Score = 28.9 bits (63), Expect = 8.4
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = +1

Query: 52 DPKLLHRHQCIVLKHP-PTDRGPLQHLHHAPRRPQIEPRSLHSLETQKIMRCLPHQHQKA 228
D K LHR +HP PT Q H + Q + + H + Q+ + HQ Q
Sbjct: 239 DTKSLHRVPMTRQQHPLPTSHQVQQQQHQHQHQQQQQQQHHHQHQQQQHQQQQQHQMQHH 298

Query: 229 MSHH 240
HH
Sbjct: 299 QIHH 302


>sp|P60178|TXMG3_AGEAP Mu-agatoxin-3 OS=Agelenopsis aperta PE=1 SV=1
Length = 38

Score = 28.9 bits (63), Expect = 8.4
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = -2

Query: 140 GA*CRCWSGPRSVGGCF---RTMHWCRCRS 60
G C W+GP G + R+M +CRCRS
Sbjct: 7 GQRCADWAGPYCCSGYYCSCRSMPYCRCRS 36


tr_hit_id Q2J4V8
Definition tr|Q2J4V8|Q2J4V8_FRASC Phage integrase OS=Frankia sp. (strain CcI3)
Align length 55
Score (bit) 35.0
E-value 1.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919120|Adiantum capillus-veneris mRNA, clone:
YMU001_000121_D12.
(300 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q2J4V8|Q2J4V8_FRASC Phage integrase OS=Frankia sp. (strain Cc... 35 1.8
tr|B0DQR9|B0DQR9_LACBS Predicted protein OS=Laccaria bicolor (st... 35 1.8
tr|Q08QN7|Q08QN7_STIAU Putative uncharacterized protein OS=Stigm... 34 3.1
tr|Q9FT90|Q9FT90_ARATH Putative uncharacterized protein F8L15_18... 34 3.1
tr|Q8RWV9|Q8RWV9_ARATH Putative uncharacterized protein At5g0845... 34 3.1
tr|B0WYB8|B0WYB8_CULQU Putative uncharacterized protein OS=Culex... 34 4.1
tr|A1CHY3|A1CHY3_ASPCL Putative uncharacterized protein OS=Asper... 34 4.1
tr|B4N4K7|B4N4K7_DROWI GK12379 OS=Drosophila willistoni GN=GK123... 33 5.4
tr|B0X3W6|B0X3W6_CULQU Tyrosine-protein kinase receptor OS=Culex... 33 5.4
tr|B6NE31|B6NE31_BRAFL Putative uncharacterized protein OS=Branc... 33 7.0
tr|B4N5E4|B4N5E4_DROWI GK20557 OS=Drosophila willistoni GN=GK205... 33 7.0

>tr|Q2J4V8|Q2J4V8_FRASC Phage integrase OS=Frankia sp. (strain CcI3)
GN=Francci3_4338 PE=4 SV=1
Length = 207

Score = 35.0 bits (79), Expect = 1.8
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +1

Query: 55 PKLLHRHQCIVLKHPPTDRGPLQHLHHAPRRPQIEPRSLHSLETQKIMRCLPHQH 219
P+ H + L HPPT + + H A +RP++ P HS + + LPH H
Sbjct: 58 PRPRHPRRPESLPHPPTRQPARRRNHPAEQRPRVHPPRRHSHPPRTPHQPLPHPH 112


>tr|B0DQR9|B0DQR9_LACBS Predicted protein OS=Laccaria bicolor
(strain S238N-H82) GN=LACBIDRAFT_331850 PE=4 SV=1
Length = 383

Score = 35.0 bits (79), Expect = 1.8
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1

Query: 49 VDPKLLHRHQCIVLKHPPTDRGPLQ-HLHHAPRRPQIEPRSLHSL 180
+ P H H PPT GP+Q H+ H PRR ++ R H+L
Sbjct: 1 MSPIANHHHSPAQPSPPPTRTGPIQPHISHLPRRRRLHTRHYHAL 45


>tr|Q08QN7|Q08QN7_STIAU Putative uncharacterized protein
OS=Stigmatella aurantiaca DW4/3-1 GN=STIAU_7130 PE=4
SV=1
Length = 516

Score = 34.3 bits (77), Expect = 3.1
Identities = 37/117 (31%), Positives = 47/117 (40%), Gaps = 35/117 (29%)
Frame = +1

Query: 55 PKLLH-RHQCIVLKHPPTD-----RGPL------QHLHHAPRR------PQIEPRSLHSL 180
P+L H HQ IV H P RGP QHLHH PR P ++P LH L
Sbjct: 252 PRLPHWPHQDIVPLHIPVQSLHPVRGPQRLRQLRQHLHHLPRTWIPLPPPLVQPHPLHPL 311

Query: 181 ETQKIMRCL---------PHQ--HQKAMSHHALLRLCADQ*LPK------RSLNQFL 300
+R + PHQ H + LRL + +P+ R L +FL
Sbjct: 312 HHHVWVRQVPRPSFPHPPPHQLRHPRVADPRQQLRLSLEPLIPRVHRQLQRHLGRFL 368


>tr|Q9FT90|Q9FT90_ARATH Putative uncharacterized protein F8L15_180
OS=Arabidopsis thaliana GN=F8L15_180 PE=4 SV=1
Length = 917

Score = 34.3 bits (77), Expect = 3.1
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +1

Query: 94 HPPTDRGPLQHLHHAPRRPQIEPRSLHSLETQKIMRCLPHQHQKAMSHHAL 246
H P P Q +HH ++P P+S + Q ++ LPH H + SH L
Sbjct: 38 HQPVTPPPAQ-VHHNHQQPHQHPQSQSQSQPQPHLQALPHPHSHSHSHSPL 87


>tr|Q8RWV9|Q8RWV9_ARATH Putative uncharacterized protein At5g08450
OS=Arabidopsis thaliana GN=At5g08450 PE=2 SV=1
Length = 918

Score = 34.3 bits (77), Expect = 3.1
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +1

Query: 94 HPPTDRGPLQHLHHAPRRPQIEPRSLHSLETQKIMRCLPHQHQKAMSHHAL 246
H P P Q +HH ++P P+S + Q ++ LPH H + SH L
Sbjct: 38 HQPVTPPPAQ-VHHNHQQPHQHPQSQSQSQPQPHLQALPHPHSHSHSHSPL 87


>tr|B0WYB8|B0WYB8_CULQU Putative uncharacterized protein OS=Culex
quinquefasciatus GN=CpipJ_CPIJ012192 PE=4 SV=1
Length = 682

Score = 33.9 bits (76), Expect = 4.1
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1

Query: 76 QCIVLKHPPTDRGPLQHLHHAPRRPQIEPRSLHSLETQKIMRCLPHQHQKAMS 234
Q I+ + PP P QH HH P++PQ +PR H ++ +QHQ+ S
Sbjct: 480 QPIIHQAPP----PPQH-HHTPKQPQPQPRHQHQQQSSTPSSQASNQHQRHQS 527


>tr|A1CHY3|A1CHY3_ASPCL Putative uncharacterized protein
OS=Aspergillus clavatus GN=ACLA_049600 PE=4 SV=1
Length = 724

Score = 33.9 bits (76), Expect = 4.1
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +1

Query: 82 IVLKHPPTDRGPLQHLHHAPRRPQIEPRSLHSLETQKIMRCLPHQHQKAMSHHALL 249
+ K PP+ R P Q L P P I P +L+TQ R + + S L+
Sbjct: 519 VASKRPPSARAPTQRLPQKPSPPSISPPPAKALDTQSRSRASSQNNSSSSSSSPLI 574


>tr|B4N4K7|B4N4K7_DROWI GK12379 OS=Drosophila willistoni GN=GK12379
PE=4 SV=1
Length = 720

Score = 33.5 bits (75), Expect = 5.4
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +1

Query: 94 HPPTDRGPLQHLHHAPRRPQIEPRSL--HSLETQKIMRCLPHQHQKAMSHHALLRLCADQ 267
HPP + PL H P + R + H L+ +++ H HQK+ HH L +
Sbjct: 445 HPPKENLPLLPKSHQPHLQKNHLRGVNPHDLQKNHLLKGSLHLHQKSHHHHLLKNQLLKE 504

Query: 268 *LP 276
LP
Sbjct: 505 NLP 507


>tr|B0X3W6|B0X3W6_CULQU Tyrosine-protein kinase receptor OS=Culex
quinquefasciatus GN=CpipJ_CPIJ013924 PE=3 SV=1
Length = 1081

Score = 33.5 bits (75), Expect = 5.4
Identities = 20/64 (31%), Positives = 26/64 (40%)
Frame = +1

Query: 49 VDPKLLHRHQCIVLKHPPTDRGPLQHLHHAPRRPQIEPRSLHSLETQKIMRCLPHQHQKA 228
+ P H + P R P H H PR+ HSLE +KI+R HQ Q+
Sbjct: 810 ITPSSSSSHHSLNRNGVPEPREPGPHQPHQPRKHH------HSLEREKILRTNHHQQQQQ 863

Query: 229 MSHH 240
H
Sbjct: 864 QQPH 867


>tr|B6NE31|B6NE31_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_94044 PE=4 SV=1
Length = 557

Score = 33.1 bits (74), Expect = 7.0
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +1

Query: 55 PKLLHR-HQCIVLKHPPTDRGPLQH--LHHAPR--RPQIEPRSLHSLETQKIMRCLPHQH 219
P+L HR Q L+HP P QH L H P+ RPQ P+ H + +R P QH
Sbjct: 81 PQLRHRPQQHPQLQHPQLRHRPQQHPQLRHRPQQHRPQQHPQLRHRPQQHPQLRHRPQQH 140