BP919123
Clone id YMU001_000121_E03
Library
Length 511
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000121_E03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AGGTTATAGCGTTACAAATAGATAGCCCACTCGGCACCTCTTGAGTTTTCGCCAACAATG
CACTGTTAATCACCGAGCTCTGCAAAAGCTCTTTTTCCTCAATCTCTGTATGAGCTACCT
GTTCCTTTGAAGTTGCACATGCCTTCAAGATGGAAGCAGACGTGTGAGCATTGGGAGAAA
CTTTCTCAACTTGCATCAAATCAAAACACGCCAGCTTGACCTTCACTTCCTACTCCTCAT
GGTCCAGAGTGGTTGGTTGCCCAACCCCTTGTATTGCAGCATTTATTTCACAAGTGTTAG
ACATAACATCCATACCATCATGAATACCGGCATTCTCTTTACCTAGCAAAGACAAGTCAC
TATCCTTGCAAACCACACACTCATCACAAGTCTAATACATACTGTTATGTCTATCTTGCT
CTACATGCCGGATTGCCAGCTTATGAGGCTCACCATGCTTCTCATGCCAAATTGGCATCA
AGCCCCTAATCGCATTGCAATGCTTAAGATC
■■Homology search results ■■ -
sp_hit_id Q9C9H9
Definition sp|Q9C9H9|PP114_ARATH Pentatricopeptide repeat-containing protein At1g71420 OS=Arabidopsis thaliana
Align length 55
Score (bit) 34.3
E-value 0.35
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919123|Adiantum capillus-veneris mRNA, clone:
YMU001_000121_E03.
(511 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9C9H9|PP114_ARATH Pentatricopeptide repeat-containing protei... 34 0.35
sp|Q9ZUT5|PP191_ARATH Pentatricopeptide repeat-containing protei... 32 1.3
sp|Q8MP30|Y7791_DICDI Uncharacterized histidine-rich protein DDB... 32 1.7
sp|Q8K1L0|CREB5_MOUSE cAMP-responsive element-binding protein 5 ... 32 2.2
sp|Q02930|CREB5_HUMAN cAMP-responsive element-binding protein 5 ... 32 2.2
sp|Q9LSL8|PP446_ARATH Pentatricopeptide repeat-containing protei... 31 2.9
sp|Q1PFQ9|PPR62_ARATH Pentatricopeptide repeat-containing protei... 30 5.0
sp|Q8VYH0|PP313_ARATH Pentatricopeptide repeat-containing protei... 30 5.0
sp|P31973|FENR_SYNP2 Ferredoxin--NADP reductase OS=Synechococcus... 30 5.0
sp|Q5E9Y5|DOM3Z_BOVIN Protein Dom3Z OS=Bos taurus GN=DOM3Z PE=2 ... 30 5.0
sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protei... 30 6.5
sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protei... 30 6.5
sp|Q4G386|MIND_EMIHU Putative septum site-determining protein mi... 30 6.5
sp|O77932|DOM3Z_HUMAN Protein Dom3Z OS=Homo sapiens GN=DOM3Z PE=... 30 6.5
sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protei... 30 8.5
sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protei... 30 8.5

>sp|Q9C9H9|PP114_ARATH Pentatricopeptide repeat-containing protein
At1g71420 OS=Arabidopsis thaliana GN=PCMP-H70 PE=2 SV=1
Length = 745

Score = 34.3 bits (77), Expect = 0.35
Identities = 18/55 (32%), Positives = 37/55 (67%), Gaps = 4/55 (7%)
Frame = -1

Query: 205 FDLMQVEKVSPNAHTSASILKACA---TSKEQVA-HTEIEEKELLQSSVINSALL 53
F ++ EK+SP+ +T +S+LKACA T++ ++ H ++ + L +V+N++L+
Sbjct: 357 FGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLI 411


>sp|Q9ZUT5|PP191_ARATH Pentatricopeptide repeat-containing protein
At2g37310 OS=Arabidopsis thaliana GN=PCMP-E49 PE=2 SV=1
Length = 657

Score = 32.3 bits (72), Expect = 1.3
Identities = 23/93 (24%), Positives = 37/93 (39%)
Frame = -1

Query: 283 NAAIQGVGQPTTLDHEE*EVKVKLACFDLMQVEKVSPNAHTSASILKACATSKEQVAHTE 104
N+ I G Q + + + K LAC D PN T S+ +AC S + + E
Sbjct: 202 NSMISGYSQSGSFEDCKKMYKAMLACSDF------KPNGVTVISVFQACGQSSDLIFGLE 255

Query: 103 IEEKELLQSSVINSALLAKTQEVPSGLSICNAI 5
+ +K + + LS+CNA+
Sbjct: 256 VHKKMI-------------ENHIQMDLSLCNAV 275


>sp|Q8MP30|Y7791_DICDI Uncharacterized histidine-rich protein
DDB0167791 OS=Dictyostelium discoideum GN=DDB_G0274557
PE=4 SV=1
Length = 233

Score = 32.0 bits (71), Expect = 1.7
Identities = 19/60 (31%), Positives = 24/60 (40%)
Frame = +1

Query: 205 NTPA*PSLPTPHGPEWLVAQPLVLQHLFHKC*T*HPYHHEYRHSLYLAKTSHYPCKPHTH 384
N P P+ PH P P HL H H +HH + H + H+P PH H
Sbjct: 45 NNPHNPN-NNPHNPHNPNNNPHHPHHLHHHHHHHHHHHHHHHHHHHHHHHHHHPHHPHHH 103



Score = 30.4 bits (67), Expect = 5.0
Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = +1

Query: 235 PHGPEWLVAQPLVLQHLFHKC*T*HPYHHEYRHSLYLAKTSHYP-CKPHTHH 387
PH P P L H H H +HH + H + H+P PH HH
Sbjct: 57 PHNPNNNPHHPHHLHHHHHHHHHHHHHHHHHHHHHHHHHHPHHPHHHPHHHH 108


>sp|Q8K1L0|CREB5_MOUSE cAMP-responsive element-binding protein 5
OS=Mus musculus GN=Creb5 PE=2 SV=3
Length = 357

Score = 31.6 bits (70), Expect = 2.2
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +1

Query: 307 HPYHHEYRHSLYLAKTSHYPCKPHTHHKSNTYCYVYLALHAGLP 438
HPY H+++H + + + H HH S+++ + + A H P
Sbjct: 137 HPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPAHHQTSP 180


>sp|Q02930|CREB5_HUMAN cAMP-responsive element-binding protein 5
OS=Homo sapiens GN=CREB5 PE=1 SV=2
Length = 508

Score = 31.6 bits (70), Expect = 2.2
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +1

Query: 307 HPYHHEYRHSLYLAKTSHYPCKPHTHHKSNTYCYVYLALHAGLP 438
HPY H+++H + + + H HH S+++ + + A H P
Sbjct: 288 HPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPAHHQTSP 331


>sp|Q9LSL8|PP446_ARATH Pentatricopeptide repeat-containing protein
At5g65570 OS=Arabidopsis thaliana GN=PCMP-H47 PE=2 SV=1
Length = 738

Score = 31.2 bits (69), Expect = 2.9
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -1

Query: 205 FDLMQVEKVSPNAHTSASILKACATSKE 122
F M VEKV PN +T AS+L +C K+
Sbjct: 255 FQSMLVEKVQPNEYTYASVLISCGNLKD 282


>sp|Q1PFQ9|PPR62_ARATH Pentatricopeptide repeat-containing protein
At1g28690, mitochondrial OS=Arabidopsis thaliana
GN=PCMP-E34 PE=2 SV=2
Length = 520

Score = 30.4 bits (67), Expect = 5.0
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 10/121 (8%)
Frame = -1

Query: 385 DECVVCKDSDLSLLGKENAGIHDGMDVMSNTCEI------NAAIQGVGQPTTLDHEE*EV 224
DE VVC S +S G N G + + + NT ++ NA ++G +
Sbjct: 203 DENVVCCTSMIS--GYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGET------A 254

Query: 223 KVKLACFDLMQVEKVSPNAHTSASILKACA--TSKE--QVAHTEIEEKELLQSSVINSAL 56
K + + MQ PN T AS++ AC+ TS E Q H +I + + + S+L
Sbjct: 255 KRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSL 314

Query: 55 L 53
L
Sbjct: 315 L 315


>sp|Q8VYH0|PP313_ARATH Pentatricopeptide repeat-containing protein
At4g15720 OS=Arabidopsis thaliana GN=PCMP-H1 PE=2 SV=1
Length = 616

Score = 30.4 bits (67), Expect = 5.0
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Frame = -1

Query: 214 LACFDLMQVEK-VSPNAHTSASILKACATSKE----QVAHTEIEEKELLQSSVINSALL 53
L+ F M ++ V PN +T AS+ KAC+ E + H +E L ++ V++S+L+
Sbjct: 115 LSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLV 173


>sp|P31973|FENR_SYNP2 Ferredoxin--NADP reductase OS=Synechococcus
sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=petH PE=1
SV=1
Length = 402

Score = 30.4 bits (67), Expect = 5.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1

Query: 484 GLMPIWHEKHGEPHKLAIRHVEQDRHNSM 398
G++P +K+G+PHKL + + RH M
Sbjct: 163 GIIPPGEDKNGKPHKLRLYSIASTRHGDM 191


>sp|Q5E9Y5|DOM3Z_BOVIN Protein Dom3Z OS=Bos taurus GN=DOM3Z PE=2
SV=1
Length = 397

Score = 30.4 bits (67), Expect = 5.0
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = +1

Query: 37 PLEFSPTMHC*SPSSAKALFPQSLYELPVPLKLHMPSRWKQTCEH 171
PL FS + C P + P EL ++H P +WK H
Sbjct: 228 PLLFSGEVDCTDPQAPSTQPPTCYVELKTSKEMHSPGQWKSFYRH 272


tr_hit_id A8N4A5
Definition tr|A8N4A5|A8N4A5_COPC7 Predicted protein OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003)
Align length 75
Score (bit) 37.4
E-value 0.43
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919123|Adiantum capillus-veneris mRNA, clone:
YMU001_000121_E03.
(511 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A8N4A5|A8N4A5_COPC7 Predicted protein OS=Coprinopsis cinerea ... 37 0.43
tr|Q4UC39|Q4UC39_THEAN Putative uncharacterized protein OS=Theil... 37 0.74
tr|Q4MZV7|Q4MZV7_THEPA Putative uncharacterized protein OS=Theil... 36 0.96
tr|B4IGC5|B4IGC5_DROSE GM17671 OS=Drosophila sechellia GN=GM1767... 35 1.6
tr|A7P9U0|A7P9U0_VITVI Chromosome chr14 scaffold_9, whole genome... 35 2.1
tr|A5BE39|A5BE39_VITVI Putative uncharacterized protein OS=Vitis... 35 2.1
tr|A2Q1P5|A2Q1P5_MEDTR Tetratricopeptide-like helical (Fragment)... 35 2.1
tr|B4K720|B4K720_DROMO GI22850 OS=Drosophila mojavensis GN=GI228... 35 2.1
tr|A7PEX7|A7PEX7_VITVI Chromosome chr11 scaffold_13, whole genom... 35 2.8
tr|A5BUK5|A5BUK5_VITVI Putative uncharacterized protein OS=Vitis... 35 2.8
tr|A7S2E2|A7S2E2_NEMVE Predicted protein OS=Nematostella vectens... 35 2.8
tr|Q29A23|Q29A23_DROPS GA22053 OS=Drosophila pseudoobscura pseud... 34 3.7
tr|B4G3S8|B4G3S8_DROPE GL23068 OS=Drosophila persimilis GN=GL230... 34 3.7
tr|B0D2H4|B0D2H4_LACBS Predicted protein OS=Laccaria bicolor (st... 34 4.7
tr|Q1KSA8|Q1KSA8_SORBI Putative uncharacterized protein OS=Sorgh... 34 4.8
tr|A5AP42|A5AP42_VITVI Putative uncharacterized protein OS=Vitis... 34 4.8
tr|B4L7X0|B4L7X0_DROMO GI11033 OS=Drosophila mojavensis GN=GI110... 34 4.8
tr|A7NYH7|A7NYH7_VITVI Chromosome chr6 scaffold_3, whole genome ... 33 6.2
tr|B4R4P0|B4R4P0_DROSI GD17167 OS=Drosophila simulans GN=GD17167... 33 6.2
tr|B4M540|B4M540_DROVI GJ11051 OS=Drosophila virilis GN=GJ11051 ... 33 6.2
tr|B4KMS8|B4KMS8_DROMO GI20162 OS=Drosophila mojavensis GN=GI201... 33 6.2
tr|Q2H5L5|Q2H5L5_CHAGB Predicted protein OS=Chaetomium globosum ... 33 6.2
tr|Q47TA2|Q47TA2_THEFY Surface protein from Gram-positive cocci,... 33 8.1
tr|O64535|O64535_ARATH YUP8H12R.22 protein OS=Arabidopsis thalia... 33 8.1
tr|Q5DAV3|Q5DAV3_SCHJA Putative uncharacterized protein OS=Schis... 33 8.1
tr|Q29GW5|Q29GW5_DROPS GA14302 OS=Drosophila pseudoobscura pseud... 33 8.1
tr|B4GV27|B4GV27_DROPE GL13083 OS=Drosophila persimilis GN=GL130... 33 8.1

>tr|A8N4A5|A8N4A5_COPC7 Predicted protein OS=Coprinopsis cinerea
(strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_13334 PE=4
SV=1
Length = 385

Score = 37.4 bits (85), Expect = 0.43
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +1

Query: 205 NTPA*PSLPTPHGPEWLVAQPLVLQHLFHKC*T*HPY--HHEYRHSLYLAKTSHYPCKPH 378
+TP P P P P+ + HL + HPY HH + H + HYP PH
Sbjct: 168 STPTYP--PPPGSPDLGAPASPTIAHLQQQ----HPYPFHHHHHHPA----SPHYPASPH 217

Query: 379 THHKSNTYCYVYLAL 423
+H+ S+ + + L+L
Sbjct: 218 SHYHSHYHSHAALSL 232


>tr|Q4UC39|Q4UC39_THEAN Putative uncharacterized protein
OS=Theileria annulata GN=TA04350 PE=4 SV=1
Length = 559

Score = 36.6 bits (83), Expect = 0.74
Identities = 28/79 (35%), Positives = 36/79 (45%)
Frame = -1

Query: 307 VMSNTCEINAAIQGVGQPTTLDHEE*EVKVKLACFDLMQVEKVSPNAHTSASILKACATS 128
V NT I+G GQ LD + F LMQ + V PN T SI+ ACA
Sbjct: 207 VKPNTIMYTTLIKGYGQNKQLDKA-------MRIFRLMQQDGVEPNTVTYNSIIDACARV 259

Query: 127 KEQVAHTEIEEKELLQSSV 71
E + T + E E+L S +
Sbjct: 260 GEMGSATRLLE-EMLSSGI 277


>tr|Q4MZV7|Q4MZV7_THEPA Putative uncharacterized protein
OS=Theileria parva GN=TP03_0402 PE=4 SV=1
Length = 596

Score = 36.2 bits (82), Expect = 0.96
Identities = 27/79 (34%), Positives = 36/79 (45%)
Frame = -1

Query: 307 VMSNTCEINAAIQGVGQPTTLDHEE*EVKVKLACFDLMQVEKVSPNAHTSASILKACATS 128
V NT I+G GQ LD + F LMQ + V PN T S++ ACA
Sbjct: 236 VKPNTIMYTTLIKGYGQNKQLDKA-------MRIFRLMQQDGVQPNTVTYNSVIDACARV 288

Query: 127 KEQVAHTEIEEKELLQSSV 71
E + T + E E+L S +
Sbjct: 289 GEMNSATRLLE-EMLSSGI 306


>tr|B4IGC5|B4IGC5_DROSE GM17671 OS=Drosophila sechellia GN=GM17671
PE=4 SV=1
Length = 2027

Score = 35.4 bits (80), Expect = 1.6
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1

Query: 196 SNQNTPA*PSLPTPHGPEWLVAQPLVLQHLFHKC*T*HPYHHEYRHSLYLAKT-SHYPCK 372
S NTPA S + G Q QH H+ H Y H +H+ + A + SH+P
Sbjct: 85 SGINTPATASTSSSSGNSLTPQQQQQQQHPHHQSHHGHHYAHHQQHTHHHAPSHSHHP-H 143

Query: 373 PHTHHKSNTYCYV 411
PH H S++Y ++
Sbjct: 144 PHPHGHSHSYSHL 156


>tr|A7P9U0|A7P9U0_VITVI Chromosome chr14 scaffold_9, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00037848001
PE=4 SV=1
Length = 885

Score = 35.0 bits (79), Expect = 2.1
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = -1

Query: 214 LACFDLMQVEKVSPNAHTSASILKACATS----KEQVAHTEIEEKELLQSSVINSALL 53
L FD M VE + PN T AS+L ACA S + H +EEK + ++ +AL+
Sbjct: 264 LELFDQMIVEGLEPNGATLASVLSACAQSGCLDLGERIHVFMEEKGIEVGVILGTALV 321


>tr|A5BE39|A5BE39_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_013371 PE=4 SV=1
Length = 476

Score = 35.0 bits (79), Expect = 2.1
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = -1

Query: 214 LACFDLMQVEKVSPNAHTSASILKACATS----KEQVAHTEIEEKELLQSSVINSALL 53
L FD M VE + PN T AS+L ACA S + H +EEK + ++ +AL+
Sbjct: 214 LELFDQMIVEGLEPNGATLASVLSACAQSGCLDLGERIHVFMEEKGIEVGVILGTALV 271


>tr|A2Q1P5|A2Q1P5_MEDTR Tetratricopeptide-like helical (Fragment)
OS=Medicago truncatula GN=MtrDRAFT_AC148971g26v2 PE=4
SV=1
Length = 460

Score = 35.0 bits (79), Expect = 2.1
Identities = 25/64 (39%), Positives = 30/64 (46%)
Frame = -1

Query: 325 IHDGMDVMSNTCEINAAIQGVGQPTTLDHEE*EVKVKLACFDLMQVEKVSPNAHTSASIL 146
+ D M+V N A I G D V LAC+ MQVE VSPN T ++L
Sbjct: 229 VFDEMEV-KNEVSWTAVISGCANNQDYD-------VALACYREMQVEGVSPNRVTLIALL 280

Query: 145 KACA 134
ACA
Sbjct: 281 AACA 284


>tr|B4K720|B4K720_DROMO GI22850 OS=Drosophila mojavensis GN=GI22850
PE=4 SV=1
Length = 773

Score = 35.0 bits (79), Expect = 2.1
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Frame = -1

Query: 301 SNTCEINAAIQGVGQPTTLDHEE*EVKVKLACFDLMQVEKVSPNAHTSASILKACATSKE 122
SN E A QGV +P TLD E E V++ + Q+E V A ++ +A +E
Sbjct: 177 SNNNEQTEAAQGVREPKTLDAEANEAPVQVE--EAKQIENVEQPAKEEIAV-EAEQVKEE 233

Query: 121 QVAHTE--IEEKELLQSSVINSALLAKT 44
+ A TE E+KE Q +N +A++
Sbjct: 234 KTAETETAAEKKENEQPLAVNQPEVAES 261


>tr|A7PEX7|A7PEX7_VITVI Chromosome chr11 scaffold_13, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00016827001
PE=4 SV=1
Length = 618

Score = 34.7 bits (78), Expect = 2.8
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Frame = -1

Query: 214 LACFDLMQVEKVSPNAHTSASILKACA----TSKEQVAHTEIEEKELLQSSVINSALL-- 53
+A F MQ+++VSP+ T ++L CA + + H I+E +++ +V+ +AL+
Sbjct: 306 VALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGTALIEM 365

Query: 52 -AKTQEVPSGLSICNAI 5
AK + L I N +
Sbjct: 366 YAKCGFIEKSLEIFNGL 382


>tr|A5BUK5|A5BUK5_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_032470 PE=4 SV=1
Length = 694

Score = 34.7 bits (78), Expect = 2.8
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Frame = -1

Query: 310 DVMSNTCEINAAIQGVGQPTTLDHEE*EVKVKLACFDLMQVEKVSPNAHTSASILKACAT 131
DV+S I A +QG G P + L F M+ + V PN T +L ACA
Sbjct: 201 DVVSWNSMITAFVQG-GCP----------EEALELFQEMETQNVKPNGITMVGVLSACAK 249

Query: 130 SKE----QVAHTEIEEKELLQSSVINSALL 53
+ + H+ IE + +S +++A+L
Sbjct: 250 KSDFEFGRWVHSYIERNRIXESLTLSNAML 279