BP919124 |
Clone id |
YMU001_000121_E04 |
Library |
YMU01 |
Length |
456 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000121_E04. |
Accession |
BP919124 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GTGACCAAAGGCTAGGCCACCTACAAAATGGGAAGTGTTTGCTCAAAAGAAAGGTATCCA AAAGAGGAAACGAAGTAAGCTCGAGTTTGATGAGCCGAACCAGGAATGGCGACGTCGCTA TGGCTATAAGAGAGTCAGGGATGAGAGAGATATTCCCATAATTGATGCAAAGTCATCTGA TGAATTGGGTACGGATCCCTTTGCACAGAGGTTAGCTGAAAAGAAGTCCCATATAGCAAA GGAAGCCAAAAATCAGTTGGAAAACCTGAAAAGGGCAGCAAAGGTTGGTGGCAAGGGGGC ACTACCAAGTACTCTGCAGTTGTCTGCAACTAGTTTGCCAATAACTGGCACAAAATAACT TCCGAAAAAGATTAGCAAAGGTGAGATAGGCTTTGCGGCAGGCCTCGCAGGTACTTCAAC TGCAAGTGGTGGAAAATTCGATCGCAAACGGGATGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SH88 |
Definition |
sp|Q9SH88|RRS1_ARATH Ribosome biogenesis regulatory protein homolog OS=Arabidopsis thaliana |
Align length |
148 |
Score (bit) |
162.0 |
E-value |
8.0e-40 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TBA8 |
Definition |
tr|A9TBA8|A9TBA8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
148 |
Score (bit) |
183.0 |
E-value |
3.0e-45 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919124|Adiantum capillus-veneris mRNA, clone: YMU001_000121_E04. (456 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TBA8|A9TBA8_PHYPA Predicted protein OS=Physcomitrella paten... 183 3e-45 tr|B8LLV5|B8LLV5_PICSI Putative uncharacterized protein OS=Picea... 177 2e-43 tr|Q0WWN4|Q0WWN4_ARATH Putative uncharacterized protein At2g3799... 162 1e-38 tr|A7PZT8|A7PZT8_VITVI Chromosome chr15 scaffold_40, whole genom... 161 2e-38 tr|Q7XPU3|Q7XPU3_ORYSJ Os04g0685100 protein OS=Oryza sativa subs... 160 2e-38 tr|A3AYT6|A3AYT6_ORYSJ Putative uncharacterized protein OS=Oryza... 160 2e-38 tr|B4FD87|B4FD87_MAIZE Putative uncharacterized protein OS=Zea m... 157 2e-37 tr|A5CBT4|A5CBT4_VITVI Putative uncharacterized protein OS=Vitis... 153 5e-36 tr|A7PXS1|A7PXS1_VITVI Chromosome chr15 scaffold_37, whole genom... 123 5e-27 tr|Q259U7|Q259U7_ORYSA H0913C04.9 protein OS=Oryza sativa GN=H09... 119 6e-26 tr|Q6NWD5|Q6NWD5_DANRE Rrs1 protein (Fragment) OS=Danio rerio GN... 102 1e-20 tr|Q7SX91|Q7SX91_DANRE RRS1 ribosome biogenesis regulator homolo... 101 2e-20 tr|A4S7C9|A4S7C9_OSTLU Predicted protein (Fragment) OS=Ostreococ... 100 5e-20 tr|Q4T5Y9|Q4T5Y9_TETNG Chromosome 6 SCAF9026, whole genome shotg... 98 2e-19 tr|Q6IP37|Q6IP37_XENLA MGC78981 protein OS=Xenopus laevis GN=rrs... 96 1e-18 tr|B2GU10|B2GU10_XENTR LOC100158478 protein OS=Xenopus tropicali... 95 2e-18 tr|A8KBQ7|A8KBQ7_DANRE Rrs1 protein OS=Danio rerio GN=rrs1 PE=2 ... 95 2e-18 tr|B5XEG4|B5XEG4_SALSA Ribosome biogenesis regulatory protein ho... 95 2e-18 tr|Q5XGX6|Q5XGX6_XENLA Rrs1 protein OS=Xenopus laevis GN=rrs1 PE... 94 3e-18 tr|B6NDR6|B6NDR6_BRAFL Putative uncharacterized protein OS=Branc... 93 6e-18 tr|B6L0V2|B6L0V2_BRAFL Putative uncharacterized protein OS=Branc... 93 6e-18 tr|Q00V40|Q00V40_OSTTA OSJNBa0088H09.13 [Oryza sativa (ISS) OS=O... 93 8e-18 tr|Q5VSC5|Q5VSC5_ORYSJ Os06g0142000 protein OS=Oryza sativa subs... 91 2e-17 tr|B8B2C5|B8B2C5_ORYSI Putative uncharacterized protein OS=Oryza... 91 2e-17 tr|B8ART1|B8ART1_ORYSI Putative uncharacterized protein OS=Oryza... 87 3e-16 tr|Q80U76|Q80U76_MOUSE MKIAA0112 protein (Fragment) OS=Mus muscu... 87 4e-16 tr|B3RMZ7|B3RMZ7_TRIAD Putative uncharacterized protein OS=Trich... 82 1e-14 tr|A8WY26|A8WY26_CAEBR Putative uncharacterized protein OS=Caeno... 79 1e-13 tr|A2E515|A2E515_TRIVA Putative uncharacterized protein OS=Trich... 78 3e-13 tr|A8BZ40|A8BZ40_GIALA Putative uncharacterized protein OS=Giard... 77 4e-13
>tr|A9TBA8|A9TBA8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_169101 PE=4 SV=1 Length = 358
Score = 183 bits (465), Expect = 3e-45 Identities = 93/148 (62%), Positives = 108/148 (72%) Frame = +2
Query: 5 PKARPPTKWEVFAQKKGIQKRKRSKLEFDEPNQEWRRRYGYKRVRDERDIPIIDAKSSDE 184 PK RP TKWE FAQ KGI+KRKRSKLEFDE +EWRRR+GYKRV DE DIPII+AK+ DE Sbjct: 95 PKPRPMTKWEAFAQTKGIKKRKRSKLEFDEGKEEWRRRHGYKRVNDENDIPIIEAKAGDE 154
Query: 185 LGTDPFAQRLAEKKSHIAKEAKNQLENLKRAAKVGGKGALPSTLQLSATSLPITGTK*LP 364 G DPF + KK +AK+ KNQLENLKRAAK GGKGALPSTLQL+ATSL +TG K Sbjct: 155 PGEDPFLKLRESKKERVAKQDKNQLENLKRAAKQGGKGALPSTLQLAATSLAVTGGKQPG 214
Query: 365 KKISKGEIGFXXXXXXXXXXXXXKFDRK 448 +K+SK ++G KFD+K Sbjct: 215 QKLSKNDLGDAAGLASTATASIGKFDKK 242
>tr|B8LLV5|B8LLV5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 343
Score = 177 bits (449), Expect = 2e-43 Identities = 87/148 (58%), Positives = 110/148 (74%) Frame = +2
Query: 5 PKARPPTKWEVFAQKKGIQKRKRSKLEFDEPNQEWRRRYGYKRVRDERDIPIIDAKSSDE 184 PKA+PPTKWEVFAQ KGI+KRKRSK +DEP+ EW+RR+GY R DE DIPII+AK +DE Sbjct: 87 PKAKPPTKWEVFAQSKGIKKRKRSKHLYDEPSGEWKRRHGYNRAGDENDIPIIEAKPTDE 146
Query: 185 LGTDPFAQRLAEKKSHIAKEAKNQLENLKRAAKVGGKGALPSTLQLSATSLPITGTK*LP 364 G DPF+++ EKK+ + K K+QLENLK+AAKV GALPST+QL+ATSLPITGT+ +P Sbjct: 147 PGEDPFSKKKTEKKARVQKNEKSQLENLKKAAKV---GALPSTVQLAATSLPITGTRDIP 203
Query: 365 KKISKGEIGFXXXXXXXXXXXXXKFDRK 448 KK+ K ++G KFD + Sbjct: 204 KKVGKDDLGHAAGFASSATASVGKFDER 231
>tr|Q0WWN4|Q0WWN4_ARATH Putative uncharacterized protein At2g37990 OS=Arabidopsis thaliana GN=At2g37990 PE=2 SV=1 Length = 318
Score = 162 bits (409), Expect = 1e-38 Identities = 81/148 (54%), Positives = 104/148 (70%) Frame = +2
Query: 5 PKARPPTKWEVFAQKKGIQKRKRSKLEFDEPNQEWRRRYGYKRVRDERDIPIIDAKSSDE 184 P+ +PPTKWE FA KKGIQKRK+ K+ +DE +++RR+GY RV D+ D+PII+AK SDE Sbjct: 86 PRPKPPTKWEEFALKKGIQKRKKEKVVWDEQTNQFKRRHGYDRVNDDNDVPIIEAKESDE 145
Query: 185 LGTDPFAQRLAEKKSHIAKEAKNQLENLKRAAKVGGKGALPSTLQLSATSLPITGTK*LP 364 G DPFA+RL +KK + K+ KN+L+NLK A K GALPS +QL+ATSLPI+GTK P Sbjct: 146 PGVDPFAKRLDDKKKRVGKQEKNRLQNLKAAEKA---GALPSHVQLAATSLPISGTKAQP 202
Query: 365 KKISKGEIGFXXXXXXXXXXXXXKFDRK 448 KKI K E+G KFD+K Sbjct: 203 KKIGKDELGDVAGLAATSTASGGKFDKK 230
>tr|A7PZT8|A7PZT8_VITVI Chromosome chr15 scaffold_40, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027004001 PE=4 SV=1 Length = 331
Score = 161 bits (407), Expect = 2e-38 Identities = 80/148 (54%), Positives = 104/148 (70%) Frame = +2
Query: 5 PKARPPTKWEVFAQKKGIQKRKRSKLEFDEPNQEWRRRYGYKRVRDERDIPIIDAKSSDE 184 PK +PPTKWE+FA+ KGI+ RK+ K+ +DE W+RR+GY RV D++DIPII+AK +DE Sbjct: 84 PKPKPPTKWELFAKAKGIKNRKKDKIVYDEQTGTWKRRHGYDRVNDDKDIPIIEAKMTDE 143
Query: 185 LGTDPFAQRLAEKKSHIAKEAKNQLENLKRAAKVGGKGALPSTLQLSATSLPITGTK*LP 364 G DPF +R AEKK + K KN+L+NLK+AAKV GALPS +QL+AT+LPITGT+ P Sbjct: 144 PGEDPFVKRQAEKKKRVEKHEKNRLQNLKQAAKV---GALPSHIQLAATALPITGTQAAP 200
Query: 365 KKISKGEIGFXXXXXXXXXXXXXKFDRK 448 KK SK E+ KFD+K Sbjct: 201 KKASKNELQDIASMAAAATASGGKFDKK 228
>tr|Q7XPU3|Q7XPU3_ORYSJ Os04g0685100 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0088H09.13 PE=4 SV=1 Length = 330
Score = 160 bits (406), Expect = 2e-38 Identities = 82/149 (55%), Positives = 105/149 (70%), Gaps = 1/149 (0%) Frame = +2
Query: 5 PKARPPTKWEVFAQKKGIQKRKRSKLEFDEPNQEWRRRYGYKRVRDERDIPIIDAKSSDE 184 P+ +PPTKWE FA+ KGI K K++K E+DE Q W+R YGY RV D++DIPII+AK++DE Sbjct: 91 PRPKPPTKWEQFAKMKGITKHKKNKREWDEQTQTWKRTYGYDRVNDDKDIPIIEAKATDE 150
Query: 185 LGTDPFAQRLAEKKSHIAKEAKNQLENLKRAAKVGGKGALPSTLQLSATSLPITGTK-*L 361 G DPFAQR +KK H+ K+ KN+LENLK+AAKV GALPS +QL+AT+LPITGTK + Sbjct: 151 PGVDPFAQRREDKKKHVEKQEKNRLENLKKAAKV---GALPSHIQLAATALPITGTKADI 207
Query: 362 PKKISKGEIGFXXXXXXXXXXXXXKFDRK 448 PKK K ++ KFD K Sbjct: 208 PKKSRKKDLEDVAGMASSATASGGKFDEK 236
>tr|A3AYT6|A3AYT6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_015958 PE=4 SV=1 Length = 356
Score = 160 bits (406), Expect = 2e-38 Identities = 82/149 (55%), Positives = 105/149 (70%), Gaps = 1/149 (0%) Frame = +2
Query: 5 PKARPPTKWEVFAQKKGIQKRKRSKLEFDEPNQEWRRRYGYKRVRDERDIPIIDAKSSDE 184 P+ +PPTKWE FA+ KGI K K++K E+DE Q W+R YGY RV D++DIPII+AK++DE Sbjct: 117 PRPKPPTKWEQFAKMKGITKHKKNKREWDEQTQTWKRTYGYDRVNDDKDIPIIEAKATDE 176
Query: 185 LGTDPFAQRLAEKKSHIAKEAKNQLENLKRAAKVGGKGALPSTLQLSATSLPITGTK-*L 361 G DPFAQR +KK H+ K+ KN+LENLK+AAKV GALPS +QL+AT+LPITGTK + Sbjct: 177 PGVDPFAQRREDKKKHVEKQEKNRLENLKKAAKV---GALPSHIQLAATALPITGTKADI 233
Query: 362 PKKISKGEIGFXXXXXXXXXXXXXKFDRK 448 PKK K ++ KFD K Sbjct: 234 PKKSRKKDLEDVAGMASSATASGGKFDEK 262
>tr|B4FD87|B4FD87_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 330
Score = 157 bits (398), Expect = 2e-37 Identities = 81/149 (54%), Positives = 104/149 (69%), Gaps = 1/149 (0%) Frame = +2
Query: 5 PKARPPTKWEVFAQKKGIQKRKRSKLEFDEPNQEWRRRYGYKRVRDERDIPIIDAKSSDE 184 PK +PPTKWE+FA+ KGI KRK++K E+DE Q W+R YGY RV D++D+PI++AK +DE Sbjct: 91 PKPKPPTKWELFAKAKGITKRKKNKREWDEQTQSWKRTYGYDRVNDDKDVPILEAKLTDE 150
Query: 185 LGTDPFAQRLAEKKSHIAKEAKNQLENLKRAAKVGGKGALPSTLQLSATSLPITGTK-*L 361 G DPFAQR EKK + K+ K++LENLK+AAKV GALPS +QL+A +LPITGTK L Sbjct: 151 PGVDPFAQRRDEKKKRVEKQEKSRLENLKKAAKV---GALPSHIQLAAKALPITGTKADL 207
Query: 362 PKKISKGEIGFXXXXXXXXXXXXXKFDRK 448 PKK K ++ KFD K Sbjct: 208 PKKSRKEDLESVVGMASSATASGGKFDEK 236
>tr|A5CBT4|A5CBT4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033191 PE=4 SV=1 Length = 327
Score = 153 bits (386), Expect = 5e-36 Identities = 78/148 (52%), Positives = 102/148 (68%) Frame = +2
Query: 5 PKARPPTKWEVFAQKKGIQKRKRSKLEFDEPNQEWRRRYGYKRVRDERDIPIIDAKSSDE 184 PK +PPTKWE+FA+ KGI+ RK+ K+ +DE W+RR+GY RV D++D PII+AK +D Sbjct: 81 PKPKPPTKWELFAKAKGIKNRKKDKIVYDEQTGTWKRRHGYDRVNDDKDXPIIEAKMTD- 139
Query: 185 LGTDPFAQRLAEKKSHIAKEAKNQLENLKRAAKVGGKGALPSTLQLSATSLPITGTK*LP 364 G DPF +R AEKK + K KN+L+NLK+AAKV GALPS +QL+AT+LPITGT+ P Sbjct: 140 AGEDPFXKRQAEKKKRVEKHEKNRLQNLKQAAKV---GALPSHIQLAATALPITGTQAAP 196
Query: 365 KKISKGEIGFXXXXXXXXXXXXXKFDRK 448 KK SK E+ KFD+K Sbjct: 197 KKASKNELQDIASMAAAATASGGKFDKK 224
>tr|A7PXS1|A7PXS1_VITVI Chromosome chr15 scaffold_37, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026150001 PE=4 SV=1 Length = 207
Score = 123 bits (308), Expect = 5e-27 Identities = 59/101 (58%), Positives = 77/101 (76%) Frame = +2
Query: 5 PKARPPTKWEVFAQKKGIQKRKRSKLEFDEPNQEWRRRYGYKRVRDERDIPIIDAKSSDE 184 PK +PPTKWE+FA+ KGI+ RK+ K+ +DE W+RR+GY RV D+ DIPII+AK +D Sbjct: 81 PKPKPPTKWELFAKAKGIKNRKKDKIVYDEQTGTWKRRHGYDRVNDDEDIPIIEAKMTD- 139
Query: 185 LGTDPFAQRLAEKKSHIAKEAKNQLENLKRAAKVGGKGALP 307 G DPFA+R AEKK + K+ KN+L+NLK+AAKV GALP Sbjct: 140 AGEDPFAKRRAEKKKRVEKQGKNRLQNLKQAAKV---GALP 177
>tr|Q259U7|Q259U7_ORYSA H0913C04.9 protein OS=Oryza sativa GN=H0913C04.9 PE=4 SV=1 Length = 332
Score = 119 bits (299), Expect = 6e-26 Identities = 66/149 (44%), Positives = 85/149 (57%), Gaps = 1/149 (0%) Frame = +2
Query: 5 PKARPPTKWEVFAQKKGIQKRKRSKLEFDEPNQEWRRRYGYKRVRDERDIPIIDAKSSDE 184 P+ +PPTKWE FA+ KGI K K++K E+DE Q W+R YGY RV D++DIPII+AK++DE Sbjct: 117 PRPKPPTKWEQFAKMKGITKHKKNKREWDEQTQTWKRTYGYDRVNDDKDIPIIEAKATDE 176
Query: 185 LGTDPFAQRLAEKKSHIAKEAKNQLENLKRAAKVGGKGALPSTLQLSATSLPITGTK-*L 361 G DPFAQR +KK+HI QL+AT+LPITGTK + Sbjct: 177 PGVDPFAQRREDKKNHI---------------------------QLAATALPITGTKADI 209
Query: 362 PKKISKGEIGFXXXXXXXXXXXXXKFDRK 448 PKK K ++ KFD K Sbjct: 210 PKKSRKKDLEDVAGMASSATASGGKFDEK 238
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